RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 OR10K2Q6IF99 312 aa8.89□□□□□ -0.99
NSMCE1-202ENST00000561960 IL34Q6ZMJ4 242 aa8.89□□□□□ -0.99
NSMCE1-202ENST00000561960 LINC00596Q86U02 117 aa8.89□□□□□ -0.99
NSMCE1-202ENST00000561960 DEFB125Q8N687 156 aa8.89□□□□□ -0.99
NSMCE1-202ENST00000561960 OR2AK2Q8NG84 335 aa8.89□□□□□ -0.99
NSMCE1-202ENST00000561960 FLYWCH2Q96CP2 140 aaKnown RBP8.89□□□□□ -0.99
NSMCE1-202ENST00000561960 MRPL48Q96GC5 212 aaKnown RBP8.89□□□□□ -0.99
NSMCE1-202ENST00000561960 CENPNQ96H22 339 aaPredicted RBP8.89□□□□□ -0.99
NSMCE1-202ENST00000561960 RHOVQ96L33 236 aa8.89□□□□□ -0.99
NSMCE1-202ENST00000561960 HIPK2Q9H2X6 1198 aa8.89□□□□□ -0.99
NSMCE1-202ENST00000561960 KCNIP1Q9NZI2 227 aa8.89□□□□□ -0.99
NSMCE1-202ENST00000561960 RNF150Q9ULK6 438 aa8.89□□□□□ -0.99
NSMCE1-202ENST00000561960 ERGIC3Q9Y282 383 aa8.89□□□□□ -0.99
NSMCE1-202ENST00000561960 ORC6Q9Y5N6 252 aa8.89□□□□□ -0.99
NSMCE1-202ENST00000561960 C13orf42A0A1B0GVH6 325 aa8.88□□□□□ -0.99
NSMCE1-202ENST00000561960 DYNC1I1O14576 645 aa8.88□□□□□ -0.99
NSMCE1-202ENST00000561960 ARPC1BO15143 372 aaKnown RBP8.88□□□□□ -0.99
NSMCE1-202ENST00000561960 RBMXL2O75526 392 aaKnown RBP8.88□□□□□ -0.99
NSMCE1-202ENST00000561960 RGS11O94810 467 aa8.88□□□□□ -0.99
NSMCE1-202ENST00000561960 FADS2O95864 444 aaKnown RBP8.88□□□□□ -0.99
NSMCE1-202ENST00000561960 MGMTP16455 207 aa8.88□□□□□ -0.99
NSMCE1-202ENST00000561960 CD81P60033 236 aa8.88□□□□□ -0.99
NSMCE1-202ENST00000561960 PJVKQ0ZLH3 352 aa8.88□□□□□ -0.99
NSMCE1-202ENST00000561960 MEDAGQ5VYS4 303 aa8.88□□□□□ -0.99
NSMCE1-202ENST00000561960 DMKNQ6E0U4 476 aaPredicted RBP8.88□□□□□ -0.99
NSMCE1-202ENST00000561960 GTSCR1Q86UQ5 136 aa8.88□□□□□ -0.99
NSMCE1-202ENST00000561960 OR9G4Q8NGQ1 327 aa8.88□□□□□ -0.99
NSMCE1-202ENST00000561960 APH1BQ8WW43 257 aa8.88□□□□□ -0.99
NSMCE1-202ENST00000561960 TRUB1Q8WWH5 349 aaKnown RBP8.88□□□□□ -0.99
NSMCE1-202ENST00000561960 OR14A2Q96R54 314 aa8.88□□□□□ -0.99
NSMCE1-202ENST00000561960 SULT4A1Q9BR01 284 aa8.88□□□□□ -0.99
NSMCE1-202ENST00000561960 OR1A1Q9P1Q5 309 aa8.88□□□□□ -0.99
NSMCE1-202ENST00000561960 CLEC2DQ9UHP7 191 aa8.88□□□□□ -0.99
