RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 SAA2-SAA4A0A096LPE2 208 aa11.13□□□□□ -0.63
COMMD4-216ENST00000567023 ITGB1BP1O14713 200 aa11.13□□□□□ -0.63
COMMD4-216ENST00000567023 RAB29O14966 203 aa11.13□□□□□ -0.63
COMMD4-216ENST00000567023 HLA-DRB1P01911 266 aa11.13□□□□□ -0.63
COMMD4-216ENST00000567023 SAA2P0DJI9 122 aaPredicted RBP11.13□□□□□ -0.63
COMMD4-216ENST00000567023 SLC2A2P11168 524 aaPredicted RBP11.13□□□□□ -0.63
COMMD4-216ENST00000567023 BLVRBP30043 206 aaPredicted RBP11.13□□□□□ -0.63
COMMD4-216ENST00000567023 LCNL1Q6ZST4 164 aa11.13□□□□□ -0.63
COMMD4-216ENST00000567023 C4orf3Q8WVX3 66 aa11.13□□□□□ -0.63
COMMD4-216ENST00000567023 FCGR1BQ92637 280 aa11.13□□□□□ -0.63
COMMD4-216ENST00000567023 GFI1Q99684 422 aa11.13□□□□□ -0.63
COMMD4-216ENST00000567023 ZNF251Q9BRH9 671 aa11.13□□□□□ -0.63
COMMD4-216ENST00000567023 NICN1Q9BSH3 213 aa11.13□□□□□ -0.63
COMMD4-216ENST00000567023 MRPL20Q9BYC9 149 aaKnown RBP11.13□□□□□ -0.63
COMMD4-216ENST00000567023 LPAR5Q9H1C0 372 aa11.13□□□□□ -0.63
COMMD4-216ENST00000567023 IFI27L2Q9H2X8 130 aa11.13□□□□□ -0.63
COMMD4-216ENST00000567023 PLEKHJ1Q9NW61 149 aa11.13□□□□□ -0.63
COMMD4-216ENST00000567023 PIPOXQ9P0Z9 390 aa11.13□□□□□ -0.63
COMMD4-216ENST00000567023 STEAP1Q9UHE8 339 aa11.13□□□□□ -0.63
COMMD4-216ENST00000567023 HSF4Q9ULV5 492 aa11.13□□□□□ -0.63
COMMD4-216ENST00000567023 A0A0A6YYD4 124 aa11.12□□□□□ -0.63
COMMD4-216ENST00000567023 IGHV7-81A0A0B4J1V7 117 aa11.12□□□□□ -0.63
COMMD4-216ENST00000567023 SLC17A2O00624 439 aa11.12□□□□□ -0.63
COMMD4-216ENST00000567023 NBR2O15453 112 aa11.12□□□□□ -0.63
COMMD4-216ENST00000567023 RAMP3O60896 148 aa11.12□□□□□ -0.63
COMMD4-216ENST00000567023 NDUFA3O95167 84 aa11.12□□□□□ -0.63
COMMD4-216ENST00000567023 IGLV1-40P01703 118 aa11.12□□□□□ -0.63
COMMD4-216ENST00000567023 GALP22466 123 aa11.12□□□□□ -0.63
COMMD4-216ENST00000567023 OR3A3P47888 321 aa11.12□□□□□ -0.63
COMMD4-216ENST00000567023 DCTN2Q13561 401 aaKnown RBP11.12□□□□□ -0.63
COMMD4-216ENST00000567023 FHL3Q13643 280 aa11.12□□□□□ -0.63
COMMD4-216ENST00000567023 KIAA0141Q14154 515 aaPredicted RBP11.12□□□□□ -0.63
COMMD4-216ENST00000567023 C5orf64Q2M2E5 130 aa11.12□□□□□ -0.63
COMMD4-216ENST00000567023 DEFB136Q30KP8 78 aa11.12□□□□□ -0.63
COMMD4-216ENST00000567023 VAX1Q5SQQ9 334 aa11.12□□□□□ -0.63
COMMD4-216ENST00000567023 LIN54Q6MZP7 749 aa11.12□□□□□ -0.63
COMMD4-216ENST00000567023 MOB1BQ7L9L4 216 aa11.12□□□□□ -0.63
COMMD4-216ENST00000567023 OR5M8Q8NGP6 311 aa11.12□□□□□ -0.63
COMMD4-216ENST00000567023 UBE2E2Q96LR5 201 aa11.12□□□□□ -0.63
COMMD4-216ENST00000567023 AGMATQ9BSE5 352 aa11.12□□□□□ -0.63
COMMD4-216ENST00000567023 OR51J1Q9H342 316 aa11.12□□□□□ -0.63
COMMD4-216ENST00000567023 SLC23A1Q9UHI7 598 aa11.12□□□□□ -0.63
COMMD4-216ENST00000567023 KMT2CQ8NEZ4 4911 aaKnown RBP11.11□□□□□ -0.63
COMMD4-216ENST00000567023 TRDV1A0A1B0GX56 115 aa11.11□□□□□ -0.63
COMMD4-216ENST00000567023 FOXI3A8MTJ6 420 aaPredicted RBP11.11□□□□□ -0.63
COMMD4-216ENST00000567023 SOCS1O15524 211 aa11.11□□□□□ -0.63
COMMD4-216ENST00000567023 ARSBP15848 533 aa11.11□□□□□ -0.63
COMMD4-216ENST00000567023 CNTFRP26992 372 aa11.11□□□□□ -0.63
COMMD4-216ENST00000567023 CALRP27797 417 aaKnown RBP11.11□□□□□ -0.63
COMMD4-216ENST00000567023 DGCR2P98153 550 aa11.11□□□□□ -0.63
COMMD4-216ENST00000567023 IL1F10Q8WWZ1 152 aa11.11□□□□□ -0.63
COMMD4-216ENST00000567023 B9D2Q9BPU9 175 aa11.11□□□□□ -0.63
COMMD4-216ENST00000567023 URM1Q9BTM9 101 aaKnown RBP11.11□□□□□ -0.63
COMMD4-216ENST00000567023 KCNK15Q9H427 330 aa11.11□□□□□ -0.63
COMMD4-216ENST00000567023 MGAT4AQ9UM21 535 aa11.11□□□□□ -0.63
COMMD4-216ENST00000567023 TRAV1-2A0A0B4J238 106 aa11.1□□□□□ -0.63
COMMD4-216ENST00000567023 OR5H14A6NHG9 310 aa11.1□□□□□ -0.63
COMMD4-216ENST00000567023 G3V318 75 aa11.1□□□□□ -0.63
COMMD4-216ENST00000567023 ATP6V0E1O15342 81 aa11.1□□□□□ -0.63
COMMD4-216ENST00000567023 ST8SIA5O15466 376 aa11.1□□□□□ -0.63
COMMD4-216ENST00000567023 CT45A6P0DMU7 189 aa11.1□□□□□ -0.63
COMMD4-216ENST00000567023 CT45A5P0DMU8 189 aa11.1□□□□□ -0.63
COMMD4-216ENST00000567023 CT45A7P0DMV0 189 aa11.1□□□□□ -0.63
COMMD4-216ENST00000567023 PSMB9P28065 219 aa11.1□□□□□ -0.63
COMMD4-216ENST00000567023 MC5RP33032 325 aa11.1□□□□□ -0.63
COMMD4-216ENST00000567023 RANBP1P43487 201 aa11.1□□□□□ -0.63
COMMD4-216ENST00000567023 CRIP2P52943 208 aaPredicted RBP11.1□□□□□ -0.63
COMMD4-216ENST00000567023 TMEM50BP56557 158 aa11.1□□□□□ -0.63
COMMD4-216ENST00000567023 RAB25P57735 213 aa11.1□□□□□ -0.63
COMMD4-216ENST00000567023 RUNX1Q01196 453 aa11.1□□□□□ -0.63
COMMD4-216ENST00000567023 C9orf66Q5T8R8 295 aa11.1□□□□□ -0.63
COMMD4-216ENST00000567023 ZNF491Q8N8L2 437 aa11.1□□□□□ -0.63
COMMD4-216ENST00000567023 MINDY2Q8NBR6 621 aa11.1□□□□□ -0.63
COMMD4-216ENST00000567023 KLK15Q9H2R5 256 aa11.1□□□□□ -0.63
COMMD4-216ENST00000567023 PLGRKTQ9HBL7 147 aa11.1□□□□□ -0.63
COMMD4-216ENST00000567023 CHMP1AQ9HD42 196 aaPredicted RBP11.1□□□□□ -0.63
COMMD4-216ENST00000567023 AK3Q9UIJ7 227 aa11.1□□□□□ -0.63
COMMD4-216ENST00000567023 AK6Q9Y3D8 172 aaKnown RBP11.1□□□□□ -0.63
COMMD4-216ENST00000567023 TRAV41A0A0B4J266 112 aa11.09□□□□□ -0.63
COMMD4-216ENST00000567023 SHISA3A0PJX4 238 aa11.09□□□□□ -0.63
COMMD4-216ENST00000567023 I3L521 148 aa11.09□□□□□ -0.63
COMMD4-216ENST00000567023 ZBTB25P24278 435 aa11.09□□□□□ -0.63
COMMD4-216ENST00000567023 FGF9P31371 208 aaPredicted RBP11.09□□□□□ -0.63
COMMD4-216ENST00000567023 RAB9AP51151 201 aa11.09□□□□□ -0.63
COMMD4-216ENST00000567023 PSMD7P51665 324 aa11.09□□□□□ -0.63
COMMD4-216ENST00000567023 C19orf54Q5BKX5 351 aa11.09□□□□□ -0.63
COMMD4-216ENST00000567023 ZNF660Q6AZW8 331 aaPredicted RBP11.09□□□□□ -0.63
COMMD4-216ENST00000567023 TMEM65Q6PI78 240 aa11.09□□□□□ -0.63
COMMD4-216ENST00000567023 OR11H1Q8NG94 326 aa11.09□□□□□ -0.63
COMMD4-216ENST00000567023 OR5AN1Q8NGI8 311 aa11.09□□□□□ -0.63
COMMD4-216ENST00000567023 EDARADDQ8WWZ3 215 aa11.09□□□□□ -0.63
COMMD4-216ENST00000567023 PTX4Q96A99 478 aa11.09□□□□□ -0.63
COMMD4-216ENST00000567023 RNF5Q99942 180 aa11.09□□□□□ -0.63
COMMD4-216ENST00000567023 Q9N2K0 584 aa11.09□□□□□ -0.63
COMMD4-216ENST00000567023 KIAA1456Q9P272 454 aa11.09□□□□□ -0.63
COMMD4-216ENST00000567023 SCOCQ9UIL1 159 aa11.09□□□□□ -0.63
COMMD4-216ENST00000567023 VSIG4Q9Y279 399 aa11.09□□□□□ -0.63
COMMD4-216ENST00000567023 WSB1Q9Y6I7 421 aa11.09□□□□□ -0.63
COMMD4-216ENST00000567023 H0YJW9 148 aa11.08□□□□□ -0.64
COMMD4-216ENST00000567023 LDLRAD4O15165 306 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms