RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 OR5AN1Q8NGI8 311 aa8.82□□□□□ -1
CDH3-206ENST00000567674 OR4A4PQ8NGN8 299 aa8.82□□□□□ -1
CDH3-206ENST00000567674 CNBD2Q96M20 576 aa8.82□□□□□ -1
CDH3-206ENST00000567674 ZNF251Q9BRH9 671 aa8.82□□□□□ -1
CDH3-206ENST00000567674 CHMP1AQ9HD42 196 aaPredicted RBP8.82□□□□□ -1
CDH3-206ENST00000567674 Q9N2K0 584 aa8.82□□□□□ -1
CDH3-206ENST00000567674 KIAA1456Q9P272 454 aa8.82□□□□□ -1
CDH3-206ENST00000567674 SLC31A2O15432 143 aa8.81□□□□□ -1
CDH3-206ENST00000567674 SOCS1O15524 211 aa8.81□□□□□ -1
CDH3-206ENST00000567674 SPDEFO95238 335 aa8.81□□□□□ -1
CDH3-206ENST00000567674 ATP6V1G2O95670 118 aa8.81□□□□□ -1
CDH3-206ENST00000567674 RAB3BP20337 219 aa8.81□□□□□ -1
CDH3-206ENST00000567674 PPP1CCP36873 323 aaKnown RBP8.81□□□□□ -1
CDH3-206ENST00000567674 REG1BP48304 166 aa8.81□□□□□ -1
CDH3-206ENST00000567674 HLA-DRB3P79483 266 aa8.81□□□□□ -1
CDH3-206ENST00000567674 RUNX1Q01196 453 aa8.81□□□□□ -1
CDH3-206ENST00000567674 CFHR3Q02985 330 aa8.81□□□□□ -1
CDH3-206ENST00000567674 EGFEM1PQ0D2K5 195 aa8.81□□□□□ -1
CDH3-206ENST00000567674 OR10K2Q6IF99 312 aa8.81□□□□□ -1
CDH3-206ENST00000567674 ZNF695Q8IW36 515 aa8.81□□□□□ -1
CDH3-206ENST00000567674 LINC00482Q8N8I6 264 aa8.81□□□□□ -1
CDH3-206ENST00000567674 OR52L2PQ8NGH6 319 aa8.81□□□□□ -1
CDH3-206ENST00000567674 OR10V1Q8NGI7 309 aa8.81□□□□□ -1
CDH3-206ENST00000567674 OR8U1Q8NH10 309 aa8.81□□□□□ -1
CDH3-206ENST00000567674 SGCDQ92629 289 aa8.81□□□□□ -1
CDH3-206ENST00000567674 DPF1Q92782 380 aa8.81□□□□□ -1
CDH3-206ENST00000567674 GFI1Q99684 422 aa8.81□□□□□ -1
CDH3-206ENST00000567674 CMSS1Q9BQ75 279 aaKnown RBP8.81□□□□□ -1
CDH3-206ENST00000567674 NICN1Q9BSH3 213 aa8.81□□□□□ -1
CDH3-206ENST00000567674 IFI27L2Q9H2X8 130 aa8.81□□□□□ -1
CDH3-206ENST00000567674 AK6Q9Y3D8 172 aaKnown RBP8.81□□□□□ -1
CDH3-206ENST00000567674 DNAH3Q8TD57 4116 aa8.81□□□□□ -1
CDH3-206ENST00000567674 SAA2-SAA4A0A096LPE2 208 aa8.8□□□□□ -1
CDH3-206ENST00000567674 A0A0A6YYD4 124 aa8.8□□□□□ -1
CDH3-206ENST00000567674 TRDCB7Z8K6 153 aa8.8□□□□□ -1
CDH3-206ENST00000567674 NBR2O15453 112 aa8.8□□□□□ -1
CDH3-206ENST00000567674 SAA2P0DJI9 122 aaPredicted RBP8.8□□□□□ -1
CDH3-206ENST00000567674 PSMB8P28062 276 aa8.8□□□□□ -1
CDH3-206ENST00000567674 CEACAM6P40199 344 aa8.8□□□□□ -1
CDH3-206ENST00000567674 ACTBP60709 375 aa8.8□□□□□ -1
CDH3-206ENST00000567674 PITPNAQ00169 270 aa8.8□□□□□ -1
CDH3-206ENST00000567674 TMEM267Q0VDI3 215 aaPredicted RBP8.8□□□□□ -1
CDH3-206ENST00000567674 MMDQ15546 238 aa8.8□□□□□ -1
CDH3-206ENST00000567674 C5orf64Q2M2E5 130 aa8.8□□□□□ -1
CDH3-206ENST00000567674 PYHIN1Q6K0P9 492 aa8.8□□□□□ -1
CDH3-206ENST00000567674 LIN54Q6MZP7 749 aa8.8□□□□□ -1
CDH3-206ENST00000567674 MYOZ3Q8TDC0 251 aa8.8□□□□□ -1
CDH3-206ENST00000567674 IL1F10Q8WWZ1 152 aa8.8□□□□□ -1
CDH3-206ENST00000567674 RAB3CQ96E17 227 aa8.8□□□□□ -1
CDH3-206ENST00000567674 UBE2E2Q96LR5 201 aa8.8□□□□□ -1
CDH3-206ENST00000567674 P2RX4Q99571 388 aa8.8□□□□□ -1
CDH3-206ENST00000567674 PECRQ9BY49 303 aa8.8□□□□□ -1
CDH3-206ENST00000567674 ZNF107Q9UII5 783 aaPredicted RBP8.8□□□□□ -1
CDH3-206ENST00000567674 AK3Q9UIJ7 227 aa8.8□□□□□ -1
CDH3-206ENST00000567674 RNF150Q9ULK6 438 aa8.8□□□□□ -1
CDH3-206ENST00000567674 IGHV3-72A0A0B4J1Y9 119 aa8.79□□□□□ -1
CDH3-206ENST00000567674 NOTOA8MTQ0 251 aa8.79□□□□□ -1
CDH3-206ENST00000567674 ST8SIA5O15466 376 aa8.79□□□□□ -1
CDH3-206ENST00000567674 HSPA12AO43301 675 aa8.79□□□□□ -1
CDH3-206ENST00000567674 RAMP3O60896 148 aa8.79□□□□□ -1
CDH3-206ENST00000567674 SLC22A5O76082 557 aa8.79□□□□□ -1
CDH3-206ENST00000567674 BRI3O95415 125 aa8.79□□□□□ -1
CDH3-206ENST00000567674 CD3GP09693 182 aa8.79□□□□□ -1
CDH3-206ENST00000567674 CTXN2P0C2S0 81 aa8.79□□□□□ -1
CDH3-206ENST00000567674 DTYMKP23919 212 aa8.79□□□□□ -1
CDH3-206ENST00000567674 PPIFP30405 207 aaKnown RBP8.79□□□□□ -1
CDH3-206ENST00000567674 LGALS7P47929 136 aa8.79□□□□□ -1
CDH3-206ENST00000567674 VEGFCP49767 419 aa8.79□□□□□ -1
CDH3-206ENST00000567674 INSL3P51460 131 aa8.79□□□□□ -1
CDH3-206ENST00000567674 F2RL1P55085 397 aa8.79□□□□□ -1
CDH3-206ENST00000567674 AKIRIN2Q53H80 203 aa8.79□□□□□ -1
CDH3-206ENST00000567674 OXLD1Q5BKU9 147 aa8.79□□□□□ -1
CDH3-206ENST00000567674 ZNF562Q6V9R5 426 aa8.79□□□□□ -1
CDH3-206ENST00000567674 ZNF329Q86UD4 541 aa8.79□□□□□ -1
CDH3-206ENST00000567674 PDPNQ86YL7 162 aa8.79□□□□□ -1
CDH3-206ENST00000567674 MRPL41Q8IXM3 137 aaKnown RBP8.79□□□□□ -1
CDH3-206ENST00000567674 SPARTQ8N0X7 666 aa8.79□□□□□ -1
CDH3-206ENST00000567674 MINDY2Q8NBR6 621 aa8.79□□□□□ -1
CDH3-206ENST00000567674 OR10R2Q8NGX6 335 aa8.79□□□□□ -1
CDH3-206ENST00000567674 C4orf3Q8WVX3 66 aa8.79□□□□□ -1
CDH3-206ENST00000567674 ARHGAP5-AS1Q96IT6 56 aa8.79□□□□□ -1
CDH3-206ENST00000567674 TMEM68Q96MH6 324 aa8.79□□□□□ -1
CDH3-206ENST00000567674 TSNAXQ99598 290 aaKnown RBP8.79□□□□□ -1
CDH3-206ENST00000567674 CABLES2Q9BTV7 478 aa8.79□□□□□ -1
CDH3-206ENST00000567674 DCSTAMPQ9H295 470 aa8.79□□□□□ -1
CDH3-206ENST00000567674 OR51J1Q9H342 316 aa8.79□□□□□ -1
CDH3-206ENST00000567674 ZNF221Q9UK13 617 aa8.79□□□□□ -1
CDH3-206ENST00000567674 WASHC3Q9Y3C0 194 aa8.79□□□□□ -1
CDH3-206ENST00000567674 A0A0A6YYH2 397 aa8.78□□□□□ -1
CDH3-206ENST00000567674 TMEM272A0A1B0GTI8 110 aa8.78□□□□□ -1
CDH3-206ENST00000567674 A6NJ64 397 aa8.78□□□□□ -1
CDH3-206ENST00000567674 RAB27BO00194 218 aa8.78□□□□□ -1
CDH3-206ENST00000567674 IGLV1-40P01703 118 aa8.78□□□□□ -1
CDH3-206ENST00000567674 CT45A6P0DMU7 189 aa8.78□□□□□ -1
CDH3-206ENST00000567674 CT45A5P0DMU8 189 aa8.78□□□□□ -1
CDH3-206ENST00000567674 CT45A7P0DMV0 189 aa8.78□□□□□ -1
CDH3-206ENST00000567674 RRASP10301 218 aa8.78□□□□□ -1
CDH3-206ENST00000567674 HIST1H1DP16402 221 aaKnown RBP8.78□□□□□ -1
CDH3-206ENST00000567674 CD40LGP29965 261 aa8.78□□□□□ -1
CDH3-206ENST00000567674 MAP2K4P45985 399 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms