RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 HS3ST6Q96QI5 342 aa13.86□□□□□ -0.19
LINC00554-201ENST00000564841 UCN2Q96RP3 112 aa13.86□□□□□ -0.19
LINC00554-201ENST00000564841 VAMP8Q9BV40 100 aa13.86□□□□□ -0.19
LINC00554-201ENST00000564841 ZNF816-ZNF321PA0A0X1KG74 233 aa13.86□□□□□ -0.19
LINC00554-201ENST00000564841 EIF3IQ13347 325 aaKnown RBP13.86□□□□□ -0.19
LINC00554-201ENST00000564841 OR8G2PQ6IF36 304 aa13.86□□□□□ -0.19
LINC00554-201ENST00000564841 CENPVQ7Z7K6 275 aaPredicted RBP13.86□□□□□ -0.19
LINC00554-201ENST00000564841 C22orf15Q8WYQ4 148 aa13.86□□□□□ -0.19
LINC00554-201ENST00000564841 PP6455Q8WZ26 134 aa13.86□□□□□ -0.19
LINC00554-201ENST00000564841 CACNA1GO43497 2377 aa13.86□□□□□ -0.19
LINC00554-201ENST00000564841 PAGE4O60829 102 aa13.85□□□□□ -0.19
LINC00554-201ENST00000564841 IGLV3-1P01715 115 aa13.85□□□□□ -0.19
LINC00554-201ENST00000564841 COL5A1-AS1Q5SY13 56 aa13.85□□□□□ -0.19
LINC00554-201ENST00000564841 ZNF114Q8NC26 417 aa13.85□□□□□ -0.19
LINC00554-201ENST00000564841 C20orf144Q9BQM9 153 aa13.85□□□□□ -0.19
LINC00554-201ENST00000564841 ALKBH4Q9NXW9 302 aa13.85□□□□□ -0.19
LINC00554-201ENST00000564841 PLEK2Q9NYT0 353 aa13.85□□□□□ -0.19
LINC00554-201ENST00000564841 PCNX2A6NKB5 2137 aa13.85□□□□□ -0.19
LINC00554-201ENST00000564841 M0R135 149 aa13.85□□□□□ -0.19
LINC00554-201ENST00000564841 OTX2P32243 289 aa13.85□□□□□ -0.19
LINC00554-201ENST00000564841 MPLP40238 635 aa13.85□□□□□ -0.19
LINC00554-201ENST00000564841 GRB2P62993 217 aaKnown RBP13.85□□□□□ -0.19
LINC00554-201ENST00000564841 SSPNQ14714 243 aa13.85□□□□□ -0.19
LINC00554-201ENST00000564841 DAZAP2Q15038 168 aaPredicted RBP13.85□□□□□ -0.19
LINC00554-201ENST00000564841 SPANXN5Q5MJ07 72 aa13.85□□□□□ -0.19
LINC00554-201ENST00000564841 ZNF799Q96GE5 643 aa13.85□□□□□ -0.19
LINC00554-201ENST00000564841 ALKBH3Q96Q83 286 aaPredicted RBP13.85□□□□□ -0.19
LINC00554-201ENST00000564841 HIPK2Q9H2X6 1198 aa13.85□□□□□ -0.19
LINC00554-201ENST00000564841 BOD1L1Q8NFC6 3051 aa13.85□□□□□ -0.19
LINC00554-201ENST00000564841 C20orf202A1L168 122 aa13.85□□□□□ -0.19
LINC00554-201ENST00000564841 SLC22A20A6NK97 555 aa13.85□□□□□ -0.19
LINC00554-201ENST00000564841 SERF1AO75920 110 aa13.85□□□□□ -0.19
LINC00554-201ENST00000564841 ZFAND5O76080 213 aa13.85□□□□□ -0.19
LINC00554-201ENST00000564841 ACSM6Q6P461 480 aa13.85□□□□□ -0.19
LINC00554-201ENST00000564841 TEX43Q6ZNM6 134 aa13.85□□□□□ -0.19
LINC00554-201ENST00000564841 OSR2Q8N2R0 312 aa13.85□□□□□ -0.19
LINC00554-201ENST00000564841 SLC35E1Q96K37 410 aa13.85□□□□□ -0.19
LINC00554-201ENST00000564841 DOCK7Q96N67 2140 aa13.84□□□□□ -0.19
LINC00554-201ENST00000564841 TCN2P20062 427 aa13.84□□□□□ -0.19
LINC00554-201ENST00000564841 CBLN1P23435 193 aa13.84□□□□□ -0.19
LINC00554-201ENST00000564841 COL8A2P25067 703 aa13.84□□□□□ -0.19
LINC00554-201ENST00000564841 SAPCD1Q5SSQ6 148 aa13.84□□□□□ -0.19
LINC00554-201ENST00000564841 TMEM9BQ9NQ34 198 aa13.84□□□□□ -0.19
LINC00554-201ENST00000564841 IL36RNQ9UBH0 155 aa13.84□□□□□ -0.19
LINC00554-201ENST00000564841 PXMP4Q9Y6I8 212 aa13.84□□□□□ -0.19
LINC00554-201ENST00000564841 KIAA1324LA8MWY0 1029 aaPredicted RBP13.84□□□□□ -0.19
LINC00554-201ENST00000564841 SH2D1BO14796 132 aa13.84□□□□□ -0.19
LINC00554-201ENST00000564841 PSG2P11465 335 aa13.84□□□□□ -0.19
LINC00554-201ENST00000564841 LYG1Q8N1E2 194 aa13.84□□□□□ -0.19
LINC00554-201ENST00000564841 BORCS8Q96FH0 119 aa13.84□□□□□ -0.19
LINC00554-201ENST00000564841 TMEM204Q9BSN7 226 aa13.84□□□□□ -0.19
LINC00554-201ENST00000564841 CACNG5Q9UF02 275 aa13.84□□□□□ -0.19
LINC00554-201ENST00000564841 IGLV3-12A0A075B6K2 115 aa13.83□□□□□ -0.19
LINC00554-201ENST00000564841 M0R296 226 aa13.83□□□□□ -0.19
LINC00554-201ENST00000564841 COMPP49747 757 aaPredicted RBP13.83□□□□□ -0.19
LINC00554-201ENST00000564841 UBE2G2P60604 165 aa13.83□□□□□ -0.19
LINC00554-201ENST00000564841 PLPPR5Q32ZL2 321 aa13.83□□□□□ -0.19
LINC00554-201ENST00000564841 UNQ5815/PRO19632Q6UWF5 114 aa13.83□□□□□ -0.19
LINC00554-201ENST00000564841 PSENENQ9NZ42 101 aa13.83□□□□□ -0.19
LINC00554-201ENST00000564841 ERRFI1Q9UJM3 462 aaPredicted RBP13.83□□□□□ -0.19
LINC00554-201ENST00000564841 IFNA1P01562 189 aa13.83□□□□□ -0.2
LINC00554-201ENST00000564841 MALLQ13021 153 aa13.83□□□□□ -0.2
LINC00554-201ENST00000564841 OR5P3Q8WZ94 311 aa13.83□□□□□ -0.2
LINC00554-201ENST00000564841 WDYHV1Q96HA8 205 aa13.83□□□□□ -0.2
LINC00554-201ENST00000564841 RNF24Q9Y225 148 aa13.83□□□□□ -0.2
LINC00554-201ENST00000564841 GTF3C1Q12789 2109 aa13.83□□□□□ -0.2
LINC00554-201ENST00000564841 WNT2P09544 360 aa13.82□□□□□ -0.2
LINC00554-201ENST00000564841 OR5G3P0C626 314 aa13.82□□□□□ -0.2
LINC00554-201ENST00000564841 PSMB3P49720 205 aa13.82□□□□□ -0.2
LINC00554-201ENST00000564841 CARD18P57730 90 aa13.82□□□□□ -0.2
LINC00554-201ENST00000564841 BPIFB3P59826 476 aa13.82□□□□□ -0.2
LINC00554-201ENST00000564841 KRTDAPP60985 99 aa13.82□□□□□ -0.2
LINC00554-201ENST00000564841 ZNF468Q5VIY5 522 aaPredicted RBP13.82□□□□□ -0.2
LINC00554-201ENST00000564841 SGMS2Q8NHU3 365 aa13.82□□□□□ -0.2
LINC00554-201ENST00000564841 UBALD1Q8TB05 177 aa13.82□□□□□ -0.2
LINC00554-201ENST00000564841 AGMATQ9BSE5 352 aa13.82□□□□□ -0.2
LINC00554-201ENST00000564841 LNP1A1A4G5 178 aa13.82□□□□□ -0.2
LINC00554-201ENST00000564841 NAPSAO96009 420 aa13.82□□□□□ -0.2
LINC00554-201ENST00000564841 TYMSP04818 313 aa13.82□□□□□ -0.2
LINC00554-201ENST00000564841 UCP1P25874 307 aa13.82□□□□□ -0.2
LINC00554-201ENST00000564841 THBS3P49746 956 aa13.82□□□□□ -0.2
LINC00554-201ENST00000564841 SRPXP78539 464 aa13.82□□□□□ -0.2
LINC00554-201ENST00000564841 TMEM183BQ1AE95 376 aa13.82□□□□□ -0.2
LINC00554-201ENST00000564841 FFAR4Q5NUL3 377 aa13.82□□□□□ -0.2
LINC00554-201ENST00000564841 DSPP15924 2871 aaKnown RBP13.82□□□□□ -0.2
LINC00554-201ENST00000564841 IGKV1-6A0A0C4DH72 117 aa13.82□□□□□ -0.2
LINC00554-201ENST00000564841 LRRC75BQ2VPJ9 315 aa13.82□□□□□ -0.2
LINC00554-201ENST00000564841 ST8SIA1Q92185 356 aa13.82□□□□□ -0.2
LINC00554-201ENST00000564841 ZDHHC11Q9H8X9 412 aa13.82□□□□□ -0.2
LINC00554-201ENST00000564841 C19orf25Q9UFG5 118 aaPredicted RBP13.82□□□□□ -0.2
LINC00554-201ENST00000564841 ADAMTS20P59510 1910 aa13.82□□□□□ -0.2
LINC00554-201ENST00000564841 ZFHX4Q86UP3 3567 aa13.82□□□□□ -0.2
LINC00554-201ENST00000564841 M0QZ24 198 aa13.81□□□□□ -0.2
LINC00554-201ENST00000564841 PDCD6O75340 191 aa13.81□□□□□ -0.2
LINC00554-201ENST00000564841 PGLYRP1O75594 196 aaPredicted RBP13.81□□□□□ -0.2
LINC00554-201ENST00000564841 DUSP3P51452 185 aaPredicted RBP13.81□□□□□ -0.2
LINC00554-201ENST00000564841 AARDQ4LEZ3 155 aa13.81□□□□□ -0.2
LINC00554-201ENST00000564841 BTF3L4Q96K17 158 aa13.81□□□□□ -0.2
LINC00554-201ENST00000564841 WDR61Q9GZS3 305 aaKnown RBP13.81□□□□□ -0.2
LINC00554-201ENST00000564841 RP1L1Q8IWN7 2480 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms