RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 SLC36A1Q7Z2H8 476 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 TPRA1Q86W33 373 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 OSR2Q8N2R0 312 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 ZNF561Q8N587 486 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 FAM89BQ8N5H3 189 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 Q8N7P7 452 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 OR4S1Q8NGB4 309 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 OR8B3Q8NGG8 313 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 TMEM186Q96B77 213 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 MRPS24Q96EL2 167 aaKnown RBP4.83□□□□□ -1.64
LRRC28-220ENST00000561253 ST6GAL2Q96JF0 529 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 KCTD7Q96MP8 289 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 OR8B2Q96RD0 313 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 DCTN5Q9BTE1 182 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 TM2D1Q9BX74 207 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 METTL9Q9H1A3 318 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 LPAR5Q9H1C0 372 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 ELL3Q9HB65 397 aaPredicted RBP4.83□□□□□ -1.64
LRRC28-220ENST00000561253 VCX3AQ9NNX9 186 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 CLN8Q9UBY8 286 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 OR5V1Q9UGF6 321 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 RPUSD1Q9UJJ7 312 aaKnown RBP4.83□□□□□ -1.64
LRRC28-220ENST00000561253 SSR3Q9UNL2 185 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 GSTK1Q9Y2Q3 226 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 INSIG2Q9Y5U4 225 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 DSCAML1Q8TD84 2053 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 LOC100506127A0A0U1RQW1 187 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 SMIM30A4D0T7 59 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 FOXH1O75593 365 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 CYB5AP00167 134 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 PAHP00439 452 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 TGFAP01135 160 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 PPIAL4GP0DN37 164 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 GTF2F2P13984 249 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 MGMTP16455 207 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 ERP29P30040 261 aaKnown RBP4.82□□□□□ -1.64
LRRC28-220ENST00000561253 GABRA2P47869 451 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 CAPZA1P52907 286 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 TMEM50BP56557 158 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 VBP1P61758 197 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 ARL16Q0P5N6 197 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 ZNF273Q14593 569 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 P2RY14Q15391 338 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 RSU1Q15404 277 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 RAB11BQ15907 218 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 TAF9Q16594 264 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 MPV17LQ2QL34 196 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 VWC2Q2TAL6 325 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 C2orf76Q3KRA6 126 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 TIMM50Q3ZCQ8 353 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 KLF17Q5JT82 389 aaPredicted RBP4.82□□□□□ -1.64
LRRC28-220ENST00000561253 RSBN1Q5VWQ0 802 aaPredicted RBP4.82□□□□□ -1.64
LRRC28-220ENST00000561253 HCP5Q6MZN7 132 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 SFXN4Q6P4A7 337 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 METAP1DQ6UB28 335 aaPredicted RBP4.82□□□□□ -1.64
LRRC28-220ENST00000561253 C18orf65Q6ZTR6 163 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 BTN2A1Q7KYR7 527 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 OR2W3Q7Z3T1 314 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 LINC00596Q86U02 117 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 CHST4Q8NCG5 386 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 OR51D1Q8NGF3 324 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 PLPPR1Q8TBJ4 325 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 TNFRSF14Q92956 283 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 PTX4Q96A99 478 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 SLC25A46Q96AG3 418 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 FAM3DQ96BQ1 224 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 SLC25A38Q96DW6 304 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 SGK494Q96LW2 274 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 TBX15Q96SF7 602 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 GPER1Q99527 375 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 NICN1Q9BSH3 213 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 SIRPDQ9H106 197 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 SLITRK2Q9H156 845 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 NCOR1P1Q9H4R4 102 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 BANF2Q9H503 90 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 LINC00574Q9H8X3 128 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 LPAR2Q9HBW0 351 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 EXOSC4Q9NPD3 245 aaKnown RBP4.82□□□□□ -1.64
LRRC28-220ENST00000561253 C19orf12Q9NSK7 152 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 ZFP57Q9NU63 452 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 ING4Q9UNL4 249 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 ST3GAL6Q9Y274 331 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 KCNK7Q9Y2U2 307 aa4.82□□□□□ -1.64
LRRC28-220ENST00000561253 LOC105371242A0A075B767 164 aa4.81□□□□□ -1.64
LRRC28-220ENST00000561253 NKX6-3A6NJ46 265 aa4.81□□□□□ -1.64
LRRC28-220ENST00000561253 TRIM77I1YAP6 450 aa4.81□□□□□ -1.64
LRRC28-220ENST00000561253 J3QLI3 93 aa4.81□□□□□ -1.64
LRRC28-220ENST00000561253 SIRPB1O00241 398 aa4.81□□□□□ -1.64
LRRC28-220ENST00000561253 PDCD5O14737 125 aa4.81□□□□□ -1.64
LRRC28-220ENST00000561253 NDUFB3O43676 98 aa4.81□□□□□ -1.64
LRRC28-220ENST00000561253 ENSAO43768 121 aaKnown RBP4.81□□□□□ -1.64
LRRC28-220ENST00000561253 PDCD6O75340 191 aa4.81□□□□□ -1.64
LRRC28-220ENST00000561253 ECDO95905 644 aaPredicted RBP4.81□□□□□ -1.64
LRRC28-220ENST00000561253 GLAP06280 429 aa4.81□□□□□ -1.64
LRRC28-220ENST00000561253 OCMP0CE72 109 aaPredicted RBP4.81□□□□□ -1.64
LRRC28-220ENST00000561253 SERPINA2P20848 420 aa4.81□□□□□ -1.64
LRRC28-220ENST00000561253 MYL9P24844 172 aa4.81□□□□□ -1.64
LRRC28-220ENST00000561253 PSMD7P51665 324 aa4.81□□□□□ -1.64
LRRC28-220ENST00000561253 SNU13P55769 128 aaKnown RBP4.81□□□□□ -1.64
LRRC28-220ENST00000561253 LSM3P62310 102 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms