RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 RCVRNP35243 200 aa9.81□□□□□ -0.84
SF3B3-208ENST00000567250 ZNF134P52741 427 aa9.81□□□□□ -0.84
SF3B3-208ENST00000567250 IL18Q14116 193 aa9.81□□□□□ -0.84
SF3B3-208ENST00000567250 IGSF11Q5DX21 431 aa9.81□□□□□ -0.84
SF3B3-208ENST00000567250 DHRS7BQ6IAN0 325 aaPredicted RBP9.81□□□□□ -0.84
SF3B3-208ENST00000567250 PYHIN1Q6K0P9 492 aa9.81□□□□□ -0.84
SF3B3-208ENST00000567250 FAM53AQ6NSI3 398 aaPredicted RBP9.81□□□□□ -0.84
SF3B3-208ENST00000567250 C16orf82Q7Z2V1 217 aa9.81□□□□□ -0.84
SF3B3-208ENST00000567250 C5orf24Q7Z6I8 188 aa9.81□□□□□ -0.84
SF3B3-208ENST00000567250 GVQW1Q8N7I0 195 aa9.81□□□□□ -0.84
SF3B3-208ENST00000567250 OR5AP2Q8NGF4 316 aa9.81□□□□□ -0.84
SF3B3-208ENST00000567250 CAPSLQ8WWF8 208 aa9.81□□□□□ -0.84
SF3B3-208ENST00000567250 RTN4IP1Q8WWV3 396 aaPredicted RBP9.81□□□□□ -0.84
SF3B3-208ENST00000567250 GCDHQ92947 438 aaPredicted RBP9.81□□□□□ -0.84
SF3B3-208ENST00000567250 MIXL1Q9H2W2 232 aa9.81□□□□□ -0.84
SF3B3-208ENST00000567250 ZNF221Q9UK13 617 aa9.81□□□□□ -0.84
SF3B3-208ENST00000567250 IGKV1D-8A0A087WSZ0 117 aa9.8□□□□□ -0.84
SF3B3-208ENST00000567250 SAA2-SAA4A0A096LPE2 208 aa9.8□□□□□ -0.84
SF3B3-208ENST00000567250 MEIS3P1A6NDR6 274 aa9.8□□□□□ -0.84
SF3B3-208ENST00000567250 RNF212BA8MTL3 300 aa9.8□□□□□ -0.84
SF3B3-208ENST00000567250 GPR137BO60478 399 aa9.8□□□□□ -0.84
SF3B3-208ENST00000567250 FAM106CPP0CH98 169 aa9.8□□□□□ -0.84
SF3B3-208ENST00000567250 SAA2P0DJI9 122 aaPredicted RBP9.8□□□□□ -0.84
SF3B3-208ENST00000567250 PAX6P26367 422 aa9.8□□□□□ -0.84
SF3B3-208ENST00000567250 GPR12P47775 334 aa9.8□□□□□ -0.84
SF3B3-208ENST00000567250 LY6EQ16553 131 aa9.8□□□□□ -0.84
SF3B3-208ENST00000567250 KRTAP24-1Q3LI83 254 aa9.8□□□□□ -0.84
SF3B3-208ENST00000567250 ZNF833PQ6ZTB9 187 aa9.8□□□□□ -0.84
SF3B3-208ENST00000567250 MOB3BQ86TA1 216 aa9.8□□□□□ -0.84
SF3B3-208ENST00000567250 H1FOOQ8IZA3 346 aaPredicted RBP9.8□□□□□ -0.84
SF3B3-208ENST00000567250 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.8□□□□□ -0.84
SF3B3-208ENST00000567250 OR56B4Q8NH76 319 aa9.8□□□□□ -0.84
SF3B3-208ENST00000567250 GPX8Q8TED1 209 aa9.8□□□□□ -0.84
SF3B3-208ENST00000567250 ST6GALNAC6Q969X2 333 aa9.8□□□□□ -0.84
SF3B3-208ENST00000567250 C11orf54Q9H0W9 315 aaPredicted RBP9.8□□□□□ -0.84
SF3B3-208ENST00000567250 OR2D2Q9H210 308 aa9.8□□□□□ -0.84
SF3B3-208ENST00000567250 ANAPC10Q9UM13 185 aa9.8□□□□□ -0.84
SF3B3-208ENST00000567250 FAM181BA6NEQ2 426 aa9.79□□□□□ -0.84
SF3B3-208ENST00000567250 TIMM23O14925 209 aa9.79□□□□□ -0.84
SF3B3-208ENST00000567250 SLC22A5O76082 557 aa9.79□□□□□ -0.84
SF3B3-208ENST00000567250 OR3A3P47888 321 aa9.79□□□□□ -0.84
SF3B3-208ENST00000567250 REG1BP48304 166 aa9.79□□□□□ -0.84
SF3B3-208ENST00000567250 SRSF2Q01130 221 aaKnown RBP9.79□□□□□ -0.84
SF3B3-208ENST00000567250 SSBP1Q04837 148 aaKnown RBP9.79□□□□□ -0.84
SF3B3-208ENST00000567250 HABP2Q14520 560 aaPredicted RBP9.79□□□□□ -0.84
SF3B3-208ENST00000567250 CDK10Q15131 360 aa9.79□□□□□ -0.84
SF3B3-208ENST00000567250 ACTBL2Q562R1 376 aa9.79□□□□□ -0.84
SF3B3-208ENST00000567250 THNSL2Q86YJ6 484 aa9.79□□□□□ -0.84
SF3B3-208ENST00000567250 DRAM1Q8N682 238 aa9.79□□□□□ -0.84
SF3B3-208ENST00000567250 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.79□□□□□ -0.84
SF3B3-208ENST00000567250 OR5H2Q8NGV7 314 aa9.79□□□□□ -0.84
SF3B3-208ENST00000567250 FCAMRQ8WWV6 532 aa9.79□□□□□ -0.84
SF3B3-208ENST00000567250 CFHR4Q92496 578 aa9.79□□□□□ -0.84
SF3B3-208ENST00000567250 SNAPC3Q92966 411 aa9.79□□□□□ -0.84
SF3B3-208ENST00000567250 NPFFR1Q9GZQ6 430 aa9.79□□□□□ -0.84
SF3B3-208ENST00000567250 RANBP3Q9H6Z4 567 aaPredicted RBP9.79□□□□□ -0.84
SF3B3-208ENST00000567250 BATF3Q9NR55 127 aa9.79□□□□□ -0.84
SF3B3-208ENST00000567250 OR2W1Q9Y3N9 320 aa9.79□□□□□ -0.84
SF3B3-208ENST00000567250 A6NDX4 124 aa9.78□□□□□ -0.84
SF3B3-208ENST00000567250 GABARAPH6UMI1 98 aa9.78□□□□□ -0.84
SF3B3-208ENST00000567250 M0QZK8 103 aa9.78□□□□□ -0.84
SF3B3-208ENST00000567250 IGKV1D-33P01593 117 aa9.78□□□□□ -0.84
SF3B3-208ENST00000567250 IGKV1-33P01594 117 aa9.78□□□□□ -0.84
SF3B3-208ENST00000567250 OR5H8P0DN80 308 aa9.78□□□□□ -0.84
SF3B3-208ENST00000567250 HKR1P10072 659 aa9.78□□□□□ -0.84
SF3B3-208ENST00000567250 NAT1P18440 290 aa9.78□□□□□ -0.84
SF3B3-208ENST00000567250 CD1BP29016 333 aa9.78□□□□□ -0.84
SF3B3-208ENST00000567250 RAB13P51153 203 aa9.78□□□□□ -0.84
SF3B3-208ENST00000567250 LUMP51884 338 aaPredicted RBP9.78□□□□□ -0.84
SF3B3-208ENST00000567250 LSAMPQ13449 338 aa9.78□□□□□ -0.84
SF3B3-208ENST00000567250 DIAPH2-AS1Q14236 149 aa9.78□□□□□ -0.84
SF3B3-208ENST00000567250 HES1Q14469 280 aa9.78□□□□□ -0.84
SF3B3-208ENST00000567250 ODF3L1Q8IXM7 274 aa9.78□□□□□ -0.84
SF3B3-208ENST00000567250 PIFOQ8TCI5 191 aa9.78□□□□□ -0.84
SF3B3-208ENST00000567250 ABHD14BQ96IU4 210 aa9.78□□□□□ -0.84
SF3B3-208ENST00000567250 AGMATQ9BSE5 352 aa9.78□□□□□ -0.84
SF3B3-208ENST00000567250 C19orf24Q9BVV8 132 aa9.78□□□□□ -0.84
SF3B3-208ENST00000567250 PARP12Q9H0J9 701 aaKnown RBP9.78□□□□□ -0.84
SF3B3-208ENST00000567250 EHFQ9NZC4 300 aa9.78□□□□□ -0.84
SF3B3-208ENST00000567250 FABP12A6NFH5 140 aa9.77□□□□□ -0.85
SF3B3-208ENST00000567250 OR5H14A6NHG9 310 aa9.77□□□□□ -0.85
SF3B3-208ENST00000567250 FAM90A9PA6NNJ1 464 aa9.77□□□□□ -0.85
SF3B3-208ENST00000567250 CTDSPLO15194 276 aa9.77□□□□□ -0.85
SF3B3-208ENST00000567250 RBBP9O75884 186 aa9.77□□□□□ -0.85
SF3B3-208ENST00000567250 OR2F2O95006 317 aa9.77□□□□□ -0.85
SF3B3-208ENST00000567250 SNRNP70P08621 437 aaKnown RBP9.77□□□□□ -0.85
SF3B3-208ENST00000567250 OR8U9P0C7N5 309 aa9.77□□□□□ -0.85
SF3B3-208ENST00000567250 TMEM11P17152 192 aa9.77□□□□□ -0.85
SF3B3-208ENST00000567250 TBPP20226 339 aa9.77□□□□□ -0.85
SF3B3-208ENST00000567250 NFYAP23511 347 aaPredicted RBP9.77□□□□□ -0.85
SF3B3-208ENST00000567250 TNFSF8P32971 234 aa9.77□□□□□ -0.85
SF3B3-208ENST00000567250 FOXL1Q12952 345 aa9.77□□□□□ -0.85
SF3B3-208ENST00000567250 RNASE12Q5GAN4 147 aaKnown RBP9.77□□□□□ -0.85
SF3B3-208ENST00000567250 SPANXN2Q5MJ10 180 aa9.77□□□□□ -0.85
SF3B3-208ENST00000567250 FOXB2Q5VYV0 432 aa9.77□□□□□ -0.85
SF3B3-208ENST00000567250 FAM131AQ6UXB0 335 aa9.77□□□□□ -0.85
SF3B3-208ENST00000567250 ZNF645Q8N7E2 425 aa9.77□□□□□ -0.85
SF3B3-208ENST00000567250 OR4C13Q8NGP0 309 aa9.77□□□□□ -0.85
SF3B3-208ENST00000567250 OR2T10Q8NGZ9 312 aa9.77□□□□□ -0.85
SF3B3-208ENST00000567250 OR8U1Q8NH10 309 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms