RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 GVQW1Q8N7I0 195 aa13.77□□□□□ -0.21
COMMD4-220ENST00000567720 OR4F5Q8NH21 305 aa13.77□□□□□ -0.21
COMMD4-220ENST00000567720 CAPSLQ8WWF8 208 aa13.77□□□□□ -0.21
COMMD4-220ENST00000567720 EDARADDQ8WWZ3 215 aa13.77□□□□□ -0.21
COMMD4-220ENST00000567720 ABHD14BQ96IU4 210 aa13.77□□□□□ -0.21
COMMD4-220ENST00000567720 ZNF251Q9BRH9 671 aa13.77□□□□□ -0.21
COMMD4-220ENST00000567720 ST6GALNAC5Q9BVH7 336 aa13.77□□□□□ -0.21
COMMD4-220ENST00000567720 MRPL20Q9BYC9 149 aaKnown RBP13.77□□□□□ -0.21
COMMD4-220ENST00000567720 MIXL1Q9H2W2 232 aa13.77□□□□□ -0.21
COMMD4-220ENST00000567720 MEIS3P1A6NDR6 274 aa13.76□□□□□ -0.21
COMMD4-220ENST00000567720 ZNF736B4DX44 427 aaPredicted RBP13.76□□□□□ -0.21
COMMD4-220ENST00000567720 TSPAN9O75954 239 aa13.76□□□□□ -0.21
COMMD4-220ENST00000567720 IGKV1D-33P01593 117 aa13.76□□□□□ -0.21
COMMD4-220ENST00000567720 IGKV1-33P01594 117 aa13.76□□□□□ -0.21
COMMD4-220ENST00000567720 SOX6P35712 828 aa13.76□□□□□ -0.21
COMMD4-220ENST00000567720 LSAMPQ13449 338 aa13.76□□□□□ -0.21
COMMD4-220ENST00000567720 RPL39P5Q59GN2 51 aa13.76□□□□□ -0.21
COMMD4-220ENST00000567720 C12orf54Q6X4T0 127 aa13.76□□□□□ -0.21
COMMD4-220ENST00000567720 MOB3BQ86TA1 216 aa13.76□□□□□ -0.21
COMMD4-220ENST00000567720 OR10J5Q8NHC4 309 aa13.76□□□□□ -0.21
COMMD4-220ENST00000567720 LINC01006Q8NI28 216 aa13.76□□□□□ -0.21
COMMD4-220ENST00000567720 SNAPC3Q92966 411 aa13.76□□□□□ -0.21
COMMD4-220ENST00000567720 SLC25A33Q9BSK2 321 aa13.76□□□□□ -0.21
COMMD4-220ENST00000567720 NPFFR1Q9GZQ6 430 aa13.76□□□□□ -0.21
COMMD4-220ENST00000567720 RANBP3Q9H6Z4 567 aaPredicted RBP13.76□□□□□ -0.21
COMMD4-220ENST00000567720 ANXA10Q9UJ72 324 aa13.76□□□□□ -0.21
COMMD4-220ENST00000567720 MMP24Q9Y5R2 645 aa13.76□□□□□ -0.21
COMMD4-220ENST00000567720 OR2F2O95006 317 aa13.75□□□□□ -0.21
COMMD4-220ENST00000567720 FCER2P06734 321 aa13.75□□□□□ -0.21
COMMD4-220ENST00000567720 LPLP06858 475 aa13.75□□□□□ -0.21
COMMD4-220ENST00000567720 FAM71F2Q6NXP2 309 aa13.75□□□□□ -0.21
COMMD4-220ENST00000567720 C16orf82Q7Z2V1 217 aa13.75□□□□□ -0.21
COMMD4-220ENST00000567720 HOGA1Q86XE5 327 aa13.75□□□□□ -0.21
COMMD4-220ENST00000567720 LAX1Q8IWV1 398 aa13.75□□□□□ -0.21
COMMD4-220ENST00000567720 H1FOOQ8IZA3 346 aaPredicted RBP13.75□□□□□ -0.21
COMMD4-220ENST00000567720 BEST4Q8NFU0 473 aa13.75□□□□□ -0.21
COMMD4-220ENST00000567720 OR4C13Q8NGP0 309 aa13.75□□□□□ -0.21
COMMD4-220ENST00000567720 RBM14Q96PK6 669 aaKnown RBP13.75□□□□□ -0.21
COMMD4-220ENST00000567720 NABP2Q9BQ15 211 aa13.75□□□□□ -0.21
COMMD4-220ENST00000567720 GINS4Q9BRT9 223 aa13.75□□□□□ -0.21
COMMD4-220ENST00000567720 SLIRPQ9GZT3 109 aaKnown RBP13.75□□□□□ -0.21
COMMD4-220ENST00000567720 C16orf95Q9H693 158 aa13.75□□□□□ -0.21
COMMD4-220ENST00000567720 ZNF702PQ9H963 129 aa13.75□□□□□ -0.21
COMMD4-220ENST00000567720 PIPOXQ9P0Z9 390 aa13.75□□□□□ -0.21
COMMD4-220ENST00000567720 ANAPC10Q9UM13 185 aa13.75□□□□□ -0.21
COMMD4-220ENST00000567720 CCDC160A6NGH7 325 aa13.74□□□□□ -0.21
COMMD4-220ENST00000567720 HLA-DQB1P01920 261 aa13.74□□□□□ -0.21
COMMD4-220ENST00000567720 FAM106CPP0CH98 169 aa13.74□□□□□ -0.21
COMMD4-220ENST00000567720 TMEM11P17152 192 aa13.74□□□□□ -0.21
COMMD4-220ENST00000567720 HES1Q14469 280 aa13.74□□□□□ -0.21
COMMD4-220ENST00000567720 THNSL2Q86YJ6 484 aa13.74□□□□□ -0.21
COMMD4-220ENST00000567720 Q8N6K4 173 aa13.74□□□□□ -0.21
COMMD4-220ENST00000567720 WFDC12Q8WWY7 111 aa13.74□□□□□ -0.21
COMMD4-220ENST00000567720 C5orf30Q96GV9 206 aa13.74□□□□□ -0.21
COMMD4-220ENST00000567720 OR2D2Q9H210 308 aa13.74□□□□□ -0.21
COMMD4-220ENST00000567720 SIGLEC9Q9Y336 463 aa13.74□□□□□ -0.21
COMMD4-220ENST00000567720 CLPSL1A2RUU4 121 aa13.73□□□□□ -0.21
COMMD4-220ENST00000567720 FAM25AB3EWG3 89 aa13.73□□□□□ -0.21
COMMD4-220ENST00000567720 FAM25CB3EWG5 89 aa13.73□□□□□ -0.21
COMMD4-220ENST00000567720 FAM25GB3EWG6 89 aa13.73□□□□□ -0.21
COMMD4-220ENST00000567720 RAB29O14966 203 aa13.73□□□□□ -0.21
COMMD4-220ENST00000567720 AMY1AP04745 511 aa13.73□□□□□ -0.21
COMMD4-220ENST00000567720 AMY2AP04746 511 aa13.73□□□□□ -0.21
COMMD4-220ENST00000567720 EBI3Q14213 229 aa13.73□□□□□ -0.21
COMMD4-220ENST00000567720 CNIH2Q6PI25 160 aa13.73□□□□□ -0.21
COMMD4-220ENST00000567720 Q6ZS46 218 aa13.73□□□□□ -0.21
COMMD4-220ENST00000567720 SNX29P2Q8IUI4 249 aa13.73□□□□□ -0.21
COMMD4-220ENST00000567720 EAF1Q96JC9 268 aaPredicted RBP13.73□□□□□ -0.21
COMMD4-220ENST00000567720 BEX1Q9HBH7 125 aa13.73□□□□□ -0.21
COMMD4-220ENST00000567720 EXTL2Q9UBQ6 330 aa13.73□□□□□ -0.21
COMMD4-220ENST00000567720 RSL24D1Q9UHA3 163 aaKnown RBP13.73□□□□□ -0.21
COMMD4-220ENST00000567720 RNF150Q9ULK6 438 aa13.73□□□□□ -0.21
COMMD4-220ENST00000567720 MOB4Q9Y3A3 225 aa13.73□□□□□ -0.21
COMMD4-220ENST00000567720 CTDSP2O14595 271 aa13.72□□□□□ -0.21
COMMD4-220ENST00000567720 PROP1O75360 226 aa13.72□□□□□ -0.21
COMMD4-220ENST00000567720 OR8U9P0C7N5 309 aa13.72□□□□□ -0.21
COMMD4-220ENST00000567720 NFYAP23511 347 aaPredicted RBP13.72□□□□□ -0.21
COMMD4-220ENST00000567720 CD1BP29016 333 aa13.72□□□□□ -0.21
COMMD4-220ENST00000567720 CBX5P45973 191 aa13.72□□□□□ -0.21
COMMD4-220ENST00000567720 GPR12P47775 334 aa13.72□□□□□ -0.21
COMMD4-220ENST00000567720 PROK1P58294 105 aa13.72□□□□□ -0.21
COMMD4-220ENST00000567720 ARPC4P59998 168 aa13.72□□□□□ -0.21
COMMD4-220ENST00000567720 BLCAPP62952 87 aa13.72□□□□□ -0.21
COMMD4-220ENST00000567720 HNF4GQ14541 408 aa13.72□□□□□ -0.21
COMMD4-220ENST00000567720 TMEM95Q3KNT9 176 aa13.72□□□□□ -0.21
COMMD4-220ENST00000567720 Q8N2B8 174 aa13.72□□□□□ -0.21
COMMD4-220ENST00000567720 OR8U1Q8NH10 309 aa13.72□□□□□ -0.21
COMMD4-220ENST00000567720 AKR1E2Q96JD6 320 aa13.72□□□□□ -0.21
COMMD4-220ENST00000567720 S1PR3Q99500 378 aa13.72□□□□□ -0.21
COMMD4-220ENST00000567720 IFT46Q9NQC8 304 aa13.72□□□□□ -0.21
COMMD4-220ENST00000567720 ADAM30Q9UKF2 790 aa13.72□□□□□ -0.21
COMMD4-220ENST00000567720 MRPS7Q9Y2R9 242 aaKnown RBP13.72□□□□□ -0.21
COMMD4-220ENST00000567720 RNF114Q9Y508 228 aa13.72□□□□□ -0.21
COMMD4-220ENST00000567720 A0A1B0GUS0 222 aa13.71□□□□□ -0.21
COMMD4-220ENST00000567720 SH2D7A6NKC9 451 aaPredicted RBP13.71□□□□□ -0.21
COMMD4-220ENST00000567720 RGS5O15539 181 aa13.71□□□□□ -0.21
COMMD4-220ENST00000567720 CTXN2P0C2S0 81 aa13.71□□□□□ -0.21
COMMD4-220ENST00000567720 PRSS3P35030 304 aa13.71□□□□□ -0.21
COMMD4-220ENST00000567720 FAM131AQ6UXB0 335 aa13.71□□□□□ -0.21
COMMD4-220ENST00000567720 GLDNQ6ZMI3 551 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms