RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 CFHR3Q02985 330 aa13.49□□□□□ -0.25
CDC42BPB-208ENST00000561271 PNLIPRP3Q17RR3 467 aa13.49□□□□□ -0.25
CDC42BPB-208ENST00000561271 DEFB136Q30KP8 78 aa13.49□□□□□ -0.25
CDC42BPB-208ENST00000561271 CXorf66Q5JRM2 361 aaPredicted RBP13.49□□□□□ -0.25
CDC42BPB-208ENST00000561271 PLAC9Q5JTB6 97 aa13.49□□□□□ -0.25
CDC42BPB-208ENST00000561271 ABHD14BQ96IU4 210 aa13.49□□□□□ -0.25
CDC42BPB-208ENST00000561271 ZNF251Q9BRH9 671 aa13.49□□□□□ -0.25
CDC42BPB-208ENST00000561271 GON7Q9BXV9 100 aa13.49□□□□□ -0.25
CDC42BPB-208ENST00000561271 RIMS4Q9H426 269 aaPredicted RBP13.49□□□□□ -0.25
CDC42BPB-208ENST00000561271 NDUFB11Q9NX14 153 aa13.49□□□□□ -0.25
CDC42BPB-208ENST00000561271 HSF4Q9ULV5 492 aa13.49□□□□□ -0.25
CDC42BPB-208ENST00000561271 TNCP24821 2201 aa13.49□□□□□ -0.25
CDC42BPB-208ENST00000561271 LDLRAD4O15165 306 aa13.48□□□□□ -0.25
CDC42BPB-208ENST00000561271 NBR2O15453 112 aa13.48□□□□□ -0.25
CDC42BPB-208ENST00000561271 DUS4LO95620 317 aaKnown RBP13.48□□□□□ -0.25
CDC42BPB-208ENST00000561271 FOXE3Q13461 319 aa13.48□□□□□ -0.25
CDC42BPB-208ENST00000561271 C2orf76Q3KRA6 126 aa13.48□□□□□ -0.25
CDC42BPB-208ENST00000561271 FAM71F2Q6NXP2 309 aa13.48□□□□□ -0.25
CDC42BPB-208ENST00000561271 GLDNQ6ZMI3 551 aaPredicted RBP13.48□□□□□ -0.25
CDC42BPB-208ENST00000561271 OR56B1Q8NGI3 324 aa13.48□□□□□ -0.25
CDC42BPB-208ENST00000561271 RAX2Q96IS3 184 aa13.48□□□□□ -0.25
CDC42BPB-208ENST00000561271 P2RX4Q99571 388 aa13.48□□□□□ -0.25
CDC42BPB-208ENST00000561271 Q9N2K0 584 aa13.48□□□□□ -0.25
CDC42BPB-208ENST00000561271 PIPOXQ9P0Z9 390 aa13.48□□□□□ -0.25
CDC42BPB-208ENST00000561271 SORL1Q92673 2214 aa13.48□□□□□ -0.25
CDC42BPB-208ENST00000561271 ATP6V0E1O15342 81 aa13.47□□□□□ -0.25
CDC42BPB-208ENST00000561271 HSPA12AO43301 675 aa13.47□□□□□ -0.25
CDC42BPB-208ENST00000561271 DENRO43583 198 aaKnown RBP13.47□□□□□ -0.25
CDC42BPB-208ENST00000561271 SCTP09683 121 aa13.47□□□□□ -0.25
CDC42BPB-208ENST00000561271 MYL9P24844 172 aa13.47□□□□□ -0.25
CDC42BPB-208ENST00000561271 SLC6A1P30531 599 aa13.47□□□□□ -0.25
CDC42BPB-208ENST00000561271 RAB25P57735 213 aa13.47□□□□□ -0.25
CDC42BPB-208ENST00000561271 KRTAP10-11P60412 298 aa13.47□□□□□ -0.25
CDC42BPB-208ENST00000561271 GABARAPL2P60520 117 aa13.47□□□□□ -0.25
CDC42BPB-208ENST00000561271 MOGAT2Q3SYC2 334 aa13.47□□□□□ -0.25
CDC42BPB-208ENST00000561271 KCTD7Q96MP8 289 aa13.47□□□□□ -0.25
CDC42BPB-208ENST00000561271 CMSS1Q9BQ75 279 aaKnown RBP13.47□□□□□ -0.25
CDC42BPB-208ENST00000561271 PARP11Q9NR21 331 aa13.47□□□□□ -0.25
CDC42BPB-208ENST00000561271 COL7A1Q02388 2944 aa13.47□□□□□ -0.25
CDC42BPB-208ENST00000561271 A0A0B4J203 849 aa13.46□□□□□ -0.25
CDC42BPB-208ENST00000561271 RAB29O14966 203 aa13.46□□□□□ -0.25
CDC42BPB-208ENST00000561271 IGHG4P01861 327 aa13.46□□□□□ -0.25
CDC42BPB-208ENST00000561271 HLA-DRB1P01911 266 aa13.46□□□□□ -0.25
CDC42BPB-208ENST00000561271 IGF1P05019 195 aa13.46□□□□□ -0.25
CDC42BPB-208ENST00000561271 ELANEP08246 267 aa13.46□□□□□ -0.25
CDC42BPB-208ENST00000561271 MYCNOSP40205 109 aa13.46□□□□□ -0.25
CDC42BPB-208ENST00000561271 C5orf64Q2M2E5 130 aa13.46□□□□□ -0.25
CDC42BPB-208ENST00000561271 RNF152Q8N8N0 203 aa13.46□□□□□ -0.25
CDC42BPB-208ENST00000561271 C11orf54Q9H0W9 315 aaPredicted RBP13.46□□□□□ -0.25
CDC42BPB-208ENST00000561271 ZNF580Q9UK33 172 aa13.46□□□□□ -0.25
CDC42BPB-208ENST00000561271 MGAT4AQ9UM21 535 aa13.46□□□□□ -0.25
CDC42BPB-208ENST00000561271 WSB1Q9Y6I7 421 aa13.46□□□□□ -0.25
CDC42BPB-208ENST00000561271 IGHV7-81A0A0B4J1V7 117 aa13.45□□□□□ -0.26
CDC42BPB-208ENST00000561271 TRAV1-2A0A0B4J238 106 aa13.45□□□□□ -0.26
CDC42BPB-208ENST00000561271 IGKV1-6A0A0C4DH72 117 aa13.45□□□□□ -0.26
CDC42BPB-208ENST00000561271 SMIM30A4D0T7 59 aa13.45□□□□□ -0.26
CDC42BPB-208ENST00000561271 OR5H14A6NHG9 310 aa13.45□□□□□ -0.26
CDC42BPB-208ENST00000561271 G3V318 75 aa13.45□□□□□ -0.26
CDC42BPB-208ENST00000561271 K7EIL1 84 aa13.45□□□□□ -0.26
CDC42BPB-208ENST00000561271 CCL24O00175 119 aa13.45□□□□□ -0.26
CDC42BPB-208ENST00000561271 ITGB1BP1O14713 200 aa13.45□□□□□ -0.26
CDC42BPB-208ENST00000561271 PDCD5O14737 125 aa13.45□□□□□ -0.26
CDC42BPB-208ENST00000561271 NDUFA3O95167 84 aa13.45□□□□□ -0.26
CDC42BPB-208ENST00000561271 CT45A6P0DMU7 189 aa13.45□□□□□ -0.26
CDC42BPB-208ENST00000561271 CT45A5P0DMU8 189 aa13.45□□□□□ -0.26
CDC42BPB-208ENST00000561271 CT45A7P0DMV0 189 aa13.45□□□□□ -0.26
CDC42BPB-208ENST00000561271 ZBTB25P24278 435 aa13.45□□□□□ -0.26
CDC42BPB-208ENST00000561271 CEACAM6P40199 344 aa13.45□□□□□ -0.26
CDC42BPB-208ENST00000561271 PSMD7P51665 324 aa13.45□□□□□ -0.26
CDC42BPB-208ENST00000561271 NDPQ00604 133 aa13.45□□□□□ -0.26
CDC42BPB-208ENST00000561271 C22orf42Q6IC83 251 aa13.45□□□□□ -0.26
CDC42BPB-208ENST00000561271 CD200R1LQ6Q8B3 271 aa13.45□□□□□ -0.26
CDC42BPB-208ENST00000561271 EDARADDQ8WWZ3 215 aa13.45□□□□□ -0.26
CDC42BPB-208ENST00000561271 DPF1Q92782 380 aa13.45□□□□□ -0.26
CDC42BPB-208ENST00000561271 AGMATQ9BSE5 352 aa13.45□□□□□ -0.26
CDC42BPB-208ENST00000561271 OR51J1Q9H342 316 aa13.45□□□□□ -0.26
CDC42BPB-208ENST00000561271 KIAA1456Q9P272 454 aa13.45□□□□□ -0.26
CDC42BPB-208ENST00000561271 RAB22AQ9UL26 194 aa13.45□□□□□ -0.26
CDC42BPB-208ENST00000561271 KCNK7Q9Y2U2 307 aa13.45□□□□□ -0.26
CDC42BPB-208ENST00000561271 A0A075B6Q4 140 aa13.44□□□□□ -0.26
CDC42BPB-208ENST00000561271 TRDV1A0A1B0GX56 115 aa13.44□□□□□ -0.26
CDC42BPB-208ENST00000561271 WI2-2373I1.2A0A1W2PRP0 233 aa13.44□□□□□ -0.26
CDC42BPB-208ENST00000561271 IFITM5A6NNB3 132 aa13.44□□□□□ -0.26
CDC42BPB-208ENST00000561271 H0YJW9 148 aa13.44□□□□□ -0.26
CDC42BPB-208ENST00000561271 H7C2Y5 167 aa13.44□□□□□ -0.26
CDC42BPB-208ENST00000561271 CD3GP09693 182 aa13.44□□□□□ -0.26
CDC42BPB-208ENST00000561271 OR5H8P0DN80 308 aa13.44□□□□□ -0.26
CDC42BPB-208ENST00000561271 PSMB8P28062 276 aa13.44□□□□□ -0.26
CDC42BPB-208ENST00000561271 EGFEM1PQ0D2K5 195 aa13.44□□□□□ -0.26
CDC42BPB-208ENST00000561271 NR2C2APQ86WQ0 139 aa13.44□□□□□ -0.26
CDC42BPB-208ENST00000561271 NPBQ8NG41 125 aa13.44□□□□□ -0.26
CDC42BPB-208ENST00000561271 OR8U1Q8NH10 309 aa13.44□□□□□ -0.26
CDC42BPB-208ENST00000561271 RAB3CQ96E17 227 aa13.44□□□□□ -0.26
CDC42BPB-208ENST00000561271 GPR61Q9BZJ8 451 aa13.44□□□□□ -0.26
CDC42BPB-208ENST00000561271 FBXL15Q9H469 300 aa13.44□□□□□ -0.26
CDC42BPB-208ENST00000561271 RNF150Q9ULK6 438 aa13.44□□□□□ -0.26
CDC42BPB-208ENST00000561271 WASHC3Q9Y3C0 194 aa13.44□□□□□ -0.26
CDC42BPB-208ENST00000561271 FCGR3AP08637 254 aa13.43□□□□□ -0.26
CDC42BPB-208ENST00000561271 RAB3BP20337 219 aa13.43□□□□□ -0.26
CDC42BPB-208ENST00000561271 PSMB9P28065 219 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms