RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 CDS2O95674 445 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 KITLGP21583 273 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 EFNB2P52799 333 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 ADIRFQ15847 76 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 OR8G2PQ6IF36 304 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 BTNL3Q6UXE8 466 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 C1orf122Q6ZSJ8 110 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 OR4S2Q8NH73 311 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 MBD3L2Q8NHZ7 208 aaPredicted RBP6.48□□□□□ -1.37
TCF4-216ENST00000562680 RNF138Q8WVD3 245 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 OR5P3Q8WZ94 311 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 AQP3Q92482 292 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 RGP1Q92546 391 aaPredicted RBP6.48□□□□□ -1.37
TCF4-216ENST00000562680 PINX1Q96BK5 328 aaKnown RBP6.48□□□□□ -1.37
TCF4-216ENST00000562680 RBMXL1Q96E39 390 aaKnown RBP6.48□□□□□ -1.37
TCF4-216ENST00000562680 OR2V2Q96R30 315 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 CISD1Q9NZ45 108 aaKnown RBP6.48□□□□□ -1.37
TCF4-216ENST00000562680 OR2W1Q9Y3N9 320 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 MUC6Q6W4X9 2439 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 XKRY2A2RUG3 117 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 A8MXK9 166 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 PLA2G10O15496 165 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 RPS16P62249 146 aaKnown RBP6.48□□□□□ -1.37
TCF4-216ENST00000562680 PPP1R1AQ13522 171 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 C4orf17Q53FE4 359 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 UNQ6494/PRO21346Q6UXR6 183 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 LDLRAD3Q86YD5 345 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 HSD17B10Q99714 261 aaKnown RBP6.48□□□□□ -1.37
TCF4-216ENST00000562680 SH2D2AQ9NP31 389 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 CLCF1Q9UBD9 225 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 C3orf85A0A1B0GTC6 90 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 RNASEK-C17orf49H0YIS7 233 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 FCGR3AP08637 254 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 IGFBP3P17936 291 aaPredicted RBP6.48□□□□□ -1.37
TCF4-216ENST00000562680 CD40P25942 277 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 SLAQ13239 276 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 UBE2V2Q15819 145 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 PIGYQ3MUY2 71 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 LGALSLQ3ZCW2 172 aaPredicted RBP6.48□□□□□ -1.37
TCF4-216ENST00000562680 DNLZQ5SXM8 178 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 PUSL1Q8N0Z8 303 aaKnown RBP6.48□□□□□ -1.37
TCF4-216ENST00000562680 MITD1Q8WV92 249 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 TM2D1Q9BX74 207 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 FAM234AQ9H0X4 552 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 PATZ1Q9HBE1 687 aaKnown RBP6.48□□□□□ -1.37
TCF4-216ENST00000562680 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.48□□□□□ -1.37
TCF4-216ENST00000562680 CBLN4Q9NTU7 201 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 SNRNP200O75643 2136 aaKnown RBP6.48□□□□□ -1.37
TCF4-216ENST00000562680 C7orf66A4D0T2 115 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 IQCF6A8MYZ5 107 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 OR4A8P0C604 315 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 RPS11P62280 158 aaKnown RBP eCLIP6.48□□□□□ -1.37
TCF4-216ENST00000562680 GUCA2BQ16661 112 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 HIST3H3Q16695 136 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 FAM169BQ8N8A8 192 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 OR5R1Q8NH85 324 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 RPEQ96AT9 228 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 NEU1Q99519 415 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 NIPSNAP3BQ9BS92 247 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 PITPNC1Q9UKF7 332 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 DNAJC13O75165 2243 aa6.48□□□□□ -1.37
TCF4-216ENST00000562680 IGHV2OR16-5A0A0B4J2B6 119 aa6.47□□□□□ -1.37
TCF4-216ENST00000562680 FBXO24O75426 580 aa6.47□□□□□ -1.37
TCF4-216ENST00000562680 CRYGSP22914 178 aa6.47□□□□□ -1.37
TCF4-216ENST00000562680 RPL12P30050 165 aaKnown RBP6.47□□□□□ -1.37
TCF4-216ENST00000562680 PRSS12P56730 875 aa6.47□□□□□ -1.37
TCF4-216ENST00000562680 BRICD5Q6PL45 260 aa6.47□□□□□ -1.37
TCF4-216ENST00000562680 MRPL52Q86TS9 123 aaKnown RBP6.47□□□□□ -1.37
TCF4-216ENST00000562680 TEX29Q8N6K0 151 aa6.47□□□□□ -1.37
TCF4-216ENST00000562680 GVQW1Q8N7I0 195 aa6.47□□□□□ -1.37
TCF4-216ENST00000562680 OR10P1Q8NGE3 313 aa6.47□□□□□ -1.37
TCF4-216ENST00000562680 PPP1R1CQ8WVI7 109 aa6.47□□□□□ -1.37
TCF4-216ENST00000562680 ITLN1Q8WWA0 313 aa6.47□□□□□ -1.37
TCF4-216ENST00000562680 NEIL1Q96FI4 390 aaPredicted RBP6.47□□□□□ -1.37
TCF4-216ENST00000562680 KCNK15Q9H427 330 aa6.47□□□□□ -1.37
TCF4-216ENST00000562680 BARX1Q9HBU1 254 aaPredicted RBP6.47□□□□□ -1.37
TCF4-216ENST00000562680 PIPOXQ9P0Z9 390 aa6.47□□□□□ -1.37
TCF4-216ENST00000562680 PSG11Q9UQ72 335 aa6.47□□□□□ -1.37
TCF4-216ENST00000562680 URGCP-MRPS24S4R325 110 aa6.47□□□□□ -1.37
TCF4-216ENST00000562680 KIAA1324LA8MWY0 1029 aaPredicted RBP6.47□□□□□ -1.37
TCF4-216ENST00000562680 MUC1P15941 1255 aaPredicted RBP6.47□□□□□ -1.37
TCF4-216ENST00000562680 VDAC1P21796 283 aa6.47□□□□□ -1.37
TCF4-216ENST00000562680 APOBEC3AP31941 199 aaPredicted RBP6.47□□□□□ -1.37
TCF4-216ENST00000562680 CD80P33681 288 aa6.47□□□□□ -1.37
TCF4-216ENST00000562680 GPR6P46095 362 aaPredicted RBP6.47□□□□□ -1.37
TCF4-216ENST00000562680 ERVFC1-1P60608 527 aa6.47□□□□□ -1.37
TCF4-216ENST00000562680 RPL24P83731 157 aaKnown RBP6.47□□□□□ -1.37
TCF4-216ENST00000562680 Q5BKY6 102 aa6.47□□□□□ -1.37
TCF4-216ENST00000562680 MYPOPQ86VE0 399 aaPredicted RBP6.47□□□□□ -1.37
TCF4-216ENST00000562680 FAM219AQ8IW50 185 aa6.47□□□□□ -1.37
TCF4-216ENST00000562680 TMEM56Q96MV1 263 aa6.47□□□□□ -1.37
TCF4-216ENST00000562680 CLN8Q9UBY8 286 aa6.47□□□□□ -1.37
TCF4-216ENST00000562680 KIF26BQ2KJY2 2108 aa6.47□□□□□ -1.37
TCF4-216ENST00000562680 DVL1O14640 695 aa6.47□□□□□ -1.37
TCF4-216ENST00000562680 TMPRSS2O15393 492 aa6.47□□□□□ -1.37
TCF4-216ENST00000562680 TNFSF12O43508 249 aa6.47□□□□□ -1.37
TCF4-216ENST00000562680 OR5AC1P0C628 307 aa6.47□□□□□ -1.37
TCF4-216ENST00000562680 COX6B1P14854 86 aa6.47□□□□□ -1.37
TCF4-216ENST00000562680 PLP1P60201 277 aa6.47□□□□□ -1.37
TCF4-216ENST00000562680 CKS1BP61024 79 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms