RNA–Protein interactions for RNA: ENST00000565507.5

SCAPER-215, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 5

Gene SCAPER, Length 2,627 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-215	ENST00000565507	ZNF16	P17020	682 aa	Predicted RBP	11.09	□□□□□ -0.63
SCAPER-215	ENST00000565507	CEACAM6	P40199	344 aa		11.09	□□□□□ -0.63
SCAPER-215	ENST00000565507	ERVS71-1	P61550	626 aa		11.09	□□□□□ -0.63
SCAPER-215	ENST00000565507	ACSF3	Q4G176	576 aa	Predicted RBP	11.09	□□□□□ -0.63
SCAPER-215	ENST00000565507	NANOS1	Q8WY41	292 aa	Known RBP	11.09	□□□□□ -0.63
SCAPER-215	ENST00000565507	RCC1L	Q96I51	464 aa	Known RBP	11.09	□□□□□ -0.63
SCAPER-215	ENST00000565507	OR2J1	Q9GZK6	312 aa		11.09	□□□□□ -0.63
SCAPER-215	ENST00000565507	OR51M1	Q9H341	326 aa		11.09	□□□□□ -0.63
SCAPER-215	ENST00000565507	ASCL3	Q9NQ33	180 aa		11.09	□□□□□ -0.63
SCAPER-215	ENST00000565507	SPRR3	Q9UBC9	169 aa		11.09	□□□□□ -0.63
SCAPER-215	ENST00000565507	KALRN	O60229	2985 aa		11.08	□□□□□ -0.63
SCAPER-215	ENST00000565507	PRR14L	Q5THK1	2151 aa		11.08	□□□□□ -0.63
SCAPER-215	ENST00000565507	ZFP92	A6NM28	416 aa		11.08	□□□□□ -0.64
SCAPER-215	ENST00000565507	KLRC4-KLRK1	H3BQV0	150 aa		11.08	□□□□□ -0.64
SCAPER-215	ENST00000565507		J3QW42	95 aa		11.08	□□□□□ -0.64
SCAPER-215	ENST00000565507	YIF1A	O95070	293 aa		11.08	□□□□□ -0.64
SCAPER-215	ENST00000565507	RAB11A	P62491	216 aa		11.08	□□□□□ -0.64
SCAPER-215	ENST00000565507	SERF2	P84101	59 aa		11.08	□□□□□ -0.64
SCAPER-215	ENST00000565507	ZNF787	Q6DD87	383 aa		11.08	□□□□□ -0.64
SCAPER-215	ENST00000565507	LCN15	Q6UWW0	184 aa		11.08	□□□□□ -0.64
SCAPER-215	ENST00000565507	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	11.08	□□□□□ -0.64
SCAPER-215	ENST00000565507	FGFRL1	Q8N441	504 aa		11.08	□□□□□ -0.64
SCAPER-215	ENST00000565507	CA5BP1	Q8WTZ4	195 aa		11.08	□□□□□ -0.64
SCAPER-215	ENST00000565507	WDR61	Q9GZS3	305 aa	Known RBP	11.08	□□□□□ -0.64
SCAPER-215	ENST00000565507	DEFB127	Q9H1M4	99 aa		11.08	□□□□□ -0.64
SCAPER-215	ENST00000565507	RNF150	Q9ULK6	438 aa		11.08	□□□□□ -0.64
SCAPER-215	ENST00000565507	KCNS2	Q9ULS6	477 aa		11.08	□□□□□ -0.64
SCAPER-215	ENST00000565507	RBM7	Q9Y580	266 aa	Known RBP	11.08	□□□□□ -0.64
SCAPER-215	ENST00000565507	IGF2R	P11717	2491 aa		11.08	□□□□□ -0.64
SCAPER-215	ENST00000565507	TBC1D28	Q2M2D7	210 aa		11.08	□□□□□ -0.64
SCAPER-215	ENST00000565507	ZNF766	Q5HY98	468 aa		11.08	□□□□□ -0.64
SCAPER-215	ENST00000565507	OR4C12	Q96R67	309 aa		11.08	□□□□□ -0.64
SCAPER-215	ENST00000565507	PARD6G	Q9BYG4	376 aa	Predicted RBP	11.08	□□□□□ -0.64
SCAPER-215	ENST00000565507	DOK5	Q9P104	306 aa		11.08	□□□□□ -0.64
SCAPER-215	ENST00000565507	MIOX	Q9UGB7	285 aa		11.08	□□□□□ -0.64
SCAPER-215	ENST00000565507	POLDIP2	Q9Y2S7	368 aa		11.08	□□□□□ -0.64
SCAPER-215	ENST00000565507	IGHV3-64D	A0A0J9YX35	117 aa		11.07	□□□□□ -0.64
SCAPER-215	ENST00000565507		B4DEV8	164 aa		11.07	□□□□□ -0.64
SCAPER-215	ENST00000565507	TM4SF5	O14894	197 aa		11.07	□□□□□ -0.64
SCAPER-215	ENST00000565507	CDX1	P47902	265 aa	Predicted RBP	11.07	□□□□□ -0.64
SCAPER-215	ENST00000565507	FGF8	P55075	233 aa	Predicted RBP	11.07	□□□□□ -0.64
SCAPER-215	ENST00000565507	PPP1CB	P62140	327 aa		11.07	□□□□□ -0.64
SCAPER-215	ENST00000565507	HBG1	P69891	147 aa		11.07	□□□□□ -0.64
SCAPER-215	ENST00000565507	HBG2	P69892	147 aa		11.07	□□□□□ -0.64
SCAPER-215	ENST00000565507	PRR33	A8MZF0	331 aa		11.07	□□□□□ -0.64
SCAPER-215	ENST00000565507	C1QTNF9B	B2RNN3	333 aa		11.07	□□□□□ -0.64
SCAPER-215	ENST00000565507	SH2D1B	O14796	132 aa		11.07	□□□□□ -0.64
SCAPER-215	ENST00000565507	PSPN	O60542	156 aa		11.07	□□□□□ -0.64
SCAPER-215	ENST00000565507	NXPH2	O95156	264 aa		11.07	□□□□□ -0.64
SCAPER-215	ENST00000565507	SELE	P16581	610 aa		11.07	□□□□□ -0.64
SCAPER-215	ENST00000565507	ZNF674	Q2M3X9	581 aa		11.07	□□□□□ -0.64
SCAPER-215	ENST00000565507	SPANXN5	Q5MJ07	72 aa		11.07	□□□□□ -0.64
SCAPER-215	ENST00000565507	TMEM14EP	Q6UXP3	125 aa		11.07	□□□□□ -0.64
SCAPER-215	ENST00000565507	ZNF610	Q8N9Z0	462 aa		11.07	□□□□□ -0.64
SCAPER-215	ENST00000565507	EDARADD	Q8WWZ3	215 aa		11.07	□□□□□ -0.64
SCAPER-215	ENST00000565507	FAM90A26	D6RGX4	464 aa		11.06	□□□□□ -0.64
SCAPER-215	ENST00000565507	HIST1H2BK	O60814	126 aa		11.06	□□□□□ -0.64
SCAPER-215	ENST00000565507	HIST1H2BJ	P06899	126 aa		11.06	□□□□□ -0.64
SCAPER-215	ENST00000565507		P0C879	139 aa		11.06	□□□□□ -0.64
SCAPER-215	ENST00000565507	HIST1H2BO	P23527	126 aa		11.06	□□□□□ -0.64
SCAPER-215	ENST00000565507	HIST1H2BB	P33778	126 aa		11.06	□□□□□ -0.64
SCAPER-215	ENST00000565507	HIST1H2BD	P58876	126 aa		11.06	□□□□□ -0.64
SCAPER-215	ENST00000565507	HIST1H2BC	P62807	126 aa		11.06	□□□□□ -0.64
SCAPER-215	ENST00000565507	HIST2H2BE	Q16778	126 aa		11.06	□□□□□ -0.64
SCAPER-215	ENST00000565507	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	11.06	□□□□□ -0.64
SCAPER-215	ENST00000565507	LILRB2	Q8N423	598 aa		11.06	□□□□□ -0.64
SCAPER-215	ENST00000565507	HIST1H2BH	Q93079	126 aa		11.06	□□□□□ -0.64
SCAPER-215	ENST00000565507	C5orf30	Q96GV9	206 aa		11.06	□□□□□ -0.64
SCAPER-215	ENST00000565507	HIST1H2BN	Q99877	126 aa		11.06	□□□□□ -0.64
SCAPER-215	ENST00000565507	HIST1H2BM	Q99879	126 aa		11.06	□□□□□ -0.64
SCAPER-215	ENST00000565507	BCL2L14	Q9BZR8	327 aa		11.06	□□□□□ -0.64
SCAPER-215	ENST00000565507	TMEM242	Q9NWH2	141 aa		11.06	□□□□□ -0.64
SCAPER-215	ENST00000565507	RAMP3	O60896	148 aa		11.06	□□□□□ -0.64
SCAPER-215	ENST00000565507	IGHV2-70	P01814	119 aa		11.06	□□□□□ -0.64
SCAPER-215	ENST00000565507	CEBPD	P49716	269 aa	Predicted RBP	11.06	□□□□□ -0.64
SCAPER-215	ENST00000565507	CCL11	P51671	97 aa		11.06	□□□□□ -0.64
SCAPER-215	ENST00000565507	RND2	P52198	227 aa		11.06	□□□□□ -0.64
SCAPER-215	ENST00000565507	PNRC1	Q12796	327 aa	Predicted RBP	11.06	□□□□□ -0.64
SCAPER-215	ENST00000565507	EIF4EBP1	Q13541	118 aa	Predicted RBP	11.06	□□□□□ -0.64
SCAPER-215	ENST00000565507	TMEM41B	Q5BJD5	291 aa		11.06	□□□□□ -0.64
SCAPER-215	ENST00000565507	TAF15	Q92804	592 aa	Known RBP eCLIP	11.06	□□□□□ -0.64
SCAPER-215	ENST00000565507	P2RX4	Q99571	388 aa		11.06	□□□□□ -0.64
SCAPER-215	ENST00000565507	GGACT	Q9BVM4	153 aa		11.06	□□□□□ -0.64
SCAPER-215	ENST00000565507	TOLLIP	Q9H0E2	274 aa		11.06	□□□□□ -0.64
SCAPER-215	ENST00000565507	HES4	Q9HCC6	221 aa		11.06	□□□□□ -0.64
SCAPER-215	ENST00000565507	SDF2L1	Q9HCN8	221 aa		11.06	□□□□□ -0.64
SCAPER-215	ENST00000565507	GTF3C1	Q12789	2109 aa		11.06	□□□□□ -0.64
SCAPER-215	ENST00000565507	KIAA2026	Q5HYC2	2103 aa		11.06	□□□□□ -0.64
SCAPER-215	ENST00000565507	CYB5B	O43169	146 aa		11.05	□□□□□ -0.64
SCAPER-215	ENST00000565507	IGKV1D-33	P01593	117 aa		11.05	□□□□□ -0.64
SCAPER-215	ENST00000565507	IGKV1-33	P01594	117 aa		11.05	□□□□□ -0.64
SCAPER-215	ENST00000565507	RAC2	P15153	192 aa		11.05	□□□□□ -0.64
SCAPER-215	ENST00000565507	S100P	P25815	95 aa		11.05	□□□□□ -0.64
SCAPER-215	ENST00000565507	IDH3G	P51553	393 aa	Predicted RBP	11.05	□□□□□ -0.64
SCAPER-215	ENST00000565507	NDUFA6	P56556	154 aa		11.05	□□□□□ -0.64
SCAPER-215	ENST00000565507	TNFRSF9	Q07011	255 aa		11.05	□□□□□ -0.64
SCAPER-215	ENST00000565507	PSG7	Q13046	419 aa		11.05	□□□□□ -0.64
SCAPER-215	ENST00000565507	FAM53A	Q6NSI3	398 aa	Predicted RBP	11.05	□□□□□ -0.64
SCAPER-215	ENST00000565507	RPP25L	Q8N5L8	163 aa	Known RBP	11.05	□□□□□ -0.64
SCAPER-215	ENST00000565507	SLC25A40	Q8TBP6	338 aa		11.05	□□□□□ -0.64

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