NSMCE1-202ENST00000561960 CEPT1Q9Y6K0 416 aa8.88□□□□□ -0.99
NSMCE1-202ENST00000561960 H0YJW9 148 aa8.87□□□□□ -0.99
NSMCE1-202ENST00000561960 H3BNX3 289 aa8.87□□□□□ -0.99
NSMCE1-202ENST00000561960 ATP8B1O43520 1251 aa8.87□□□□□ -0.99
NSMCE1-202ENST00000561960 SLC25A17O43808 307 aa8.87□□□□□ -0.99
NSMCE1-202ENST00000561960 IGKV1-16P04430 117 aa8.87□□□□□ -0.99
NSMCE1-202ENST00000561960 CSN3P07498 182 aa8.87□□□□□ -0.99
NSMCE1-202ENST00000561960 CD7P09564 240 aa8.87□□□□□ -0.99
NSMCE1-202ENST00000561960 IGFBP3P17936 291 aaPredicted RBP8.87□□□□□ -0.99
NSMCE1-202ENST00000561960 PSG5Q15238 335 aa8.87□□□□□ -0.99
NSMCE1-202ENST00000561960 Q3ZCU0 254 aa8.87□□□□□ -0.99
NSMCE1-202ENST00000561960 SLC25A30Q5SVS4 291 aa8.87□□□□□ -0.99
NSMCE1-202ENST00000561960 ZNF660Q6AZW8 331 aaPredicted RBP8.87□□□□□ -0.99
NSMCE1-202ENST00000561960 C6orf201Q7Z4U5 140 aa8.87□□□□□ -0.99
NSMCE1-202ENST00000561960 CBR4Q8N4T8 237 aa8.87□□□□□ -0.99
NSMCE1-202ENST00000561960 HDHD3Q9BSH5 251 aaPredicted RBP8.87□□□□□ -0.99
NSMCE1-202ENST00000561960 THAP7Q9BT49 309 aaPredicted RBP8.87□□□□□ -0.99
NSMCE1-202ENST00000561960 FAAP24Q9BTP7 215 aa8.87□□□□□ -0.99
NSMCE1-202ENST00000561960 PAK1IP1Q9NWT1 392 aaPredicted RBP8.87□□□□□ -0.99
NSMCE1-202ENST00000561960 JPT1Q9UK76 154 aa8.87□□□□□ -0.99
NSMCE1-202ENST00000561960 A8MZ25 164 aa8.86□□□□□ -0.99
NSMCE1-202ENST00000561960 PRH1P02810 166 aa8.86□□□□□ -0.99
NSMCE1-202ENST00000561960 FCGR1AP12314 374 aa8.86□□□□□ -0.99
NSMCE1-202ENST00000561960 CRIP2P52943 208 aaPredicted RBP8.86□□□□□ -0.99
NSMCE1-202ENST00000561960 RPS16P62249 146 aaKnown RBP8.86□□□□□ -0.99
NSMCE1-202ENST00000561960 SSBP2P81877 361 aaPredicted RBP8.86□□□□□ -0.99
NSMCE1-202ENST00000561960 TMEM267Q0VDI3 215 aaPredicted RBP8.86□□□□□ -0.99
NSMCE1-202ENST00000561960 RAB40BQ12829 278 aa8.86□□□□□ -0.99
NSMCE1-202ENST00000561960 FXYD3Q14802 87 aa8.86□□□□□ -0.99
NSMCE1-202ENST00000561960 GHSRQ92847 366 aa8.86□□□□□ -0.99
NSMCE1-202ENST00000561960 Q96M66 194 aa8.86□□□□□ -0.99
NSMCE1-202ENST00000561960 NICN1Q9BSH3 213 aa8.86□□□□□ -0.99
NSMCE1-202ENST00000561960 CHMP1AQ9HD42 196 aaPredicted RBP8.86□□□□□ -0.99
NSMCE1-202ENST00000561960 MBNL3Q9NUK0 354 aaKnown RBP8.86□□□□□ -0.99
NSMCE1-202ENST00000561960 NKX1-2Q9UD57 310 aaPredicted RBP8.86□□□□□ -0.99
NSMCE1-202ENST00000561960 KIAA1109Q2LD37 5005 aa8.85□□□□□ -0.99
NSMCE1-202ENST00000561960 SNTNA6NMZ2 147 aa8.85□□□□□ -0.99
NSMCE1-202ENST00000561960 YPEL1O60688 119 aa8.85□□□□□ -0.99
NSMCE1-202ENST00000561960 PDCD6O75340 191 aa8.85□□□□□ -0.99
NSMCE1-202ENST00000561960 CNIH1O95406 144 aa8.85□□□□□ -0.99
NSMCE1-202ENST00000561960 FUT3P21217 361 aa8.85□□□□□ -0.99
NSMCE1-202ENST00000561960 ALDH3A2P51648 485 aa8.85□□□□□ -0.99
NSMCE1-202ENST00000561960 RPS11P62280 158 aaKnown RBP eCLIP8.85□□□□□ -0.99
NSMCE1-202ENST00000561960 EWSR1Q01844 656 aaKnown RBP eCLIP8.85□□□□□ -0.99
NSMCE1-202ENST00000561960 TAGLNQ01995 201 aaKnown RBP8.85□□□□□ -0.99
NSMCE1-202ENST00000561960 KLF5Q13887 457 aaPredicted RBP8.85□□□□□ -0.99
NSMCE1-202ENST00000561960 INSL4Q14641 139 aa8.85□□□□□ -0.99
NSMCE1-202ENST00000561960 RNLSQ5VYX0 342 aa8.85□□□□□ -0.99
NSMCE1-202ENST00000561960 RPL22L1Q6P5R6 122 aaKnown RBP8.85□□□□□ -0.99
NSMCE1-202ENST00000561960 TRAT1Q6PIZ9 186 aa8.85□□□□□ -0.99
NSMCE1-202ENST00000561960 CD200R1LQ6Q8B3 271 aa8.85□□□□□ -0.99
NSMCE1-202ENST00000561960 GAPTQ8N292 157 aa8.85□□□□□ -0.99
NSMCE1-202ENST00000561960 RPP25LQ8N5L8 163 aaKnown RBP8.85□□□□□ -0.99
NSMCE1-202ENST00000561960 POC5Q8NA72 575 aa8.85□□□□□ -0.99
NSMCE1-202ENST00000561960 LINC00476Q8WZB0 136 aa8.85□□□□□ -0.99
NSMCE1-202ENST00000561960 GALMQ96C23 342 aa8.85□□□□□ -0.99
NSMCE1-202ENST00000561960 YPEL2Q96QA6 119 aa8.85□□□□□ -0.99
NSMCE1-202ENST00000561960 NEURL2Q9BR09 285 aa8.85□□□□□ -0.99
NSMCE1-202ENST00000561960 SRD5A3Q9H8P0 318 aa8.85□□□□□ -0.99
NSMCE1-202ENST00000561960 SPACA1Q9HBV2 294 aa8.85□□□□□ -0.99
NSMCE1-202ENST00000561960 RANGRFQ9HD47 186 aaPredicted RBP8.85□□□□□ -0.99
NSMCE1-202ENST00000561960 RAB9BQ9NP90 201 aa8.85□□□□□ -0.99
NSMCE1-202ENST00000561960 COA4Q9NYJ1 87 aa8.85□□□□□ -0.99
NSMCE1-202ENST00000561960 SLC23A1Q9UHI7 598 aa8.85□□□□□ -0.99
NSMCE1-202ENST00000561960 WASHC3Q9Y3C0 194 aa8.85□□□□□ -0.99
NSMCE1-202ENST00000561960 TRBV5-5A0A0J9YX44 114 aa8.84□□□□□ -0.99
NSMCE1-202ENST00000561960 H0Y980 276 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms