RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 ARPC1BO15143 372 aaKnown RBP11.62□□□□□ -0.55
RNF40-209ENST00000566703 RBBP9O75884 186 aa11.62□□□□□ -0.55
RNF40-209ENST00000566703 BPNT1O95861 308 aa11.62□□□□□ -0.55
RNF40-209ENST00000566703 CT45A6P0DMU7 189 aa11.62□□□□□ -0.55
RNF40-209ENST00000566703 CT45A5P0DMU8 189 aa11.62□□□□□ -0.55
RNF40-209ENST00000566703 CT45A7P0DMV0 189 aa11.62□□□□□ -0.55
RNF40-209ENST00000566703 HTR2CP28335 458 aa11.62□□□□□ -0.55
RNF40-209ENST00000566703 GNB1P62873 340 aa11.62□□□□□ -0.55
RNF40-209ENST00000566703 CX3CL1P78423 397 aa11.62□□□□□ -0.55
RNF40-209ENST00000566703 PYHIN1Q6K0P9 492 aa11.62□□□□□ -0.55
RNF40-209ENST00000566703 CD200R1LQ6Q8B3 271 aa11.62□□□□□ -0.55
RNF40-209ENST00000566703 MOB1BQ7L9L4 216 aa11.62□□□□□ -0.55
RNF40-209ENST00000566703 C6orf201Q7Z4U5 140 aa11.62□□□□□ -0.55
RNF40-209ENST00000566703 LRRTM1Q86UE6 522 aa11.62□□□□□ -0.55
RNF40-209ENST00000566703 SVOPQ8N4V2 548 aa11.62□□□□□ -0.55
RNF40-209ENST00000566703 BPIFB6Q8NFQ5 453 aa11.62□□□□□ -0.55
RNF40-209ENST00000566703 CYYR1Q96J86 154 aa11.62□□□□□ -0.55
RNF40-209ENST00000566703 TPSG1Q9NRR2 321 aa11.62□□□□□ -0.55
RNF40-209ENST00000566703 MGAT4AQ9UM21 535 aa11.62□□□□□ -0.55
RNF40-209ENST00000566703 FOXA2Q9Y261 457 aaPredicted RBP11.62□□□□□ -0.55
RNF40-209ENST00000566703 A0A1W2PN81 502 aa11.61□□□□□ -0.55
RNF40-209ENST00000566703 TMEM14DPA8MWL7 114 aa11.61□□□□□ -0.55
RNF40-209ENST00000566703 LY86O95711 162 aa11.61□□□□□ -0.55
RNF40-209ENST00000566703 GSTP1P09211 210 aaKnown RBP11.61□□□□□ -0.55
RNF40-209ENST00000566703 GNAO1P09471 354 aa11.61□□□□□ -0.55
RNF40-209ENST00000566703 SRMP19623 302 aa11.61□□□□□ -0.55
RNF40-209ENST00000566703 CHRNA7P36544 502 aa11.61□□□□□ -0.55
RNF40-209ENST00000566703 QRFPP83859 136 aa11.61□□□□□ -0.55
RNF40-209ENST00000566703 OR10K2Q6IF99 312 aa11.61□□□□□ -0.55
RNF40-209ENST00000566703 OR5AN1Q8NGI8 311 aa11.61□□□□□ -0.55
RNF40-209ENST00000566703 IL1F10Q8WWZ1 152 aa11.61□□□□□ -0.55
RNF40-209ENST00000566703 OR5B12Q96R08 314 aa11.61□□□□□ -0.55
RNF40-209ENST00000566703 ASCL2Q99929 193 aa11.61□□□□□ -0.55
RNF40-209ENST00000566703 AGMATQ9BSE5 352 aa11.61□□□□□ -0.55
RNF40-209ENST00000566703 MND1Q9BWT6 205 aa11.61□□□□□ -0.55
RNF40-209ENST00000566703 TOLLIPQ9H0E2 274 aa11.61□□□□□ -0.55
RNF40-209ENST00000566703 PLEKHJ1Q9NW61 149 aa11.61□□□□□ -0.55
RNF40-209ENST00000566703 DNAH9Q9NYC9 4486 aa11.6□□□□□ -0.55
RNF40-209ENST00000566703 LINC01619G3V211 115 aa11.6□□□□□ -0.55
RNF40-209ENST00000566703 H0YJW9 148 aa11.6□□□□□ -0.55
RNF40-209ENST00000566703 SLC22A1O15245 554 aa11.6□□□□□ -0.55
RNF40-209ENST00000566703 ST8SIA5O15466 376 aa11.6□□□□□ -0.55
RNF40-209ENST00000566703 SOX15O60248 233 aa11.6□□□□□ -0.55
RNF40-209ENST00000566703 CDK1P06493 297 aa11.6□□□□□ -0.55
RNF40-209ENST00000566703 LGALS1P09382 135 aaKnown RBP11.6□□□□□ -0.55
RNF40-209ENST00000566703 EGR2P11161 476 aaPredicted RBP11.6□□□□□ -0.55
RNF40-209ENST00000566703 GABPB1Q06547 395 aaPredicted RBP11.6□□□□□ -0.55
RNF40-209ENST00000566703 SPHARQ15513 63 aa11.6□□□□□ -0.55
RNF40-209ENST00000566703 AKIRIN2Q53H80 203 aa11.6□□□□□ -0.55
RNF40-209ENST00000566703 FAM131AQ6UXB0 335 aa11.6□□□□□ -0.55
RNF40-209ENST00000566703 ZNF562Q6V9R5 426 aa11.6□□□□□ -0.55
RNF40-209ENST00000566703 EDARADDQ8WWZ3 215 aa11.6□□□□□ -0.55
RNF40-209ENST00000566703 DLX4Q92988 240 aaPredicted RBP11.6□□□□□ -0.55
RNF40-209ENST00000566703 FLYWCH2Q96CP2 140 aaKnown RBP11.6□□□□□ -0.55
RNF40-209ENST00000566703 URM1Q9BTM9 101 aaKnown RBP11.6□□□□□ -0.55
RNF40-209ENST00000566703 FBXL15Q9H469 300 aa11.6□□□□□ -0.55
RNF40-209ENST00000566703 CHMP1AQ9HD42 196 aaPredicted RBP11.6□□□□□ -0.55
RNF40-209ENST00000566703 WASHC3Q9Y3C0 194 aa11.6□□□□□ -0.55
RNF40-209ENST00000566703 CASQ2O14958 399 aaPredicted RBP11.59□□□□□ -0.55
RNF40-209ENST00000566703 UCHL1P09936 223 aa11.59□□□□□ -0.55
RNF40-209ENST00000566703 ZBTB25P24278 435 aa11.59□□□□□ -0.55
RNF40-209ENST00000566703 CD40LGP29965 261 aa11.59□□□□□ -0.55
RNF40-209ENST00000566703 RANBP1P43487 201 aa11.59□□□□□ -0.55
RNF40-209ENST00000566703 NDPQ00604 133 aa11.59□□□□□ -0.55
RNF40-209ENST00000566703 UNC119Q13432 240 aa11.59□□□□□ -0.55
RNF40-209ENST00000566703 INSL4Q14641 139 aa11.59□□□□□ -0.55
RNF40-209ENST00000566703 PLGLAQ15195 96 aa11.59□□□□□ -0.55
RNF40-209ENST00000566703 ECSCRQ19T08 205 aa11.59□□□□□ -0.55
RNF40-209ENST00000566703 HSD17B12Q53GQ0 312 aa11.59□□□□□ -0.55
RNF40-209ENST00000566703 RPL39P5Q59GN2 51 aa11.59□□□□□ -0.55
RNF40-209ENST00000566703 RBM48Q5RL73 367 aaKnown RBP11.59□□□□□ -0.55
RNF40-209ENST00000566703 OGFRL1Q5TC84 451 aaPredicted RBP11.59□□□□□ -0.55
RNF40-209ENST00000566703 ACSM6Q6P461 480 aa11.59□□□□□ -0.55
RNF40-209ENST00000566703 CEACAM19Q7Z692 300 aa11.59□□□□□ -0.55
RNF40-209ENST00000566703 FAM89BQ8N5H3 189 aa11.59□□□□□ -0.55
RNF40-209ENST00000566703 OR6M1Q8NGM8 313 aa11.59□□□□□ -0.55
RNF40-209ENST00000566703 OR6Q1Q8NGQ2 317 aa11.59□□□□□ -0.55
RNF40-209ENST00000566703 PTX4Q96A99 478 aa11.59□□□□□ -0.55
RNF40-209ENST00000566703 TMED9Q9BVK6 235 aa11.59□□□□□ -0.55
RNF40-209ENST00000566703 ISYNA1Q9NPH2 558 aa11.59□□□□□ -0.55
RNF40-209ENST00000566703 HSF4Q9ULV5 492 aa11.59□□□□□ -0.55
RNF40-209ENST00000566703 FBXO7Q9Y3I1 522 aa11.59□□□□□ -0.55
RNF40-209ENST00000566703 H7C2Y5 167 aa11.58□□□□□ -0.56
RNF40-209ENST00000566703 FCN1O00602 326 aa11.58□□□□□ -0.56
RNF40-209ENST00000566703 SAP30O75446 220 aa11.58□□□□□ -0.56
RNF40-209ENST00000566703 HSPB1P04792 205 aaKnown RBP11.58□□□□□ -0.56
RNF40-209ENST00000566703 CEACAM6P40199 344 aa11.58□□□□□ -0.56
RNF40-209ENST00000566703 RCN1Q15293 331 aa11.58□□□□□ -0.56
RNF40-209ENST00000566703 PPP1R27Q86WC6 154 aa11.58□□□□□ -0.56
RNF40-209ENST00000566703 SETD6Q8TBK2 473 aa11.58□□□□□ -0.56
RNF40-209ENST00000566703 ABHD14BQ96IU4 210 aa11.58□□□□□ -0.56
RNF40-209ENST00000566703 RHOVQ96L33 236 aa11.58□□□□□ -0.56
RNF40-209ENST00000566703 TSNAXQ99598 290 aaKnown RBP11.58□□□□□ -0.56
RNF40-209ENST00000566703 NICN1Q9BSH3 213 aa11.58□□□□□ -0.56
RNF40-209ENST00000566703 C11orf54Q9H0W9 315 aaPredicted RBP11.58□□□□□ -0.56
RNF40-209ENST00000566703 LPAR5Q9H1C0 372 aa11.58□□□□□ -0.56
RNF40-209ENST00000566703 SLA2Q9H6Q3 261 aa11.58□□□□□ -0.56
RNF40-209ENST00000566703 COL7A1Q02388 2944 aa11.58□□□□□ -0.56
RNF40-209ENST00000566703 SPDEFO95238 335 aa11.57□□□□□ -0.56
RNF40-209ENST00000566703 OR8U9P0C7N5 309 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms