RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 TRAM1Q15629 374 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 HMGN3Q15651 99 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 C5orf64Q2M2E5 130 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 C2orf76Q3KRA6 126 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 RPL39P5Q59GN2 51 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 LY6G6FQ5SQ64 297 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 C11orf87Q6NUJ2 197 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 ZNF833PQ6ZTB9 187 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 ZNF491Q8N8L2 437 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 RNF152Q8N8N0 203 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 DRAXINQ8NBI3 349 aaPredicted RBP5.01□□□□□ -1.61
TCF4-228ENST00000565393 NPBQ8NG41 125 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 OR6M1Q8NGM8 313 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 ABHD14BQ96IU4 210 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 UBE2E2Q96LR5 201 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 MS4A10Q96PG2 267 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 CMSS1Q9BQ75 279 aaKnown RBP5.01□□□□□ -1.61
TCF4-228ENST00000565393 HDHD3Q9BSH5 251 aaPredicted RBP5.01□□□□□ -1.61
TCF4-228ENST00000565393 TM2D1Q9BX74 207 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 GHITMQ9H3K2 345 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 FBXL15Q9H469 300 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 ZNF355PQ9NSJ1 428 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 SLC23A1Q9UHI7 598 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 AK3Q9UIJ7 227 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 ZNF221Q9UK13 617 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 VSIG4Q9Y279 399 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 A3GALT2U3KPV4 340 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 A0A1W2PN81 502 aa5□□□□□ -1.61
TCF4-228ENST00000565393 TMEM14DPA8MWL7 114 aa5□□□□□ -1.61
TCF4-228ENST00000565393 TRDCB7Z8K6 153 aa5□□□□□ -1.61
TCF4-228ENST00000565393 FCN1O00602 326 aa5□□□□□ -1.61
TCF4-228ENST00000565393 SLC17A2O00624 439 aa5□□□□□ -1.61
TCF4-228ENST00000565393 RRHO14718 337 aa5□□□□□ -1.61
TCF4-228ENST00000565393 DENRO43583 198 aaKnown RBP5□□□□□ -1.61
TCF4-228ENST00000565393 NAPSAO96009 420 aa5□□□□□ -1.61
TCF4-228ENST00000565393 OR8U8P0C7N1 319 aa5□□□□□ -1.61
TCF4-228ENST00000565393 NHLRC4P0CG21 123 aaPredicted RBP5□□□□□ -1.61
TCF4-228ENST00000565393 CALRP27797 417 aaKnown RBP5□□□□□ -1.61
TCF4-228ENST00000565393 CHRNA7P36544 502 aa5□□□□□ -1.61
TCF4-228ENST00000565393 MAP2K4P45985 399 aa5□□□□□ -1.61
TCF4-228ENST00000565393 PSMD7P51665 324 aa5□□□□□ -1.61
TCF4-228ENST00000565393 CLDN12P56749 244 aa5□□□□□ -1.61
TCF4-228ENST00000565393 RPS25P62851 125 aaKnown RBP5□□□□□ -1.61
TCF4-228ENST00000565393 QRFPP83859 136 aa5□□□□□ -1.61
TCF4-228ENST00000565393 CFHR3Q02985 330 aa5□□□□□ -1.61
TCF4-228ENST00000565393 ZNF616Q08AN1 781 aa5□□□□□ -1.61
TCF4-228ENST00000565393 UNC119Q13432 240 aa5□□□□□ -1.61
TCF4-228ENST00000565393 TPBGQ13641 420 aa5□□□□□ -1.61
TCF4-228ENST00000565393 RAB11BQ15907 218 aa5□□□□□ -1.61
TCF4-228ENST00000565393 ECSCRQ19T08 205 aa5□□□□□ -1.61
TCF4-228ENST00000565393 ZNF660Q6AZW8 331 aaPredicted RBP5□□□□□ -1.61
TCF4-228ENST00000565393 FAM131AQ6UXB0 335 aa5□□□□□ -1.61
TCF4-228ENST00000565393 TMEM91Q6ZNR0 172 aa5□□□□□ -1.61
TCF4-228ENST00000565393 PPP1R27Q86WC6 154 aa5□□□□□ -1.61
TCF4-228ENST00000565393 SVOPQ8N4V2 548 aa5□□□□□ -1.61
TCF4-228ENST00000565393 FAM89BQ8N5H3 189 aa5□□□□□ -1.61
TCF4-228ENST00000565393 OR56B1Q8NGI3 324 aa5□□□□□ -1.61
TCF4-228ENST00000565393 CASTOR1Q8WTX7 329 aa5□□□□□ -1.61
TCF4-228ENST00000565393 EDARADDQ8WWZ3 215 aa5□□□□□ -1.61
TCF4-228ENST00000565393 FAM3DQ96BQ1 224 aa5□□□□□ -1.61
TCF4-228ENST00000565393 PRR25Q96S07 402 aa5□□□□□ -1.61
TCF4-228ENST00000565393 MGLLQ99685 303 aa5□□□□□ -1.61
TCF4-228ENST00000565393 ASCL2Q99929 193 aa5□□□□□ -1.61
TCF4-228ENST00000565393 B9D2Q9BPU9 175 aa5□□□□□ -1.61
TCF4-228ENST00000565393 PECRQ9BY49 303 aa5□□□□□ -1.61
TCF4-228ENST00000565393 C11orf54Q9H0W9 315 aaPredicted RBP5□□□□□ -1.61
TCF4-228ENST00000565393 LPAR5Q9H1C0 372 aa5□□□□□ -1.61
TCF4-228ENST00000565393 IFI27L2Q9H2X8 130 aa5□□□□□ -1.61
TCF4-228ENST00000565393 DUSP21Q9H596 190 aa5□□□□□ -1.61
TCF4-228ENST00000565393 GNB4Q9HAV0 340 aa5□□□□□ -1.61
TCF4-228ENST00000565393 Q9N2K0 584 aa5□□□□□ -1.61
TCF4-228ENST00000565393 ISYNA1Q9NPH2 558 aa5□□□□□ -1.61
TCF4-228ENST00000565393 OR1A1Q9P1Q5 309 aa5□□□□□ -1.61
TCF4-228ENST00000565393 METTL1Q9UBP6 276 aaKnown RBP5□□□□□ -1.61
TCF4-228ENST00000565393 SCOCQ9UIL1 159 aa5□□□□□ -1.61
TCF4-228ENST00000565393 HSF4Q9ULV5 492 aa5□□□□□ -1.61
TCF4-228ENST00000565393 MGAT4AQ9UM21 535 aa5□□□□□ -1.61
TCF4-228ENST00000565393 LSM2Q9Y333 95 aaKnown RBP5□□□□□ -1.61
TCF4-228ENST00000565393 WASHC3Q9Y3C0 194 aa5□□□□□ -1.61
TCF4-228ENST00000565393 V9GY05 133 aa5□□□□□ -1.61
TCF4-228ENST00000565393 ANK2Q01484 3957 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 A0A0A6YYD4 124 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 OR5H14A6NHG9 310 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 H0YJW9 148 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 PDCD5O14737 125 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 BET1O15155 118 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 SAP30O75446 220 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 CNIH1O95406 144 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 IGLV1-40P01703 118 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 HLA-DRB1P01911 266 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 CD3GP09693 182 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 OR8U9P0C7N5 309 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 CD37P11049 281 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 CPEP16870 476 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 PSMA1P25786 263 aaKnown RBP4.99□□□□□ -1.61
TCF4-228ENST00000565393 TALDO1P37837 337 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 INSL3P51460 131 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 AQP4P55087 323 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 TMEM50BP56557 158 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 LINC00205P59089 165 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms