RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 hCG_1809904A0A1W2PP81 198 aa8.76□□□□□ -1.01
CDH3-208ENST00000569036 A0A1W2PPE2 198 aa8.76□□□□□ -1.01
CDH3-208ENST00000569036 A0A1W2PR64 198 aa8.76□□□□□ -1.01
CDH3-208ENST00000569036 A0A1W2PRV1 198 aa8.76□□□□□ -1.01
CDH3-208ENST00000569036 A6NIN4 97 aa8.76□□□□□ -1.01
CDH3-208ENST00000569036 A6NIZ1 184 aa8.76□□□□□ -1.01
CDH3-208ENST00000569036 A8MZ25 164 aa8.76□□□□□ -1.01
CDH3-208ENST00000569036 GOSR2O14653 212 aa8.76□□□□□ -1.01
CDH3-208ENST00000569036 SNAPINO95295 136 aa8.76□□□□□ -1.01
CDH3-208ENST00000569036 APOC3P02656 99 aa8.76□□□□□ -1.01
CDH3-208ENST00000569036 LCATP04180 440 aa8.76□□□□□ -1.01
CDH3-208ENST00000569036 S100A8P05109 93 aa8.76□□□□□ -1.01
CDH3-208ENST00000569036 SPI1P17947 270 aa8.76□□□□□ -1.01
CDH3-208ENST00000569036 FSTP19883 344 aa8.76□□□□□ -1.01
CDH3-208ENST00000569036 DCTDP32321 178 aa8.76□□□□□ -1.01
CDH3-208ENST00000569036 PRSS3P35030 304 aa8.76□□□□□ -1.01
CDH3-208ENST00000569036 H2BFSP57053 126 aa8.76□□□□□ -1.01
CDH3-208ENST00000569036 RAP1BP61224 184 aa8.76□□□□□ -1.01
CDH3-208ENST00000569036 LSM6P62312 80 aaKnown RBP8.76□□□□□ -1.01
CDH3-208ENST00000569036 RAP1AP62834 184 aa8.76□□□□□ -1.01
CDH3-208ENST00000569036 EIF5AP63241 154 aaKnown RBP8.76□□□□□ -1.01
CDH3-208ENST00000569036 HIST1H3AP68431 136 aa8.76□□□□□ -1.01
CDH3-208ENST00000569036 CYCSP99999 105 aaKnown RBP8.76□□□□□ -1.01
CDH3-208ENST00000569036 FHL3Q13643 280 aa8.76□□□□□ -1.01
CDH3-208ENST00000569036 GUCA2BQ16661 112 aa8.76□□□□□ -1.01
CDH3-208ENST00000569036 RNASE12Q5GAN4 147 aaKnown RBP8.76□□□□□ -1.01
CDH3-208ENST00000569036 HES5Q5TA89 166 aa8.76□□□□□ -1.01
CDH3-208ENST00000569036 HIST2H3PS2Q5TEC6 136 aa8.76□□□□□ -1.01
CDH3-208ENST00000569036 TMEM200BQ69YZ2 307 aa8.76□□□□□ -1.01
CDH3-208ENST00000569036 AWAT2Q6E213 333 aa8.76□□□□□ -1.01
CDH3-208ENST00000569036 ELP2Q6IA86 826 aa8.76□□□□□ -1.01
CDH3-208ENST00000569036 DRAM2Q6UX65 266 aa8.76□□□□□ -1.01
CDH3-208ENST00000569036 HIST2H3AQ71DI3 136 aa8.76□□□□□ -1.01
CDH3-208ENST00000569036 SSX6Q7RTT6 188 aa8.76□□□□□ -1.01
CDH3-208ENST00000569036 NAA40Q86UY6 237 aa8.76□□□□□ -1.01
CDH3-208ENST00000569036 COMMD1Q8N668 190 aa8.76□□□□□ -1.01
CDH3-208ENST00000569036 OR13C5Q8NGS8 318 aa8.76□□□□□ -1.01
CDH3-208ENST00000569036 GPX8Q8TED1 209 aa8.76□□□□□ -1.01
CDH3-208ENST00000569036 ASB17Q8WXJ9 295 aa8.76□□□□□ -1.01
CDH3-208ENST00000569036 NARS2Q96I59 477 aaKnown RBP8.76□□□□□ -1.01
CDH3-208ENST00000569036 TCEAL7Q9BRU2 100 aa8.76□□□□□ -1.01
CDH3-208ENST00000569036 ST6GALNAC5Q9BVH7 336 aa8.76□□□□□ -1.01
CDH3-208ENST00000569036 RETNQ9HD89 108 aa8.76□□□□□ -1.01
CDH3-208ENST00000569036 KIAA1456Q9P272 454 aa8.76□□□□□ -1.01
CDH3-208ENST00000569036 KLK11Q9UBX7 282 aa8.76□□□□□ -1.01
CDH3-208ENST00000569036 MLXQ9UH92 298 aa8.76□□□□□ -1.01
CDH3-208ENST00000569036 A0A1W2PPH5 198 aa8.75□□□□□ -1.01
CDH3-208ENST00000569036 TMEM82A0PJX8 343 aa8.75□□□□□ -1.01
CDH3-208ENST00000569036 SLC17A2O00624 439 aa8.75□□□□□ -1.01
CDH3-208ENST00000569036 FGF16O43320 207 aa8.75□□□□□ -1.01
CDH3-208ENST00000569036 CD74P04233 296 aa8.75□□□□□ -1.01
CDH3-208ENST00000569036 IGHV1-8P0DP01 117 aa8.75□□□□□ -1.01
CDH3-208ENST00000569036 FOLR2P14207 255 aa8.75□□□□□ -1.01
CDH3-208ENST00000569036 HIST1H1CP16403 213 aaKnown RBP8.75□□□□□ -1.01
CDH3-208ENST00000569036 ANOS1P23352 680 aa8.75□□□□□ -1.01
CDH3-208ENST00000569036 SDHAP31040 664 aa8.75□□□□□ -1.01
CDH3-208ENST00000569036 RPL31P62899 125 aaKnown RBP8.75□□□□□ -1.01
CDH3-208ENST00000569036 ZNF92Q03936 586 aa8.75□□□□□ -1.01
CDH3-208ENST00000569036 FHL1Q13642 323 aa8.75□□□□□ -1.01
CDH3-208ENST00000569036 RAB12Q6IQ22 244 aa8.75□□□□□ -1.01
CDH3-208ENST00000569036 STEAP1BQ6NZ63 245 aa8.75□□□□□ -1.01
CDH3-208ENST00000569036 ZNF546Q86UE3 836 aa8.75□□□□□ -1.01
CDH3-208ENST00000569036 ZNF429Q86V71 674 aa8.75□□□□□ -1.01
CDH3-208ENST00000569036 OR11H6Q8NGC7 330 aa8.75□□□□□ -1.01
CDH3-208ENST00000569036 OR13D1Q8NGV5 346 aa8.75□□□□□ -1.01
CDH3-208ENST00000569036 OR8S1Q8NH09 359 aa8.75□□□□□ -1.01
CDH3-208ENST00000569036 OR2AE1Q8NHA4 323 aa8.75□□□□□ -1.01
CDH3-208ENST00000569036 ARL11Q969Q4 196 aa8.75□□□□□ -1.01
CDH3-208ENST00000569036 ST6GALNAC6Q969X2 333 aa8.75□□□□□ -1.01
CDH3-208ENST00000569036 RBM14Q96PK6 669 aaKnown RBP8.75□□□□□ -1.01
CDH3-208ENST00000569036 PRRT1Q99946 306 aa8.75□□□□□ -1.01
CDH3-208ENST00000569036 FAM110AQ9BQ89 295 aa8.75□□□□□ -1.01
CDH3-208ENST00000569036 PDCD10Q9BUL8 212 aa8.75□□□□□ -1.01
CDH3-208ENST00000569036 POLR1DQ9Y2S0 133 aa8.75□□□□□ -1.01
CDH3-208ENST00000569036 IGKV1D-17A0A075B6S4 117 aa8.74□□□□□ -1.01
CDH3-208ENST00000569036 TRAV27A0A087WT01 109 aa8.74□□□□□ -1.01
CDH3-208ENST00000569036 A0A0B4J203 849 aa8.74□□□□□ -1.01
CDH3-208ENST00000569036 TMEM218A2RU14 115 aa8.74□□□□□ -1.01
CDH3-208ENST00000569036 DISC1C4P0D8 188 aa8.74□□□□□ -1.01
CDH3-208ENST00000569036 F5H5K5 113 aa8.74□□□□□ -1.01
CDH3-208ENST00000569036 CDIPTO14735 213 aa8.74□□□□□ -1.01
CDH3-208ENST00000569036 RLN2P04090 185 aa8.74□□□□□ -1.01
CDH3-208ENST00000569036 RLN1P04808 185 aa8.74□□□□□ -1.01
CDH3-208ENST00000569036 RPLP1P05386 114 aaKnown RBP8.74□□□□□ -1.01
CDH3-208ENST00000569036 OR4E1P0C645 316 aa8.74□□□□□ -1.01
CDH3-208ENST00000569036 SMIM6P0DI80 62 aa8.74□□□□□ -1.01
CDH3-208ENST00000569036 GTF2F2P13984 249 aa8.74□□□□□ -1.01
CDH3-208ENST00000569036 RAB6AP20340 208 aa8.74□□□□□ -1.01
CDH3-208ENST00000569036 GABRA2P47869 451 aa8.74□□□□□ -1.01
CDH3-208ENST00000569036 GSK3AP49840 483 aa8.74□□□□□ -1.01
CDH3-208ENST00000569036 TAS2R31P59538 309 aa8.74□□□□□ -1.01
CDH3-208ENST00000569036 CTXN1P60606 82 aa8.74□□□□□ -1.01
CDH3-208ENST00000569036 RAB11BQ15907 218 aa8.74□□□□□ -1.01
CDH3-208ENST00000569036 C4orf46Q504U0 113 aa8.74□□□□□ -1.01
CDH3-208ENST00000569036 EIF5AL1Q6IS14 154 aaKnown RBP8.74□□□□□ -1.01
CDH3-208ENST00000569036 HAGHLQ6PII5 290 aaPredicted RBP8.74□□□□□ -1.01
CDH3-208ENST00000569036 FAM122BQ7Z309 247 aa8.74□□□□□ -1.01
CDH3-208ENST00000569036 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.74□□□□□ -1.01
CDH3-208ENST00000569036 IZUMO1Q8IYV9 350 aa8.74□□□□□ -1.01
CDH3-208ENST00000569036 Q8N1Y9 231 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms