RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 PLEKHJ1Q9NW61 149 aa6.13□□□□□ -1.43
CDH3-209ENST00000569080 SLC23A1Q9UHI7 598 aa6.13□□□□□ -1.43
CDH3-209ENST00000569080 BLOC1S6Q9UL45 172 aa6.13□□□□□ -1.43
CDH3-209ENST00000569080 IGHV7-81A0A0B4J1V7 117 aa6.12□□□□□ -1.43
CDH3-209ENST00000569080 TRAV1-2A0A0B4J238 106 aa6.12□□□□□ -1.43
CDH3-209ENST00000569080 TRDV1A0A1B0GX56 115 aa6.12□□□□□ -1.43
CDH3-209ENST00000569080 IFITM5A6NNB3 132 aa6.12□□□□□ -1.43
CDH3-209ENST00000569080 H0YJW9 148 aa6.12□□□□□ -1.43
CDH3-209ENST00000569080 RAB27BO00194 218 aa6.12□□□□□ -1.43
CDH3-209ENST00000569080 MFNGO00587 321 aa6.12□□□□□ -1.43
CDH3-209ENST00000569080 RGS11O94810 467 aa6.12□□□□□ -1.43
CDH3-209ENST00000569080 IGHG4P01861 327 aa6.12□□□□□ -1.43
CDH3-209ENST00000569080 RPLP1P05386 114 aaKnown RBP6.12□□□□□ -1.43
CDH3-209ENST00000569080 SCTP09683 121 aa6.12□□□□□ -1.43
CDH3-209ENST00000569080 CT45A6P0DMU7 189 aa6.12□□□□□ -1.43
CDH3-209ENST00000569080 CT45A5P0DMU8 189 aa6.12□□□□□ -1.43
CDH3-209ENST00000569080 CT45A7P0DMV0 189 aa6.12□□□□□ -1.43
CDH3-209ENST00000569080 SLC2A2P11168 524 aaPredicted RBP6.12□□□□□ -1.43
CDH3-209ENST00000569080 PSMB8P28062 276 aa6.12□□□□□ -1.43
CDH3-209ENST00000569080 PPIFP30405 207 aaKnown RBP6.12□□□□□ -1.43
CDH3-209ENST00000569080 SOX6P35712 828 aa6.12□□□□□ -1.43
CDH3-209ENST00000569080 VEGFCP49767 419 aa6.12□□□□□ -1.43
CDH3-209ENST00000569080 KRTAP10-11P60412 298 aa6.12□□□□□ -1.43
CDH3-209ENST00000569080 SLC35B1P78383 322 aa6.12□□□□□ -1.43
CDH3-209ENST00000569080 FOXE3Q13461 319 aa6.12□□□□□ -1.43
CDH3-209ENST00000569080 FHL3Q13643 280 aa6.12□□□□□ -1.43
CDH3-209ENST00000569080 RPL39P5Q59GN2 51 aa6.12□□□□□ -1.43
CDH3-209ENST00000569080 C19orf54Q5BKX5 351 aa6.12□□□□□ -1.43
CDH3-209ENST00000569080 HES5Q5TA89 166 aa6.12□□□□□ -1.43
CDH3-209ENST00000569080 UBE2UQ5VVX9 321 aa6.12□□□□□ -1.43
CDH3-209ENST00000569080 TEX38Q6PEX7 206 aa6.12□□□□□ -1.43
CDH3-209ENST00000569080 FAM131AQ6UXB0 335 aa6.12□□□□□ -1.43
CDH3-209ENST00000569080 KLHL30-AS1Q8NEE0 82 aa6.12□□□□□ -1.43
CDH3-209ENST00000569080 NPBQ8NG41 125 aa6.12□□□□□ -1.43
CDH3-209ENST00000569080 IL1F10Q8WWZ1 152 aa6.12□□□□□ -1.43
CDH3-209ENST00000569080 RAX2Q96IS3 184 aa6.12□□□□□ -1.43
CDH3-209ENST00000569080 RASL11BQ9BPW5 248 aa6.12□□□□□ -1.43
CDH3-209ENST00000569080 RIMS4Q9H426 269 aaPredicted RBP6.12□□□□□ -1.43
CDH3-209ENST00000569080 CHMP1AQ9HD42 196 aaPredicted RBP6.12□□□□□ -1.43
CDH3-209ENST00000569080 ZFP57Q9NU63 452 aa6.12□□□□□ -1.43
CDH3-209ENST00000569080 ABRACLQ9P1F3 81 aa6.12□□□□□ -1.43
CDH3-209ENST00000569080 STEAP1Q9UHE8 339 aa6.12□□□□□ -1.43
CDH3-209ENST00000569080 LRRC42Q9Y546 428 aa6.12□□□□□ -1.43
CDH3-209ENST00000569080 V9GY05 133 aa6.12□□□□□ -1.43
CDH3-209ENST00000569080 A0A0B4J203 849 aa6.11□□□□□ -1.43
CDH3-209ENST00000569080 G3V318 75 aa6.11□□□□□ -1.43
CDH3-209ENST00000569080 K7EIL1 84 aa6.11□□□□□ -1.43
CDH3-209ENST00000569080 RAB29O14966 203 aa6.11□□□□□ -1.43
CDH3-209ENST00000569080 ATP6V0E1O15342 81 aa6.11□□□□□ -1.43
CDH3-209ENST00000569080 NBR2O15453 112 aa6.11□□□□□ -1.43
CDH3-209ENST00000569080 DENRO43583 198 aaKnown RBP6.11□□□□□ -1.43
CDH3-209ENST00000569080 RRP9O43818 475 aaKnown RBP6.11□□□□□ -1.43
CDH3-209ENST00000569080 MRPS14O60783 128 aaKnown RBP6.11□□□□□ -1.43
CDH3-209ENST00000569080 DUS4LO95620 317 aaKnown RBP6.11□□□□□ -1.43
CDH3-209ENST00000569080 ELANEP08246 267 aa6.11□□□□□ -1.43
CDH3-209ENST00000569080 FCGR3AP08637 254 aa6.11□□□□□ -1.43
CDH3-209ENST00000569080 SNRPBP14678 240 aaKnown RBP6.11□□□□□ -1.43
CDH3-209ENST00000569080 GALP22466 123 aa6.11□□□□□ -1.43
CDH3-209ENST00000569080 MYCNOSP40205 109 aa6.11□□□□□ -1.43
CDH3-209ENST00000569080 CRIP2P52943 208 aaPredicted RBP6.11□□□□□ -1.43
CDH3-209ENST00000569080 KIAA0141Q14154 515 aaPredicted RBP6.11□□□□□ -1.43
CDH3-209ENST00000569080 PNLIPRP3Q17RR3 467 aa6.11□□□□□ -1.43
CDH3-209ENST00000569080 C5orf64Q2M2E5 130 aa6.11□□□□□ -1.43
CDH3-209ENST00000569080 DEFB136Q30KP8 78 aa6.11□□□□□ -1.43
CDH3-209ENST00000569080 C2orf76Q3KRA6 126 aa6.11□□□□□ -1.43
CDH3-209ENST00000569080 ZNF695Q8IW36 515 aa6.11□□□□□ -1.43
CDH3-209ENST00000569080 SPARTQ8N0X7 666 aa6.11□□□□□ -1.43
CDH3-209ENST00000569080 OR56B1Q8NGI3 324 aa6.11□□□□□ -1.43
CDH3-209ENST00000569080 OR5AN1Q8NGI8 311 aa6.11□□□□□ -1.43
CDH3-209ENST00000569080 SETD6Q8TBK2 473 aa6.11□□□□□ -1.43
CDH3-209ENST00000569080 MRAPQ8TCY5 172 aa6.11□□□□□ -1.43
CDH3-209ENST00000569080 PTX4Q96A99 478 aa6.11□□□□□ -1.43
CDH3-209ENST00000569080 C5orf30Q96GV9 206 aa6.11□□□□□ -1.43
CDH3-209ENST00000569080 ABHD14BQ96IU4 210 aa6.11□□□□□ -1.43
CDH3-209ENST00000569080 KCTD7Q96MP8 289 aa6.11□□□□□ -1.43
CDH3-209ENST00000569080 DUX3Q96PT4 197 aa6.11□□□□□ -1.43
CDH3-209ENST00000569080 CABLES2Q9BTV7 478 aa6.11□□□□□ -1.43
CDH3-209ENST00000569080 TOLLIPQ9H0E2 274 aa6.11□□□□□ -1.43
CDH3-209ENST00000569080 C11orf54Q9H0W9 315 aaPredicted RBP6.11□□□□□ -1.43
CDH3-209ENST00000569080 PIPOXQ9P0Z9 390 aa6.11□□□□□ -1.43
CDH3-209ENST00000569080 MGAT4AQ9UM21 535 aa6.11□□□□□ -1.43
CDH3-209ENST00000569080 FBXO7Q9Y3I1 522 aa6.11□□□□□ -1.43
CDH3-209ENST00000569080 OR5H14A6NHG9 310 aa6.1□□□□□ -1.43
CDH3-209ENST00000569080 NUDT19A8MXV4 375 aa6.1□□□□□ -1.43
CDH3-209ENST00000569080 SOX15O60248 233 aa6.1□□□□□ -1.43
CDH3-209ENST00000569080 IGLV1-40P01703 118 aa6.1□□□□□ -1.43
CDH3-209ENST00000569080 HIST1H1DP16402 221 aaKnown RBP6.1□□□□□ -1.43
CDH3-209ENST00000569080 RAB6AP20340 208 aa6.1□□□□□ -1.43
CDH3-209ENST00000569080 VDAC1P21796 283 aa6.1□□□□□ -1.43
CDH3-209ENST00000569080 ZBTB25P24278 435 aa6.1□□□□□ -1.43
CDH3-209ENST00000569080 HOXD3P31249 432 aaPredicted RBP6.1□□□□□ -1.43
CDH3-209ENST00000569080 FGF9P31371 208 aaPredicted RBP6.1□□□□□ -1.43
CDH3-209ENST00000569080 CDX1P47902 265 aaPredicted RBP6.1□□□□□ -1.43
CDH3-209ENST00000569080 PSMD7P51665 324 aa6.1□□□□□ -1.43
CDH3-209ENST00000569080 LINC00205P59089 165 aa6.1□□□□□ -1.43
CDH3-209ENST00000569080 SSBP2P81877 361 aaPredicted RBP6.1□□□□□ -1.43
CDH3-209ENST00000569080 CXorf66Q5JRM2 361 aaPredicted RBP6.1□□□□□ -1.43
CDH3-209ENST00000569080 ASPHD1Q5U4P2 390 aa6.1□□□□□ -1.43
CDH3-209ENST00000569080 C22orf42Q6IC83 251 aa6.1□□□□□ -1.43
CDH3-209ENST00000569080 GLDNQ6ZMI3 551 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms