RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 FAM106CPP0CH98 169 aa6.8□□□□□ -1.32
UBR1-204ENST00000563239 SAA2P0DJI9 122 aaPredicted RBP6.8□□□□□ -1.32
UBR1-204ENST00000563239 PTHLHP12272 177 aa6.8□□□□□ -1.32
UBR1-204ENST00000563239 DTYMKP23919 212 aa6.8□□□□□ -1.32
UBR1-204ENST00000563239 ZBTB25P24278 435 aa6.8□□□□□ -1.32
UBR1-204ENST00000563239 IL3RAP26951 378 aa6.8□□□□□ -1.32
UBR1-204ENST00000563239 CD1BP29016 333 aa6.8□□□□□ -1.32
UBR1-204ENST00000563239 ARHGDIBP52566 201 aa6.8□□□□□ -1.32
UBR1-204ENST00000563239 ARFRP1Q13795 201 aa6.8□□□□□ -1.32
UBR1-204ENST00000563239 HNF4GQ14541 408 aa6.8□□□□□ -1.32
UBR1-204ENST00000563239 SPCS2Q15005 226 aa6.8□□□□□ -1.32
UBR1-204ENST00000563239 ARL6IP1Q15041 203 aa6.8□□□□□ -1.32
UBR1-204ENST00000563239 PNLIPRP3Q17RR3 467 aa6.8□□□□□ -1.32
UBR1-204ENST00000563239 RPL39P5Q59GN2 51 aa6.8□□□□□ -1.32
UBR1-204ENST00000563239 SHISA2Q6UWI4 295 aa6.8□□□□□ -1.32
UBR1-204ENST00000563239 C16orf82Q7Z2V1 217 aa6.8□□□□□ -1.32
UBR1-204ENST00000563239 GPR141Q7Z602 305 aa6.8□□□□□ -1.32
UBR1-204ENST00000563239 TGIF2LXQ8IUE1 241 aa6.8□□□□□ -1.32
UBR1-204ENST00000563239 DTX3Q8N9I9 347 aa6.8□□□□□ -1.32
UBR1-204ENST00000563239 OR2AK2Q8NG84 335 aa6.8□□□□□ -1.32
UBR1-204ENST00000563239 ABHD14BQ96IU4 210 aa6.8□□□□□ -1.32
UBR1-204ENST00000563239 EAF1Q96JC9 268 aaPredicted RBP6.8□□□□□ -1.32
UBR1-204ENST00000563239 RITA1Q96K30 269 aa6.8□□□□□ -1.32
UBR1-204ENST00000563239 NABP2Q9BQ15 211 aa6.8□□□□□ -1.32
UBR1-204ENST00000563239 MRPL20Q9BYC9 149 aaKnown RBP6.8□□□□□ -1.32
UBR1-204ENST00000563239 PLSCR3Q9NRY6 295 aa6.8□□□□□ -1.32
UBR1-204ENST00000563239 BET1O15155 118 aa6.79□□□□□ -1.32
UBR1-204ENST00000563239 TXNL1O43396 289 aa6.79□□□□□ -1.32
UBR1-204ENST00000563239 XRCC3O43542 346 aa6.79□□□□□ -1.32
UBR1-204ENST00000563239 DIRAS3O95661 229 aa6.79□□□□□ -1.32
UBR1-204ENST00000563239 EIF4EP06730 217 aaKnown RBP6.79□□□□□ -1.32
UBR1-204ENST00000563239 CT45A6P0DMU7 189 aa6.79□□□□□ -1.32
UBR1-204ENST00000563239 CT45A5P0DMU8 189 aa6.79□□□□□ -1.32
UBR1-204ENST00000563239 CT45A7P0DMV0 189 aa6.79□□□□□ -1.32
UBR1-204ENST00000563239 TMEM11P17152 192 aa6.79□□□□□ -1.32
UBR1-204ENST00000563239 TALDO1P37837 337 aa6.79□□□□□ -1.32
UBR1-204ENST00000563239 RPL5P46777 297 aaKnown RBP6.79□□□□□ -1.32
UBR1-204ENST00000563239 LINC00205P59089 165 aa6.79□□□□□ -1.32
UBR1-204ENST00000563239 MRPS15P82914 257 aaKnown RBP6.79□□□□□ -1.32
UBR1-204ENST00000563239 LSAMPQ13449 338 aa6.79□□□□□ -1.32
UBR1-204ENST00000563239 KIR2DS1Q14954 304 aa6.79□□□□□ -1.32
UBR1-204ENST00000563239 TMEM95Q3KNT9 176 aa6.79□□□□□ -1.32
UBR1-204ENST00000563239 UBE2NLQ5JXB2 153 aa6.79□□□□□ -1.32
UBR1-204ENST00000563239 HIST2H2BDQ6DRA6 164 aa6.79□□□□□ -1.32
UBR1-204ENST00000563239 C11orf88Q6PI97 169 aa6.79□□□□□ -1.32
UBR1-204ENST00000563239 GVQW1Q8N7I0 195 aa6.79□□□□□ -1.32
UBR1-204ENST00000563239 C5orf56Q8N8D9 126 aa6.79□□□□□ -1.32
UBR1-204ENST00000563239 SAMD12Q8N8I0 201 aa6.79□□□□□ -1.32
UBR1-204ENST00000563239 OR2T6Q8NHC8 308 aa6.79□□□□□ -1.32
UBR1-204ENST00000563239 C5orf30Q96GV9 206 aa6.79□□□□□ -1.32
UBR1-204ENST00000563239 ST6GALNAC5Q9BVH7 336 aa6.79□□□□□ -1.32
UBR1-204ENST00000563239 PRSS22Q9GZN4 317 aa6.79□□□□□ -1.32
UBR1-204ENST00000563239 WNT10AQ9GZT5 417 aa6.79□□□□□ -1.32
UBR1-204ENST00000563239 DCSTAMPQ9H295 470 aa6.79□□□□□ -1.32
UBR1-204ENST00000563239 RDH8Q9NYR8 311 aa6.79□□□□□ -1.32
UBR1-204ENST00000563239 RNF150Q9ULK6 438 aa6.79□□□□□ -1.32
UBR1-204ENST00000563239 RAB29O14966 203 aa6.78□□□□□ -1.32
UBR1-204ENST00000563239 HSPA12AO43301 675 aa6.78□□□□□ -1.32
UBR1-204ENST00000563239 MOSP00540 346 aa6.78□□□□□ -1.32
UBR1-204ENST00000563239 HLA-DQB1P01920 261 aa6.78□□□□□ -1.32
UBR1-204ENST00000563239 ELK1P19419 428 aa6.78□□□□□ -1.32
UBR1-204ENST00000563239 RORCP51449 518 aa6.78□□□□□ -1.32
UBR1-204ENST00000563239 F2RL1P55085 397 aa6.78□□□□□ -1.32
UBR1-204ENST00000563239 GNG2P59768 71 aa6.78□□□□□ -1.32
UBR1-204ENST00000563239 PITPNAQ00169 270 aa6.78□□□□□ -1.32
UBR1-204ENST00000563239 HES1Q14469 280 aa6.78□□□□□ -1.32
UBR1-204ENST00000563239 ABCA11PQ4W5N1 156 aa6.78□□□□□ -1.32
UBR1-204ENST00000563239 FAM71F2Q6NXP2 309 aa6.78□□□□□ -1.32
UBR1-204ENST00000563239 HOGA1Q86XE5 327 aa6.78□□□□□ -1.32
UBR1-204ENST00000563239 CLVS1Q8IUQ0 354 aaPredicted RBP6.78□□□□□ -1.32
UBR1-204ENST00000563239 H1FOOQ8IZA3 346 aaPredicted RBP6.78□□□□□ -1.32
UBR1-204ENST00000563239 KLHDC1Q8N7A1 406 aa6.78□□□□□ -1.32
UBR1-204ENST00000563239 Q8N9W7 124 aa6.78□□□□□ -1.32
UBR1-204ENST00000563239 OR2T10Q8NGZ9 312 aa6.78□□□□□ -1.32
UBR1-204ENST00000563239 OR10J5Q8NHC4 309 aa6.78□□□□□ -1.32
UBR1-204ENST00000563239 EDARADDQ8WWZ3 215 aa6.78□□□□□ -1.32
UBR1-204ENST00000563239 S100A16Q96FQ6 103 aaKnown RBP6.78□□□□□ -1.32
UBR1-204ENST00000563239 CMTM3Q96MX0 182 aa6.78□□□□□ -1.32
UBR1-204ENST00000563239 DIABLOQ9NR28 239 aa6.78□□□□□ -1.32
UBR1-204ENST00000563239 PIPOXQ9P0Z9 390 aa6.78□□□□□ -1.32
UBR1-204ENST00000563239 COMMD3Q9UBI1 195 aa6.78□□□□□ -1.32
UBR1-204ENST00000563239 ANXA10Q9UJ72 324 aa6.78□□□□□ -1.32
UBR1-204ENST00000563239 GAB2Q9UQC2 676 aa6.78□□□□□ -1.32
UBR1-204ENST00000563239 MOB4Q9Y3A3 225 aa6.78□□□□□ -1.32
UBR1-204ENST00000563239 LINC01548A6NM66 108 aa6.77□□□□□ -1.33
UBR1-204ENST00000563239 M0QZK8 103 aa6.77□□□□□ -1.33
UBR1-204ENST00000563239 FGF16O43320 207 aa6.77□□□□□ -1.33
UBR1-204ENST00000563239 HPGDSO60760 199 aa6.77□□□□□ -1.33
UBR1-204ENST00000563239 APOA1P02647 267 aa6.77□□□□□ -1.33
UBR1-204ENST00000563239 OR8U9P0C7N5 309 aa6.77□□□□□ -1.33
UBR1-204ENST00000563239 ZNF182P17025 639 aaPredicted RBP6.77□□□□□ -1.33
UBR1-204ENST00000563239 CNTFRP26992 372 aa6.77□□□□□ -1.33
UBR1-204ENST00000563239 TMBIM6P55061 237 aa6.77□□□□□ -1.33
UBR1-204ENST00000563239 TAS2R20P59543 309 aa6.77□□□□□ -1.33
UBR1-204ENST00000563239 CNIH2Q6PI25 160 aa6.77□□□□□ -1.33
UBR1-204ENST00000563239 GLDNQ6ZMI3 551 aaPredicted RBP6.77□□□□□ -1.33
UBR1-204ENST00000563239 FAM71E2Q8N5Q1 922 aa6.77□□□□□ -1.33
UBR1-204ENST00000563239 ZNF383Q8NA42 475 aa6.77□□□□□ -1.33
UBR1-204ENST00000563239 OR5AN1Q8NGI8 311 aa6.77□□□□□ -1.33
UBR1-204ENST00000563239 OR8U1Q8NH10 309 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms