RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 LSAMPQ13449 338 aa11.04□□□□□ -0.64
TPM1-230ENST00000561266 HES1Q14469 280 aa11.04□□□□□ -0.64
TPM1-230ENST00000561266 C11orf88Q6PI97 169 aa11.04□□□□□ -0.64
TPM1-230ENST00000561266 C10orf99Q6UWK7 81 aa11.04□□□□□ -0.64
TPM1-230ENST00000561266 C16orf82Q7Z2V1 217 aa11.04□□□□□ -0.64
TPM1-230ENST00000561266 TGIF2LXQ8IUE1 241 aa11.04□□□□□ -0.64
TPM1-230ENST00000561266 C5orf56Q8N8D9 126 aa11.04□□□□□ -0.64
TPM1-230ENST00000561266 OR4A4PQ8NGN8 299 aa11.04□□□□□ -0.64
TPM1-230ENST00000561266 OR2T6Q8NHC8 308 aa11.04□□□□□ -0.64
TPM1-230ENST00000561266 CABLES2Q9BTV7 478 aa11.04□□□□□ -0.64
TPM1-230ENST00000561266 WNT10AQ9GZT5 417 aa11.04□□□□□ -0.64
TPM1-230ENST00000561266 TOLLIPQ9H0E2 274 aa11.04□□□□□ -0.64
TPM1-230ENST00000561266 RDH8Q9NYR8 311 aa11.04□□□□□ -0.64
TPM1-230ENST00000561266 ETV7Q9Y603 341 aa11.04□□□□□ -0.64
TPM1-230ENST00000561266 TET2Q6N021 2002 aaPredicted RBP11.04□□□□□ -0.64
TPM1-230ENST00000561266 TRBV6-7A0A0A0MS04 114 aa11.03□□□□□ -0.64
TPM1-230ENST00000561266 BET1O15155 118 aa11.03□□□□□ -0.64
TPM1-230ENST00000561266 RGS11O94810 467 aa11.03□□□□□ -0.64
TPM1-230ENST00000561266 LPLP06858 475 aa11.03□□□□□ -0.64
TPM1-230ENST00000561266 GSTP1P09211 210 aaKnown RBP11.03□□□□□ -0.64
TPM1-230ENST00000561266 CT45A6P0DMU7 189 aa11.03□□□□□ -0.64
TPM1-230ENST00000561266 CT45A5P0DMU8 189 aa11.03□□□□□ -0.64
TPM1-230ENST00000561266 CT45A7P0DMV0 189 aa11.03□□□□□ -0.64
TPM1-230ENST00000561266 ZBTB25P24278 435 aa11.03□□□□□ -0.64
TPM1-230ENST00000561266 IL3RAP26951 378 aa11.03□□□□□ -0.64
TPM1-230ENST00000561266 CNTFRP26992 372 aa11.03□□□□□ -0.64
TPM1-230ENST00000561266 CD1BP29016 333 aa11.03□□□□□ -0.64
TPM1-230ENST00000561266 ARHGDIBP52566 201 aa11.03□□□□□ -0.64
TPM1-230ENST00000561266 SCAND1P57086 179 aa11.03□□□□□ -0.64
TPM1-230ENST00000561266 GLDNQ6ZMI3 551 aaPredicted RBP11.03□□□□□ -0.64
TPM1-230ENST00000561266 GVQW1Q8N7I0 195 aa11.03□□□□□ -0.64
TPM1-230ENST00000561266 Q8N9W7 124 aa11.03□□□□□ -0.64
TPM1-230ENST00000561266 OR2AK2Q8NG84 335 aa11.03□□□□□ -0.64
TPM1-230ENST00000561266 ST6GALNAC5Q9BVH7 336 aa11.03□□□□□ -0.64
TPM1-230ENST00000561266 ABCG5Q9H222 651 aa11.03□□□□□ -0.64
TPM1-230ENST00000561266 MGAT4AQ9UM21 535 aa11.03□□□□□ -0.64
TPM1-230ENST00000561266 MOB4Q9Y3A3 225 aa11.03□□□□□ -0.64
TPM1-230ENST00000561266 ITGB1BP1O14713 200 aa11.02□□□□□ -0.65
TPM1-230ENST00000561266 HSPA12AO43301 675 aa11.02□□□□□ -0.65
TPM1-230ENST00000561266 EIF4EP06730 217 aaKnown RBP11.02□□□□□ -0.65
TPM1-230ENST00000561266 FCER2P06734 321 aa11.02□□□□□ -0.65
TPM1-230ENST00000561266 CD28P10747 220 aa11.02□□□□□ -0.65
TPM1-230ENST00000561266 Q6ZS49 121 aa11.02□□□□□ -0.65
TPM1-230ENST00000561266 SAMD12Q8N8I0 201 aa11.02□□□□□ -0.65
TPM1-230ENST00000561266 DRAXINQ8NBI3 349 aaPredicted RBP11.02□□□□□ -0.65
TPM1-230ENST00000561266 AUNIPQ9H7T9 357 aa11.02□□□□□ -0.65
TPM1-230ENST00000561266 FBN3Q75N90 2809 aa11.02□□□□□ -0.65
TPM1-230ENST00000561266 NBEAL1Q6ZS30 2694 aa11.01□□□□□ -0.65
TPM1-230ENST00000561266 MEIS3P1A6NDR6 274 aa11.01□□□□□ -0.65
TPM1-230ENST00000561266 DTYMKP23919 212 aa11.01□□□□□ -0.65
TPM1-230ENST00000561266 TALDO1P37837 337 aa11.01□□□□□ -0.65
TPM1-230ENST00000561266 MRPS15P82914 257 aaKnown RBP11.01□□□□□ -0.65
TPM1-230ENST00000561266 SPCS2Q15005 226 aa11.01□□□□□ -0.65
TPM1-230ENST00000561266 SRSF7Q16629 238 aaKnown RBP eCLIP11.01□□□□□ -0.65
TPM1-230ENST00000561266 C9orf152Q5JTZ5 239 aa11.01□□□□□ -0.65
TPM1-230ENST00000561266 GPR141Q7Z602 305 aa11.01□□□□□ -0.65
TPM1-230ENST00000561266 H1FOOQ8IZA3 346 aaPredicted RBP11.01□□□□□ -0.65
TPM1-230ENST00000561266 OR2T10Q8NGZ9 312 aa11.01□□□□□ -0.65
TPM1-230ENST00000561266 DCSTAMPQ9H295 470 aa11.01□□□□□ -0.65
TPM1-230ENST00000561266 LINC00527Q9UJ94 153 aa11.01□□□□□ -0.65
TPM1-230ENST00000561266 ADARB2-AS1A8MUL3 147 aa11□□□□□ -0.65
TPM1-230ENST00000561266 RAB29O14966 203 aa11□□□□□ -0.65
TPM1-230ENST00000561266 MOSP00540 346 aa11□□□□□ -0.65
TPM1-230ENST00000561266 OR8U9P0C7N5 309 aa11□□□□□ -0.65
TPM1-230ENST00000561266 VDAC2P45880 294 aaPredicted RBP11□□□□□ -0.65
TPM1-230ENST00000561266 GNG2P59768 71 aa11□□□□□ -0.65
TPM1-230ENST00000561266 KIR2DS1Q14954 304 aa11□□□□□ -0.65
TPM1-230ENST00000561266 PNLIPRP3Q17RR3 467 aa11□□□□□ -0.65
TPM1-230ENST00000561266 TCTEX1D4Q5JR98 221 aa11□□□□□ -0.65
TPM1-230ENST00000561266 UBE2NLQ5JXB2 153 aa11□□□□□ -0.65
TPM1-230ENST00000561266 FAM131AQ6UXB0 335 aa11□□□□□ -0.65
TPM1-230ENST00000561266 CROCCP3Q8IVE0 287 aa11□□□□□ -0.65
TPM1-230ENST00000561266 ZNF383Q8NA42 475 aa11□□□□□ -0.65
TPM1-230ENST00000561266 OR8U1Q8NH10 309 aa11□□□□□ -0.65
TPM1-230ENST00000561266 NOL4LQ96MY1 436 aaPredicted RBP11□□□□□ -0.65
TPM1-230ENST00000561266 S1PR3Q99500 378 aa11□□□□□ -0.65
TPM1-230ENST00000561266 PIPOXQ9P0Z9 390 aa11□□□□□ -0.65
TPM1-230ENST00000561266 COMMD3Q9UBI1 195 aa11□□□□□ -0.65
TPM1-230ENST00000561266 NCBP2LA6PVI3 153 aaKnown RBP10.99□□□□□ -0.65
TPM1-230ENST00000561266 H0YJW9 148 aa10.99□□□□□ -0.65
TPM1-230ENST00000561266 J3QRK9 145 aa10.99□□□□□ -0.65
TPM1-230ENST00000561266 FGF16O43320 207 aa10.99□□□□□ -0.65
TPM1-230ENST00000561266 TXNL1O43396 289 aa10.99□□□□□ -0.65
TPM1-230ENST00000561266 XRCC3O43542 346 aa10.99□□□□□ -0.65
TPM1-230ENST00000561266 HPGDSO60760 199 aa10.99□□□□□ -0.65
TPM1-230ENST00000561266 TMEM127O75204 238 aa10.99□□□□□ -0.65
TPM1-230ENST00000561266 TSPAN15O95858 294 aa10.99□□□□□ -0.65
TPM1-230ENST00000561266 ELK1P19419 428 aa10.99□□□□□ -0.65
TPM1-230ENST00000561266 NFYAP23511 347 aaPredicted RBP10.99□□□□□ -0.65
TPM1-230ENST00000561266 PRR31Q5SQ13 230 aa10.99□□□□□ -0.65
TPM1-230ENST00000561266 CLVS1Q8IUQ0 354 aaPredicted RBP10.99□□□□□ -0.65
TPM1-230ENST00000561266 FAM71E2Q8N5Q1 922 aa10.99□□□□□ -0.65
TPM1-230ENST00000561266 OR10J5Q8NHC4 309 aa10.99□□□□□ -0.65
TPM1-230ENST00000561266 SGMS2Q8NHU3 365 aa10.99□□□□□ -0.65
TPM1-230ENST00000561266 SNAPC3Q92966 411 aa10.99□□□□□ -0.65
TPM1-230ENST00000561266 HSPB9Q9BQS6 159 aa10.99□□□□□ -0.65
TPM1-230ENST00000561266 SDHAF2Q9NX18 166 aa10.99□□□□□ -0.65
TPM1-230ENST00000561266 MGAM2Q2M2H8 2515 aa10.99□□□□□ -0.65
TPM1-230ENST00000561266 A0A0A6YYH2 397 aa10.98□□□□□ -0.65
TPM1-230ENST00000561266 IGKV1D-13A0A0B4J2D9 117 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms