RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 IGKV1-6A0A0C4DH72 117 aa10.11□□□□□ -0.79
SHCBP1-204ENST00000565887 A0A1W2PPI3 338 aa10.11□□□□□ -0.79
SHCBP1-204ENST00000565887 BET1O15155 118 aa10.11□□□□□ -0.79
SHCBP1-204ENST00000565887 HPGDSO60760 199 aa10.11□□□□□ -0.79
SHCBP1-204ENST00000565887 OR2F2O95006 317 aa10.11□□□□□ -0.79
SHCBP1-204ENST00000565887 ELK1P19419 428 aa10.11□□□□□ -0.79
SHCBP1-204ENST00000565887 MC5RP33032 325 aa10.11□□□□□ -0.79
SHCBP1-204ENST00000565887 RAG2P55895 527 aa10.11□□□□□ -0.79
SHCBP1-204ENST00000565887 EBI3Q14213 229 aa10.11□□□□□ -0.79
SHCBP1-204ENST00000565887 IGSF11Q5DX21 431 aa10.11□□□□□ -0.79
SHCBP1-204ENST00000565887 DRAM1Q8N682 238 aa10.11□□□□□ -0.79
SHCBP1-204ENST00000565887 BEST4Q8NFU0 473 aa10.11□□□□□ -0.79
SHCBP1-204ENST00000565887 OR8H1Q8NGG4 311 aa10.11□□□□□ -0.79
SHCBP1-204ENST00000565887 OR4C13Q8NGP0 309 aa10.11□□□□□ -0.79
SHCBP1-204ENST00000565887 OR2T10Q8NGZ9 312 aa10.11□□□□□ -0.79
SHCBP1-204ENST00000565887 NUDCD2Q8WVJ2 157 aa10.11□□□□□ -0.79
SHCBP1-204ENST00000565887 CYYR1Q96J86 154 aa10.11□□□□□ -0.79
SHCBP1-204ENST00000565887 RBM14Q96PK6 669 aaKnown RBP10.11□□□□□ -0.79
SHCBP1-204ENST00000565887 AGMATQ9BSE5 352 aa10.11□□□□□ -0.79
SHCBP1-204ENST00000565887 PRSS22Q9GZN4 317 aa10.11□□□□□ -0.79
SHCBP1-204ENST00000565887 IFT46Q9NQC8 304 aa10.11□□□□□ -0.79
SHCBP1-204ENST00000565887 ELF5Q9UKW6 265 aaPredicted RBP10.11□□□□□ -0.79
SHCBP1-204ENST00000565887 MRPS7Q9Y2R9 242 aaKnown RBP10.11□□□□□ -0.79
SHCBP1-204ENST00000565887 CLPSL1A2RUU4 121 aa10.1□□□□□ -0.79
SHCBP1-204ENST00000565887 SLC31A2O15432 143 aa10.1□□□□□ -0.79
SHCBP1-204ENST00000565887 RGS5O15539 181 aa10.1□□□□□ -0.79
SHCBP1-204ENST00000565887 SSX5O60225 188 aa10.1□□□□□ -0.79
SHCBP1-204ENST00000565887 MOSP00540 346 aa10.1□□□□□ -0.79
SHCBP1-204ENST00000565887 HLA-DQB1P01920 261 aa10.1□□□□□ -0.79
SHCBP1-204ENST00000565887 EIF4EP06730 217 aaKnown RBP10.1□□□□□ -0.79
SHCBP1-204ENST00000565887 PAX6P26367 422 aa10.1□□□□□ -0.79
SHCBP1-204ENST00000565887 ARPC4P59998 168 aa10.1□□□□□ -0.79
SHCBP1-204ENST00000565887 TAGLNQ01995 201 aaKnown RBP10.1□□□□□ -0.79
SHCBP1-204ENST00000565887 HES1Q14469 280 aa10.1□□□□□ -0.79
SHCBP1-204ENST00000565887 HERPUD1Q15011 391 aa10.1□□□□□ -0.79
SHCBP1-204ENST00000565887 ZNF833PQ6ZTB9 187 aa10.1□□□□□ -0.79
SHCBP1-204ENST00000565887 ODF3L1Q8IXM7 274 aa10.1□□□□□ -0.79
SHCBP1-204ENST00000565887 IZUMO1Q8IYV9 350 aa10.1□□□□□ -0.79
SHCBP1-204ENST00000565887 OR56B4Q8NH76 319 aa10.1□□□□□ -0.79
SHCBP1-204ENST00000565887 CFHR4Q92496 578 aa10.1□□□□□ -0.79
SHCBP1-204ENST00000565887 DGCR14Q96DF8 476 aaKnown RBP10.1□□□□□ -0.79
SHCBP1-204ENST00000565887 NECAP2Q9NVZ3 263 aa10.1□□□□□ -0.79
SHCBP1-204ENST00000565887 OR1A1Q9P1Q5 309 aa10.1□□□□□ -0.79
SHCBP1-204ENST00000565887 RBM7Q9Y580 266 aaKnown RBP10.1□□□□□ -0.79
SHCBP1-204ENST00000565887 A3GALT2U3KPV4 340 aa10.1□□□□□ -0.79
SHCBP1-204ENST00000565887 SNRNP70P08621 437 aaKnown RBP10.09□□□□□ -0.79
SHCBP1-204ENST00000565887 TMEM11P17152 192 aa10.09□□□□□ -0.79
SHCBP1-204ENST00000565887 GPR12P47775 334 aa10.09□□□□□ -0.79
SHCBP1-204ENST00000565887 OR3A3P47888 321 aa10.09□□□□□ -0.79
SHCBP1-204ENST00000565887 TAS2R46P59540 309 aa10.09□□□□□ -0.79
SHCBP1-204ENST00000565887 MRPS10P82664 201 aaKnown RBP10.09□□□□□ -0.79
SHCBP1-204ENST00000565887 AWAT1Q58HT5 328 aa10.09□□□□□ -0.79
SHCBP1-204ENST00000565887 FAM53AQ6NSI3 398 aaPredicted RBP10.09□□□□□ -0.79
SHCBP1-204ENST00000565887 CCBE1Q6UXH8 406 aaPredicted RBP10.09□□□□□ -0.79
SHCBP1-204ENST00000565887 C5orf24Q7Z6I8 188 aa10.09□□□□□ -0.79
SHCBP1-204ENST00000565887 H1FOOQ8IZA3 346 aaPredicted RBP10.09□□□□□ -0.79
SHCBP1-204ENST00000565887 C3orf56Q8N813 242 aa10.09□□□□□ -0.79
SHCBP1-204ENST00000565887 OR5AP2Q8NGF4 316 aa10.09□□□□□ -0.79
SHCBP1-204ENST00000565887 OR2T6Q8NHC8 308 aa10.09□□□□□ -0.79
SHCBP1-204ENST00000565887 MAFIPQ8WZ33 124 aa10.09□□□□□ -0.79
SHCBP1-204ENST00000565887 RNF5Q99942 180 aa10.09□□□□□ -0.79
SHCBP1-204ENST00000565887 SLC25A33Q9BSK2 321 aa10.09□□□□□ -0.79
SHCBP1-204ENST00000565887 IFI27L2Q9H2X8 130 aa10.09□□□□□ -0.79
SHCBP1-204ENST00000565887 OR2W1Q9Y3N9 320 aa10.09□□□□□ -0.79
SHCBP1-204ENST00000565887 SAA2-SAA4A0A096LPE2 208 aa10.08□□□□□ -0.8
SHCBP1-204ENST00000565887 OR5H14A6NHG9 310 aa10.08□□□□□ -0.8
SHCBP1-204ENST00000565887 ST8SIA5O15466 376 aa10.08□□□□□ -0.8
SHCBP1-204ENST00000565887 FGF16O43320 207 aa10.08□□□□□ -0.8
SHCBP1-204ENST00000565887 IGKV1D-33P01593 117 aa10.08□□□□□ -0.8
SHCBP1-204ENST00000565887 IGKV1-33P01594 117 aa10.08□□□□□ -0.8
SHCBP1-204ENST00000565887 OR8U9P0C7N5 309 aa10.08□□□□□ -0.8
SHCBP1-204ENST00000565887 SAA2P0DJI9 122 aaPredicted RBP10.08□□□□□ -0.8
SHCBP1-204ENST00000565887 NAT1P18440 290 aa10.08□□□□□ -0.8
SHCBP1-204ENST00000565887 REG1BP48304 166 aa10.08□□□□□ -0.8
SHCBP1-204ENST00000565887 LUMP51884 338 aaPredicted RBP10.08□□□□□ -0.8
SHCBP1-204ENST00000565887 DIAPH2-AS1Q14236 149 aa10.08□□□□□ -0.8
SHCBP1-204ENST00000565887 Q6ZSV7 163 aa10.08□□□□□ -0.8
SHCBP1-204ENST00000565887 TMEM219Q86XT9 240 aa10.08□□□□□ -0.8
SHCBP1-204ENST00000565887 Q8N2B8 174 aa10.08□□□□□ -0.8
SHCBP1-204ENST00000565887 OR8U1Q8NH10 309 aa10.08□□□□□ -0.8
SHCBP1-204ENST00000565887 GPX8Q8TED1 209 aa10.08□□□□□ -0.8
SHCBP1-204ENST00000565887 BORCS5Q969J3 196 aa10.08□□□□□ -0.8
SHCBP1-204ENST00000565887 ADTRPQ96IZ2 230 aa10.08□□□□□ -0.8
SHCBP1-204ENST00000565887 SLIRPQ9GZT3 109 aaKnown RBP10.08□□□□□ -0.8
SHCBP1-204ENST00000565887 RBM38Q9H0Z9 239 aaKnown RBP10.08□□□□□ -0.8
SHCBP1-204ENST00000565887 MMP27Q9H306 513 aa10.08□□□□□ -0.8
SHCBP1-204ENST00000565887 EXTL2Q9UBQ6 330 aa10.08□□□□□ -0.8
SHCBP1-204ENST00000565887 MOB4Q9Y3A3 225 aa10.08□□□□□ -0.8
SHCBP1-204ENST00000565887 IGKV1D-8A0A087WSZ0 117 aa10.07□□□□□ -0.8
SHCBP1-204ENST00000565887 CTDSP2O14595 271 aa10.07□□□□□ -0.8
SHCBP1-204ENST00000565887 RBBP9O75884 186 aa10.07□□□□□ -0.8
SHCBP1-204ENST00000565887 OR5H8P0DN80 308 aa10.07□□□□□ -0.8
SHCBP1-204ENST00000565887 CD24P25063 80 aa10.07□□□□□ -0.8
SHCBP1-204ENST00000565887 RELBQ01201 579 aa10.07□□□□□ -0.8
SHCBP1-204ENST00000565887 SSBP1Q04837 148 aaKnown RBP10.07□□□□□ -0.8
SHCBP1-204ENST00000565887 LSAMPQ13449 338 aa10.07□□□□□ -0.8
SHCBP1-204ENST00000565887 CDK10Q15131 360 aa10.07□□□□□ -0.8
SHCBP1-204ENST00000565887 GVQW1Q8N7I0 195 aa10.07□□□□□ -0.8
SHCBP1-204ENST00000565887 MCFD2Q8NI22 146 aa10.07□□□□□ -0.8
SHCBP1-204ENST00000565887 LINC01006Q8NI28 216 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms