RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 C1orf229Q6ZS94 237 aaPredicted RBP2.99□□□□□ -1.93
SMG6-208ENST00000570874 CHMP1BQ7LBR1 199 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 ZNF550Q7Z398 422 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 MRGPREQ86SM8 312 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 COMMD7Q86VX2 200 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 VKORC1L1Q8N0U8 176 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 RFLNBQ8N5W9 214 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 ZFP41Q8N8Y5 198 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 WDR31Q8NA23 367 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 GATD1Q8NB37 220 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 UBAC2Q8NBM4 344 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 CHST4Q8NCG5 386 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 SLC30A7Q8NEW0 376 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 IL17DQ8TAD2 202 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 ZFAND1Q8TCF1 268 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 CT55Q8WUE5 264 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 C15orf40Q8WUR7 153 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 ORAOV1Q8WV07 137 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 SLC7A6Q92536 515 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 TOMM40LQ969M1 308 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 PNPLA2Q96AD5 504 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 SLC25A46Q96AG3 418 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 PIK3IP1Q96FE7 263 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 ST6GAL2Q96JF0 529 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 DNAJC30Q96LL9 226 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 PRR25Q96S07 402 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 HSPB9Q9BQS6 159 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 ULBP3Q9BZM4 244 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 POLR2J2Q9GZM3 115 aaKnown RBP2.99□□□□□ -1.93
SMG6-208ENST00000570874 TMEM126AQ9H061 195 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 MS4A6AQ9H2W1 248 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 FNDC4Q9H6D8 234 aaPredicted RBP2.99□□□□□ -1.93
SMG6-208ENST00000570874 CACYBPQ9HB71 228 aaKnown RBP2.99□□□□□ -1.93
SMG6-208ENST00000570874 ADGRL4Q9HBW9 690 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 EXOSC4Q9NPD3 245 aaKnown RBP2.99□□□□□ -1.93
SMG6-208ENST00000570874 KCNJ16Q9NPI9 418 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 RBFOX1Q9NWB1 397 aaKnown RBP2.99□□□□□ -1.93
SMG6-208ENST00000570874 NDUFB11Q9NX14 153 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 MED29Q9NX70 200 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 ELOVL5Q9NYP7 299 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 MED11Q9P086 117 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 DUX4Q9UBX2 424 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 LAMP3Q9UQV4 416 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 SIGLEC7Q9Y286 467 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 EXOSC1Q9Y3B2 195 aaKnown RBP2.99□□□□□ -1.93
SMG6-208ENST00000570874 MED31Q9Y3C7 131 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 HS3ST3B1Q9Y662 390 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 SIRT4Q9Y6E7 314 aaPredicted RBP2.99□□□□□ -1.93
SMG6-208ENST00000570874 WSB1Q9Y6I7 421 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 INTS1Q8N201 2190 aaKnown RBP2.99□□□□□ -1.93
SMG6-208ENST00000570874 OTOGLQ3ZCN5 2332 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 SVILO95425 2214 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 GPR179Q6PRD1 2367 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 PRR14LQ5THK1 2151 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 A0A0G2JMM0 328 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 A0A1B0GTH9 108 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 SPAARA0A1B0GVQ0 90 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 TRDV1A0A1B0GX56 115 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 A0A1W2PPB8 328 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 A0A1W2PRE2 83 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 A0A1W2PRS3 328 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 OR4C46A6NHA9 309 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 KIR3DP1A8MWS1 328 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 FAM90A26D6RGX4 464 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 F5H5K5 113 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 H7C1C5 153 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 I3L521 148 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 MYL12BO14950 172 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 WDR1O75083 606 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 TOXO94900 526 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 NUDT14O95848 222 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 TSPAN15O95858 294 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 GPANK1O95872 356 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 LALBAP00709 142 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 IFNA7P01567 189 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 BGLAPP02818 100 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 PLA2G1BP04054 148 aaKnown RBP2.98□□□□□ -1.93
SMG6-208ENST00000570874 MRPL3P09001 348 aaKnown RBP2.98□□□□□ -1.93
SMG6-208ENST00000570874 PSG1P11464 419 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 HIST1H1BP16401 226 aaKnown RBP2.98□□□□□ -1.93
SMG6-208ENST00000570874 KLK2P20151 261 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 PSMB1P20618 241 aaKnown RBP2.98□□□□□ -1.93
SMG6-208ENST00000570874 MYL9P24844 172 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 SHC1P29353 583 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 CHRNB4P30926 498 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 RPL4P36578 427 aaKnown RBP2.98□□□□□ -1.93
SMG6-208ENST00000570874 INPP1P49441 399 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 XGP55808 180 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 CTBP2P56545 445 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 ZNF121P58317 390 aaPredicted RBP2.98□□□□□ -1.93
SMG6-208ENST00000570874 LCN6P62502 163 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 FMODQ06828 376 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 FOXF1Q12946 379 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 ECH1Q13011 328 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 EIF2B1Q14232 305 aaKnown RBP2.98□□□□□ -1.93
SMG6-208ENST00000570874 LTC4SQ16873 150 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 C4orf26Q17RF5 130 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 ZNF791Q3KP31 576 aaPredicted RBP2.98□□□□□ -1.93
SMG6-208ENST00000570874 OCIAD2Q56VL3 154 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 ATP1A1-AS1Q5TC04 95 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms