RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 BVESQ8NE79 360 aa10.49□□□□□ -0.73
CLK3-214ENST00000564096 LEAP2Q969E1 77 aa10.49□□□□□ -0.73
CLK3-214ENST00000564096 S1PR3Q99500 378 aa10.49□□□□□ -0.73
CLK3-214ENST00000564096 PCGF1Q9BSM1 259 aa10.49□□□□□ -0.73
CLK3-214ENST00000564096 PARP12Q9H0J9 701 aaKnown RBP10.49□□□□□ -0.73
CLK3-214ENST00000564096 SIRPDQ9H106 197 aa10.49□□□□□ -0.73
CLK3-214ENST00000564096 ALX4Q9H161 411 aaPredicted RBP10.49□□□□□ -0.73
CLK3-214ENST00000564096 C5orf66Q9H5L9 145 aa10.49□□□□□ -0.73
CLK3-214ENST00000564096 MMP26Q9NRE1 261 aa10.49□□□□□ -0.73
CLK3-214ENST00000564096 LIN7CQ9NUP9 197 aaKnown RBP10.49□□□□□ -0.73
CLK3-214ENST00000564096 FLVCR2Q9UPI3 526 aa10.49□□□□□ -0.73
CLK3-214ENST00000564096 CRYBG3Q68DQ2 2970 aa10.49□□□□□ -0.73
CLK3-214ENST00000564096 PIGBOS1A0A0B4J2F0 54 aa10.48□□□□□ -0.73
CLK3-214ENST00000564096 J3QR06 171 aa10.48□□□□□ -0.73
CLK3-214ENST00000564096 CREBL2O60519 120 aaPredicted RBP10.48□□□□□ -0.73
CLK3-214ENST00000564096 B3GALNT1O75752 331 aa10.48□□□□□ -0.73
CLK3-214ENST00000564096 IGHV3-7P01780 117 aa10.48□□□□□ -0.73
CLK3-214ENST00000564096 HLA-AP01891 365 aaKnown RBP10.48□□□□□ -0.73
CLK3-214ENST00000564096 AKR1C4P17516 323 aa10.48□□□□□ -0.73
CLK3-214ENST00000564096 PI3P19957 117 aa10.48□□□□□ -0.73
CLK3-214ENST00000564096 ANXA7P20073 488 aaKnown RBP10.48□□□□□ -0.73
CLK3-214ENST00000564096 VAMP1P23763 118 aa10.48□□□□□ -0.73
CLK3-214ENST00000564096 PHLDA2Q53GA4 152 aa10.48□□□□□ -0.73
CLK3-214ENST00000564096 SLC25A42Q86VD7 318 aa10.48□□□□□ -0.73
CLK3-214ENST00000564096 PNKDQ8N490 385 aa10.48□□□□□ -0.73
CLK3-214ENST00000564096 C11orf42Q8N5U0 333 aa10.48□□□□□ -0.73
CLK3-214ENST00000564096 Q8N7P7 452 aa10.48□□□□□ -0.73
CLK3-214ENST00000564096 RTN4IP1Q8WWV3 396 aaPredicted RBP10.48□□□□□ -0.73
CLK3-214ENST00000564096 CCL28Q9NRJ3 127 aa10.48□□□□□ -0.73
CLK3-214ENST00000564096 HIF1ANQ9NWT6 349 aa10.48□□□□□ -0.73
CLK3-214ENST00000564096 AUP1Q9Y679 476 aa10.48□□□□□ -0.73
CLK3-214ENST00000564096 SAA2-SAA4A0A096LPE2 208 aa10.47□□□□□ -0.73
CLK3-214ENST00000564096 A0A1W2PPE3 182 aa10.47□□□□□ -0.73
CLK3-214ENST00000564096 SLC31A2O15432 143 aa10.47□□□□□ -0.73
CLK3-214ENST00000564096 TXNL1O43396 289 aa10.47□□□□□ -0.73
CLK3-214ENST00000564096 IL5P05113 134 aa10.47□□□□□ -0.73
CLK3-214ENST00000564096 OR4E1P0C645 316 aa10.47□□□□□ -0.73
CLK3-214ENST00000564096 SAA2P0DJI9 122 aaPredicted RBP10.47□□□□□ -0.73
CLK3-214ENST00000564096 IGHV4-31P0DP07 118 aa10.47□□□□□ -0.73
CLK3-214ENST00000564096 MMP9P14780 707 aa10.47□□□□□ -0.73
CLK3-214ENST00000564096 ZNF16P17020 682 aaPredicted RBP10.47□□□□□ -0.73
CLK3-214ENST00000564096 HOXB4P17483 251 aaPredicted RBP10.47□□□□□ -0.73
CLK3-214ENST00000564096 GNRHRP30968 328 aa10.47□□□□□ -0.73
CLK3-214ENST00000564096 CEACAM3P40198 252 aa10.47□□□□□ -0.73
CLK3-214ENST00000564096 SRPXP78539 464 aa10.47□□□□□ -0.73
CLK3-214ENST00000564096 PAX8Q06710 450 aa10.47□□□□□ -0.73
CLK3-214ENST00000564096 HLA-DRB5Q30154 266 aa10.47□□□□□ -0.73
CLK3-214ENST00000564096 CT45A1Q5HYN5 189 aa10.47□□□□□ -0.73
CLK3-214ENST00000564096 CYB5R2Q6BCY4 276 aa10.47□□□□□ -0.73
CLK3-214ENST00000564096 GLDNQ6ZMI3 551 aaPredicted RBP10.47□□□□□ -0.73
CLK3-214ENST00000564096 ZNF66Q6ZN08 573 aa10.47□□□□□ -0.73
CLK3-214ENST00000564096 Q6ZNX1 250 aa10.47□□□□□ -0.73
CLK3-214ENST00000564096 DRAM1Q8N682 238 aa10.47□□□□□ -0.73
CLK3-214ENST00000564096 OR11H6Q8NGC7 330 aa10.47□□□□□ -0.73
CLK3-214ENST00000564096 CT45A3Q8NHU0 189 aa10.47□□□□□ -0.73
CLK3-214ENST00000564096 ADTRPQ96IZ2 230 aa10.47□□□□□ -0.73
CLK3-214ENST00000564096 HSD17B10Q99714 261 aaKnown RBP10.47□□□□□ -0.73
CLK3-214ENST00000564096 AGMATQ9BSE5 352 aa10.47□□□□□ -0.73
CLK3-214ENST00000564096 RTBDNQ9BSG5 229 aaPredicted RBP10.47□□□□□ -0.73
CLK3-214ENST00000564096 NAA60Q9H7X0 242 aa10.47□□□□□ -0.73
CLK3-214ENST00000564096 RNF150Q9ULK6 438 aa10.47□□□□□ -0.73
CLK3-214ENST00000564096 GAB2Q9UQC2 676 aa10.47□□□□□ -0.73
CLK3-214ENST00000564096 KCNIP3Q9Y2W7 256 aa10.47□□□□□ -0.73
CLK3-214ENST00000564096 MALRD1Q5VYJ5 2156 aa10.47□□□□□ -0.73
CLK3-214ENST00000564096 CELSR2Q9HCU4 2923 aa10.47□□□□□ -0.73
CLK3-214ENST00000564096 POLQO75417 2590 aa10.46□□□□□ -0.73
CLK3-214ENST00000564096 CRYM-AS1A6NIL9 109 aa10.46□□□□□ -0.73
CLK3-214ENST00000564096 M0R1X1 148 aa10.46□□□□□ -0.73
CLK3-214ENST00000564096 TGFAP01135 160 aa10.46□□□□□ -0.73
CLK3-214ENST00000564096 IFNA2P01563 188 aa10.46□□□□□ -0.73
CLK3-214ENST00000564096 ARG1P05089 322 aa10.46□□□□□ -0.73
CLK3-214ENST00000564096 ZNF134P52741 427 aa10.46□□□□□ -0.73
CLK3-214ENST00000564096 LGALS4P56470 323 aa10.46□□□□□ -0.73
CLK3-214ENST00000564096 PPP1R1AQ13522 171 aa10.46□□□□□ -0.73
CLK3-214ENST00000564096 ZNF626Q68DY1 528 aa10.46□□□□□ -0.73
CLK3-214ENST00000564096 FAM53AQ6NSI3 398 aaPredicted RBP10.46□□□□□ -0.73
CLK3-214ENST00000564096 KCTD9Q7L273 389 aa10.46□□□□□ -0.73
CLK3-214ENST00000564096 LYG2Q86SG7 212 aa10.46□□□□□ -0.73
CLK3-214ENST00000564096 TBC1D26Q86UD7 250 aa10.46□□□□□ -0.73
CLK3-214ENST00000564096 TEX29Q8N6K0 151 aa10.46□□□□□ -0.73
CLK3-214ENST00000564096 ADAD2Q8NCV1 583 aaKnown RBP10.46□□□□□ -0.73
CLK3-214ENST00000564096 MAPK1IP1LQ8NDC0 245 aa10.46□□□□□ -0.73
CLK3-214ENST00000564096 COQ8AQ8NI60 647 aa10.46□□□□□ -0.73
CLK3-214ENST00000564096 MSI2Q96DH6 328 aaKnown RBP10.46□□□□□ -0.73
CLK3-214ENST00000564096 ABHD14BQ96IU4 210 aa10.46□□□□□ -0.73
CLK3-214ENST00000564096 BEX2Q9BXY8 128 aa10.46□□□□□ -0.73
CLK3-214ENST00000564096 C7orf69Q9H7B7 122 aa10.46□□□□□ -0.73
CLK3-214ENST00000564096 BEX1Q9HBH7 125 aa10.46□□□□□ -0.73
CLK3-214ENST00000564096 SDHAF2Q9NX18 166 aa10.46□□□□□ -0.73
CLK3-214ENST00000564096 ITGB1BP2Q9UKP3 347 aa10.46□□□□□ -0.73
CLK3-214ENST00000564096 CENPEQ02224 2701 aa10.46□□□□□ -0.74
CLK3-214ENST00000564096 APCP25054 2843 aa10.45□□□□□ -0.74
CLK3-214ENST00000564096 DSCAML1Q8TD84 2053 aa10.45□□□□□ -0.74
CLK3-214ENST00000564096 C7orf66A4D0T2 115 aa10.45□□□□□ -0.74
CLK3-214ENST00000564096 SNRPGP15A8MWD9 76 aa10.45□□□□□ -0.74
CLK3-214ENST00000564096 ODF3BA8MYP8 253 aa10.45□□□□□ -0.74
CLK3-214ENST00000564096 H0Y980 276 aa10.45□□□□□ -0.74
CLK3-214ENST00000564096 MPPED1O15442 326 aa10.45□□□□□ -0.74
CLK3-214ENST00000564096 TNFSF12O43508 249 aa10.45□□□□□ -0.74
CLK3-214ENST00000564096 SFT2D2O95562 160 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms