RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 TRDCB7Z8K6 153 aa8.09□□□□□ -1.11
GTF3C1-213ENST00000571886 FGF16O43320 207 aa8.09□□□□□ -1.11
GTF3C1-213ENST00000571886 PEX14O75381 377 aa8.09□□□□□ -1.11
GTF3C1-213ENST00000571886 RGS11O94810 467 aa8.09□□□□□ -1.11
GTF3C1-213ENST00000571886 MOSP00540 346 aa8.09□□□□□ -1.11
GTF3C1-213ENST00000571886 FCGR3AP08637 254 aa8.09□□□□□ -1.11
GTF3C1-213ENST00000571886 HIST1H1DP16402 221 aaKnown RBP8.09□□□□□ -1.11
GTF3C1-213ENST00000571886 C2orf68Q2NKX9 166 aa8.09□□□□□ -1.11
GTF3C1-213ENST00000571886 IGSF11Q5DX21 431 aa8.09□□□□□ -1.11
GTF3C1-213ENST00000571886 GLDNQ6ZMI3 551 aaPredicted RBP8.09□□□□□ -1.11
GTF3C1-213ENST00000571886 MOB1BQ7L9L4 216 aa8.09□□□□□ -1.11
GTF3C1-213ENST00000571886 ZNF329Q86UD4 541 aa8.09□□□□□ -1.11
GTF3C1-213ENST00000571886 LGALS14Q8TCE9 139 aa8.09□□□□□ -1.11
GTF3C1-213ENST00000571886 PTX4Q96A99 478 aa8.09□□□□□ -1.11
GTF3C1-213ENST00000571886 AGMATQ9BSE5 352 aa8.09□□□□□ -1.11
GTF3C1-213ENST00000571886 C12orf4Q9NQ89 552 aa8.09□□□□□ -1.11
GTF3C1-213ENST00000571886 A0A087WXM4 84 aa8.08□□□□□ -1.12
GTF3C1-213ENST00000571886 M0QZK8 103 aa8.08□□□□□ -1.12
GTF3C1-213ENST00000571886 KCNAB3O43448 404 aa8.08□□□□□ -1.12
GTF3C1-213ENST00000571886 IGHG2P01859 326 aa8.08□□□□□ -1.12
GTF3C1-213ENST00000571886 CT45A6P0DMU7 189 aa8.08□□□□□ -1.12
GTF3C1-213ENST00000571886 CT45A5P0DMU8 189 aa8.08□□□□□ -1.12
GTF3C1-213ENST00000571886 CT45A7P0DMV0 189 aa8.08□□□□□ -1.12
GTF3C1-213ENST00000571886 LSM3P62310 102 aaKnown RBP8.08□□□□□ -1.12
GTF3C1-213ENST00000571886 ZNF260Q3ZCT1 412 aa8.08□□□□□ -1.12
GTF3C1-213ENST00000571886 CDNFQ49AH0 187 aa8.08□□□□□ -1.12
GTF3C1-213ENST00000571886 IDNKQ5T6J7 187 aa8.08□□□□□ -1.12
GTF3C1-213ENST00000571886 NDUFA11Q86Y39 141 aa8.08□□□□□ -1.12
GTF3C1-213ENST00000571886 C1QL4Q86Z23 238 aa8.08□□□□□ -1.12
GTF3C1-213ENST00000571886 OR2AK2Q8NG84 335 aa8.08□□□□□ -1.12
GTF3C1-213ENST00000571886 S1PR3Q99500 378 aa8.08□□□□□ -1.12
GTF3C1-213ENST00000571886 HSPB9Q9BQS6 159 aa8.08□□□□□ -1.12
GTF3C1-213ENST00000571886 ABCG5Q9H222 651 aa8.08□□□□□ -1.12
GTF3C1-213ENST00000571886 DPPA5A6NC42 116 aa8.07□□□□□ -1.12
GTF3C1-213ENST00000571886 METTL21EPA6NDL7 271 aa8.07□□□□□ -1.12
GTF3C1-213ENST00000571886 SERPINE3A8MV23 424 aa8.07□□□□□ -1.12
GTF3C1-213ENST00000571886 ITGB1BP1O14713 200 aa8.07□□□□□ -1.12
GTF3C1-213ENST00000571886 RAB29O14966 203 aa8.07□□□□□ -1.12
GTF3C1-213ENST00000571886 FABP7O15540 132 aa8.07□□□□□ -1.12
GTF3C1-213ENST00000571886 HSPA12AO43301 675 aa8.07□□□□□ -1.12
GTF3C1-213ENST00000571886 TXNL1O43396 289 aa8.07□□□□□ -1.12
GTF3C1-213ENST00000571886 TNFAIP8O95379 198 aa8.07□□□□□ -1.12
GTF3C1-213ENST00000571886 SMIM18P0DKX4 95 aa8.07□□□□□ -1.12
GTF3C1-213ENST00000571886 ZBTB25P24278 435 aa8.07□□□□□ -1.12
GTF3C1-213ENST00000571886 RPS19P39019 145 aaKnown RBP8.07□□□□□ -1.12
GTF3C1-213ENST00000571886 RANBP1P43487 201 aa8.07□□□□□ -1.12
GTF3C1-213ENST00000571886 ARFRP1Q13795 201 aa8.07□□□□□ -1.12
GTF3C1-213ENST00000571886 C18orf65Q6ZTR6 163 aa8.07□□□□□ -1.12
GTF3C1-213ENST00000571886 SLC35E3Q7Z769 313 aa8.07□□□□□ -1.12
GTF3C1-213ENST00000571886 FAM71E2Q8N5Q1 922 aa8.07□□□□□ -1.12
GTF3C1-213ENST00000571886 DRAXINQ8NBI3 349 aaPredicted RBP8.07□□□□□ -1.12
GTF3C1-213ENST00000571886 SLC25A38Q96DW6 304 aa8.07□□□□□ -1.12
GTF3C1-213ENST00000571886 C5orf30Q96GV9 206 aa8.07□□□□□ -1.12
GTF3C1-213ENST00000571886 TOLLIPQ9H0E2 274 aa8.07□□□□□ -1.12
GTF3C1-213ENST00000571886 RDH8Q9NYR8 311 aa8.07□□□□□ -1.12
GTF3C1-213ENST00000571886 NDUFA13Q9P0J0 144 aa8.07□□□□□ -1.12
GTF3C1-213ENST00000571886 PIPOXQ9P0Z9 390 aa8.07□□□□□ -1.12
GTF3C1-213ENST00000571886 MGAT4AQ9UM21 535 aa8.07□□□□□ -1.12
GTF3C1-213ENST00000571886 TRBV6-7A0A0A0MS04 114 aa8.06□□□□□ -1.12
GTF3C1-213ENST00000571886 TCRBV4S1A1TA0A5B7 111 aa8.06□□□□□ -1.12
GTF3C1-213ENST00000571886 PSMB11A5LHX3 300 aa8.06□□□□□ -1.12
GTF3C1-213ENST00000571886 TMEM235A6NFC5 223 aa8.06□□□□□ -1.12
GTF3C1-213ENST00000571886 H0YJW9 148 aa8.06□□□□□ -1.12
GTF3C1-213ENST00000571886 BET1O15155 118 aa8.06□□□□□ -1.12
GTF3C1-213ENST00000571886 WIPF1O43516 503 aa8.06□□□□□ -1.12
GTF3C1-213ENST00000571886 AIREO43918 545 aa8.06□□□□□ -1.12
GTF3C1-213ENST00000571886 SSX5O60225 188 aa8.06□□□□□ -1.12
GTF3C1-213ENST00000571886 PTHLHP12272 177 aa8.06□□□□□ -1.12
GTF3C1-213ENST00000571886 GPR12P47775 334 aa8.06□□□□□ -1.12
GTF3C1-213ENST00000571886 ACTBP60709 375 aa8.06□□□□□ -1.12
GTF3C1-213ENST00000571886 FAM131AQ6UXB0 335 aa8.06□□□□□ -1.12
GTF3C1-213ENST00000571886 STPG2Q8N412 459 aa8.06□□□□□ -1.12
GTF3C1-213ENST00000571886 OR4A4PQ8NGN8 299 aa8.06□□□□□ -1.12
GTF3C1-213ENST00000571886 NUDCD2Q8WVJ2 157 aa8.06□□□□□ -1.12
GTF3C1-213ENST00000571886 R3HDM4Q96D70 268 aa8.06□□□□□ -1.12
GTF3C1-213ENST00000571886 RASL11BQ9BPW5 248 aa8.06□□□□□ -1.12
GTF3C1-213ENST00000571886 CABLES2Q9BTV7 478 aa8.06□□□□□ -1.12
GTF3C1-213ENST00000571886 ST6GALNAC5Q9BVH7 336 aa8.06□□□□□ -1.12
GTF3C1-213ENST00000571886 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.06□□□□□ -1.12
GTF3C1-213ENST00000571886 LIN7CQ9NUP9 197 aaKnown RBP8.06□□□□□ -1.12
GTF3C1-213ENST00000571886 G3V4G9 280 aa8.05□□□□□ -1.12
GTF3C1-213ENST00000571886 J3QRK9 145 aa8.05□□□□□ -1.12
GTF3C1-213ENST00000571886 OPN1MWP04001 364 aa8.05□□□□□ -1.12
GTF3C1-213ENST00000571886 OR8U9P0C7N5 309 aa8.05□□□□□ -1.12
GTF3C1-213ENST00000571886 OPN1MW2P0DN77 364 aa8.05□□□□□ -1.12
GTF3C1-213ENST00000571886 OPN1MW3P0DN78 364 aa8.05□□□□□ -1.12
GTF3C1-213ENST00000571886 MRPS15P82914 257 aaKnown RBP8.05□□□□□ -1.12
GTF3C1-213ENST00000571886 DEFA6Q01524 100 aa8.05□□□□□ -1.12
GTF3C1-213ENST00000571886 MMDQ15546 238 aa8.05□□□□□ -1.12
GTF3C1-213ENST00000571886 HACD4Q5VWC8 232 aa8.05□□□□□ -1.12
GTF3C1-213ENST00000571886 FAM71F2Q6NXP2 309 aa8.05□□□□□ -1.12
GTF3C1-213ENST00000571886 LCNL1Q6ZST4 164 aa8.05□□□□□ -1.12
GTF3C1-213ENST00000571886 ZNF383Q8NA42 475 aa8.05□□□□□ -1.12
GTF3C1-213ENST00000571886 OR8U1Q8NH10 309 aa8.05□□□□□ -1.12
GTF3C1-213ENST00000571886 FUNDC2Q9BWH2 189 aa8.05□□□□□ -1.12
GTF3C1-213ENST00000571886 NAA50Q9GZZ1 169 aaKnown RBP8.05□□□□□ -1.12
GTF3C1-213ENST00000571886 RHBDL2Q9NX52 303 aa8.05□□□□□ -1.12
GTF3C1-213ENST00000571886 ZNF107Q9UII5 783 aaPredicted RBP8.05□□□□□ -1.12
GTF3C1-213ENST00000571886 TRAV18A0A075B6X5 111 aa8.04□□□□□ -1.12
GTF3C1-213ENST00000571886 FCN1O00602 326 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms