RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 RAB9BQ9NP90 201 aa17.82■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 LAMP3Q9UQV4 416 aa17.82■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 ZNF835Q9Y2P0 537 aa17.82■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 FAM96BQ9Y3D0 163 aa17.82■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 ARID1AO14497 2285 aa17.82■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 SIGLEC5O15389 551 aa17.81■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 TNFAIP6P98066 277 aaPredicted RBP17.81■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 MIDNQ504T8 468 aa17.81■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 TMEM217Q8N7C4 229 aa17.81■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 LFNGQ8NES3 379 aa17.81■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 TCTEX1D2Q8WW35 142 aa17.81■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 RNF7Q9UBF6 113 aa17.81■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 JPT1Q9UK76 154 aa17.81■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 IGHV3OR15-7A0A075B7D8 119 aa17.81■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 K7N7A8 449 aa17.81■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 AGPAT2O15120 278 aa17.81■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 SNAPINO95295 136 aa17.81■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 CLDN1O95832 211 aa17.81■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 CCKARP32238 428 aa17.81■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 SNCAP37840 140 aa17.81■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 ARHGDIBP52566 201 aa17.81■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 PEA15Q15121 130 aa17.81■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 IZUMO4Q1ZYL8 232 aa17.81■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 FAM222BQ8WU58 562 aa17.81■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 PSENENQ9NZ42 101 aa17.81■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 DMXL1Q9Y485 3027 aa17.81■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 RIF1Q5UIP0 2472 aaKnown RBP17.8■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 TSPAN4O14817 238 aa17.8■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 IFNA5P01569 189 aa17.8■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 ID4P47928 161 aa17.8■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 RFESDQ8TAC1 157 aa17.8■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 C5orf30Q96GV9 206 aa17.8■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 OR6C3Q9NZP0 311 aa17.8■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 IGHV1-46P01743 117 aa17.79■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 CD80P33681 288 aa17.79■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 RPL30P62888 115 aaKnown RBP17.79■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 RBPJQ06330 500 aa17.79■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 ZNF295-AS1Q8N0V1 137 aa17.79■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 PUSL1Q8N0Z8 303 aaKnown RBP17.79■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 ZNF561Q8N587 486 aa17.79■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 FAM213BQ8TBF2 198 aa17.79■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 C14orf79Q96F83 325 aa17.79■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 PSG11Q9UQ72 335 aa17.79■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 HEATR1Q9H583 2144 aaKnown RBP17.79■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 DNASE2O00115 360 aaPredicted RBP17.79■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 SFTA3P0C7M3 94 aa17.79■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 GUCA2BQ16661 112 aa17.79■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 SPRNQ5BIV9 151 aa17.79■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 Q8TCH9 128 aa17.79■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 CD300LFQ8TDQ1 290 aa17.79■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 DCTN5Q9BTE1 182 aa17.79■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 PBDC1Q9BVG4 233 aa17.79■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 ESRP2Q9H6T0 727 aaKnown RBP17.79■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 JKAMPQ9P055 326 aa17.79■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 GNG12Q9UBI6 72 aa17.79■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 IGHV3-43A0A0B4J1X8 118 aa17.78■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 YPEL1O60688 119 aa17.78■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 RAMP3O60896 148 aa17.78■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 CLDN14O95500 239 aa17.78■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 IGHV3-43DP0DP04 118 aa17.78■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 HBG1P69891 147 aa17.78■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 HBG2P69892 147 aa17.78■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 DPPA3Q6W0C5 159 aa17.78■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 YPEL2Q96QA6 119 aa17.78■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 DIRC2Q96SL1 478 aa17.78■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 GCM1Q9NP62 436 aa17.78■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 CHD3Q12873 2000 aaKnown RBP17.77■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 H3BP45 60 aa17.77■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 F2RL2O00254 374 aa17.77■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 ST8SIA5O15466 376 aa17.77■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 P0C879 139 aa17.77■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 IAPPP10997 89 aa17.77■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 GPR12P47775 334 aa17.77■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 TMEM267Q0VDI3 215 aaPredicted RBP17.77■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 ZNF816Q0VGE8 651 aaPredicted RBP17.77■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 FAM53AQ6NSI3 398 aaPredicted RBP17.77■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 C22orf34Q6ZV56 151 aa17.77■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 WFDC8Q8IUA0 241 aa17.77■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 SDSLQ96GA7 329 aa17.77■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 KCNJ16Q9NPI9 418 aa17.77■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.77■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 SVILO95425 2214 aa17.77■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 GVINP1Q7Z2Y8 2422 aa17.77■□□□□ 0.44
VPS9D1-AS1-202ENST00000562866 BTBD17A6NE02 478 aa17.76■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 C17orf98A8MV24 154 aa17.76■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 RAB29O14966 203 aa17.76■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 IRF2P14316 349 aa17.76■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 FHITP49789 147 aa17.76■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 UBE2KP61086 200 aa17.76■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 GUK1Q16774 197 aa17.76■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 Q3ZCU0 254 aa17.76■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 MORN2Q502X0 79 aa17.76■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 OR2B11Q5JQS5 317 aa17.76■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 SLC25A24Q6NUK1 477 aa17.76■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 BTNL3Q6UXE8 466 aa17.76■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 AGMATQ9BSE5 352 aa17.76■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 HSPB7Q9UBY9 170 aa17.76■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 KPTNQ9Y664 436 aa17.76■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 DEFB108AA8MXU0 73 aa17.76■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 C1QL1O75973 258 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms