RNA–Protein interactions for RNA: ENST00000560628.1

LDLR-214, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-214ENST00000560628 RAB29O14966 203 aa7.97□□□□□ -1.13
LDLR-214ENST00000560628 SCTP09683 121 aa7.97□□□□□ -1.13
LDLR-214ENST00000560628 CT45A6P0DMU7 189 aa7.97□□□□□ -1.13
LDLR-214ENST00000560628 CT45A5P0DMU8 189 aa7.97□□□□□ -1.13
LDLR-214ENST00000560628 CT45A7P0DMV0 189 aa7.97□□□□□ -1.13
LDLR-214ENST00000560628 OR5H8P0DN80 308 aa7.97□□□□□ -1.13
LDLR-214ENST00000560628 ARSBP15848 533 aa7.97□□□□□ -1.13
LDLR-214ENST00000560628 PPIFP30405 207 aaKnown RBP7.97□□□□□ -1.13
LDLR-214ENST00000560628 CEACAM6P40199 344 aa7.97□□□□□ -1.13
LDLR-214ENST00000560628 MAP2K4P45985 399 aa7.97□□□□□ -1.13
LDLR-214ENST00000560628 CLDN12P56749 244 aa7.97□□□□□ -1.13
LDLR-214ENST00000560628 TPBGQ13641 420 aa7.97□□□□□ -1.13
LDLR-214ENST00000560628 KIAA0141Q14154 515 aaPredicted RBP7.97□□□□□ -1.13
LDLR-214ENST00000560628 C5orf64Q2M2E5 130 aa7.97□□□□□ -1.13
LDLR-214ENST00000560628 FAM131AQ6UXB0 335 aa7.97□□□□□ -1.13
LDLR-214ENST00000560628 NPBQ8NG41 125 aa7.97□□□□□ -1.13
LDLR-214ENST00000560628 OR11H1Q8NG94 326 aa7.97□□□□□ -1.13
LDLR-214ENST00000560628 C4orf3Q8WVX3 66 aa7.97□□□□□ -1.13
LDLR-214ENST00000560628 URM1Q9BTM9 101 aaKnown RBP7.97□□□□□ -1.13
LDLR-214ENST00000560628 FBXL15Q9H469 300 aa7.97□□□□□ -1.13
LDLR-214ENST00000560628 DUSP21Q9H596 190 aa7.97□□□□□ -1.13
LDLR-214ENST00000560628 GNB4Q9HAV0 340 aa7.97□□□□□ -1.13
LDLR-214ENST00000560628 PIPOXQ9P0Z9 390 aa7.97□□□□□ -1.13
LDLR-214ENST00000560628 OR1A1Q9P1Q5 309 aa7.97□□□□□ -1.13
LDLR-214ENST00000560628 KIAA1456Q9P272 454 aa7.97□□□□□ -1.13
LDLR-214ENST00000560628 SLC23A1Q9UHI7 598 aa7.97□□□□□ -1.13
LDLR-214ENST00000560628 SEC14L6B5MCN3 397 aa7.96□□□□□ -1.14
LDLR-214ENST00000560628 H7C2Y5 167 aa7.96□□□□□ -1.14
LDLR-214ENST00000560628 FCN1O00602 326 aa7.96□□□□□ -1.14
LDLR-214ENST00000560628 SLC17A2O00624 439 aa7.96□□□□□ -1.14
LDLR-214ENST00000560628 HSPA12AO43301 675 aa7.96□□□□□ -1.14
LDLR-214ENST00000560628 RGS10O43665 173 aa7.96□□□□□ -1.14
LDLR-214ENST00000560628 HLA-DRB1P01911 266 aa7.96□□□□□ -1.14
LDLR-214ENST00000560628 GSTP1P09211 210 aaKnown RBP7.96□□□□□ -1.14
LDLR-214ENST00000560628 SNRPBP14678 240 aaKnown RBP7.96□□□□□ -1.14
LDLR-214ENST00000560628 CALRP27797 417 aaKnown RBP7.96□□□□□ -1.14
LDLR-214ENST00000560628 ECI1P42126 302 aa7.96□□□□□ -1.14
LDLR-214ENST00000560628 VEGFCP49767 419 aa7.96□□□□□ -1.14
LDLR-214ENST00000560628 TMEM50BP56557 158 aa7.96□□□□□ -1.14
LDLR-214ENST00000560628 LINC00205P59089 165 aa7.96□□□□□ -1.14
LDLR-214ENST00000560628 FABP5Q01469 135 aa7.96□□□□□ -1.14
LDLR-214ENST00000560628 RAB11BQ15907 218 aa7.96□□□□□ -1.14
LDLR-214ENST00000560628 C2orf76Q3KRA6 126 aa7.96□□□□□ -1.14
LDLR-214ENST00000560628 C9orf66Q5T8R8 295 aa7.96□□□□□ -1.14
LDLR-214ENST00000560628 FAM89BQ8N5H3 189 aa7.96□□□□□ -1.14
LDLR-214ENST00000560628 ZNF491Q8N8L2 437 aa7.96□□□□□ -1.14
LDLR-214ENST00000560628 DRAXINQ8NBI3 349 aaPredicted RBP7.96□□□□□ -1.14
LDLR-214ENST00000560628 OR1N2Q8NGR9 330 aa7.96□□□□□ -1.14
LDLR-214ENST00000560628 CASTOR1Q8WTX7 329 aa7.96□□□□□ -1.14
LDLR-214ENST00000560628 ARHGAP5-AS1Q96IT6 56 aa7.96□□□□□ -1.14
LDLR-214ENST00000560628 PRR25Q96S07 402 aa7.96□□□□□ -1.14
LDLR-214ENST00000560628 CLCC1Q96S66 551 aa7.96□□□□□ -1.14
LDLR-214ENST00000560628 B9D2Q9BPU9 175 aa7.96□□□□□ -1.14
LDLR-214ENST00000560628 C11orf54Q9H0W9 315 aaPredicted RBP7.96□□□□□ -1.14
LDLR-214ENST00000560628 RIMS4Q9H426 269 aaPredicted RBP7.96□□□□□ -1.14
LDLR-214ENST00000560628 SCOCQ9UIL1 159 aa7.96□□□□□ -1.14
LDLR-214ENST00000560628 A3GALT2U3KPV4 340 aa7.96□□□□□ -1.14
LDLR-214ENST00000560628 TRBV6-6A0A0A6YYG2 114 aa7.95□□□□□ -1.14
LDLR-214ENST00000560628 H0YJW9 148 aa7.95□□□□□ -1.14
LDLR-214ENST00000560628 RRHO14718 337 aa7.95□□□□□ -1.14
LDLR-214ENST00000560628 RAMP3O60896 148 aa7.95□□□□□ -1.14
LDLR-214ENST00000560628 NDUFA3O95167 84 aa7.95□□□□□ -1.14
LDLR-214ENST00000560628 IGLV1-40P01703 118 aa7.95□□□□□ -1.14
LDLR-214ENST00000560628 CPEP16870 476 aa7.95□□□□□ -1.14
LDLR-214ENST00000560628 ZBTB25P24278 435 aa7.95□□□□□ -1.14
LDLR-214ENST00000560628 CRHBPP24387 322 aa7.95□□□□□ -1.14
LDLR-214ENST00000560628 RAB9AP51151 201 aa7.95□□□□□ -1.14
LDLR-214ENST00000560628 GNB1P62873 340 aa7.95□□□□□ -1.14
LDLR-214ENST00000560628 CX3CL1P78423 397 aa7.95□□□□□ -1.14
LDLR-214ENST00000560628 NDPQ00604 133 aa7.95□□□□□ -1.14
LDLR-214ENST00000560628 PLA2G7Q13093 441 aa7.95□□□□□ -1.14
LDLR-214ENST00000560628 PLGLAQ15195 96 aa7.95□□□□□ -1.14
LDLR-214ENST00000560628 ECSCRQ19T08 205 aa7.95□□□□□ -1.14
LDLR-214ENST00000560628 ZNF260Q3ZCT1 412 aa7.95□□□□□ -1.14
LDLR-214ENST00000560628 HES5Q5TA89 166 aa7.95□□□□□ -1.14
LDLR-214ENST00000560628 MOB1BQ7L9L4 216 aa7.95□□□□□ -1.14
LDLR-214ENST00000560628 MYOZ3Q8TDC0 251 aa7.95□□□□□ -1.14
LDLR-214ENST00000560628 ABHD5Q8WTS1 349 aa7.95□□□□□ -1.14
LDLR-214ENST00000560628 FAM3DQ96BQ1 224 aa7.95□□□□□ -1.14
LDLR-214ENST00000560628 UBE2E2Q96LR5 201 aa7.95□□□□□ -1.14
LDLR-214ENST00000560628 MGLLQ99685 303 aa7.95□□□□□ -1.14
LDLR-214ENST00000560628 CMSS1Q9BQ75 279 aaKnown RBP7.95□□□□□ -1.14
LDLR-214ENST00000560628 CHCHD6Q9BRQ6 235 aa7.95□□□□□ -1.14
LDLR-214ENST00000560628 AGMATQ9BSE5 352 aa7.95□□□□□ -1.14
LDLR-214ENST00000560628 PECRQ9BY49 303 aa7.95□□□□□ -1.14
LDLR-214ENST00000560628 ALX4Q9H161 411 aaPredicted RBP7.95□□□□□ -1.14
LDLR-214ENST00000560628 Q9N2K0 584 aa7.95□□□□□ -1.14
LDLR-214ENST00000560628 ISYNA1Q9NPH2 558 aa7.95□□□□□ -1.14
LDLR-214ENST00000560628 ZMAT5Q9UDW3 170 aaKnown RBP7.95□□□□□ -1.14
LDLR-214ENST00000560628 ZNF580Q9UK33 172 aa7.95□□□□□ -1.14
LDLR-214ENST00000560628 GAB2Q9UQC2 676 aa7.95□□□□□ -1.14
LDLR-214ENST00000560628 VSIG4Q9Y279 399 aa7.95□□□□□ -1.14
LDLR-214ENST00000560628 FBXO7Q9Y3I1 522 aa7.95□□□□□ -1.14
LDLR-214ENST00000560628 IGKV1-6A0A0C4DH72 117 aa7.94□□□□□ -1.14
LDLR-214ENST00000560628 A0A1W2PN81 502 aa7.94□□□□□ -1.14
LDLR-214ENST00000560628 FOXI3A8MTJ6 420 aaPredicted RBP7.94□□□□□ -1.14
LDLR-214ENST00000560628 I3L521 148 aa7.94□□□□□ -1.14
LDLR-214ENST00000560628 SOX15O60248 233 aa7.94□□□□□ -1.14
LDLR-214ENST00000560628 PROP1O75360 226 aa7.94□□□□□ -1.14
LDLR-214ENST00000560628 ARL6IP5O75915 188 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms