RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 H7C2Y5 167 aa6.41□□□□□ -1.38
LRRC28-219ENST00000560483 LDLRAD4O15165 306 aa6.41□□□□□ -1.38
LRRC28-219ENST00000560483 FABP7O15540 132 aa6.41□□□□□ -1.38
LRRC28-219ENST00000560483 TXNL1O43396 289 aa6.41□□□□□ -1.38
LRRC28-219ENST00000560483 YPEL1O60688 119 aa6.41□□□□□ -1.38
LRRC28-219ENST00000560483 NAPSAO96009 420 aa6.41□□□□□ -1.38
LRRC28-219ENST00000560483 FCER2P06734 321 aa6.41□□□□□ -1.38
LRRC28-219ENST00000560483 SCTP09683 121 aa6.41□□□□□ -1.38
LRRC28-219ENST00000560483 CD37P11049 281 aa6.41□□□□□ -1.38
LRRC28-219ENST00000560483 RPS19P39019 145 aaKnown RBP6.41□□□□□ -1.38
LRRC28-219ENST00000560483 GPR12P47775 334 aa6.41□□□□□ -1.38
LRRC28-219ENST00000560483 OR3A3P47888 321 aa6.41□□□□□ -1.38
LRRC28-219ENST00000560483 DYNLT3P51808 116 aa6.41□□□□□ -1.38
LRRC28-219ENST00000560483 ARPC4P59998 168 aa6.41□□□□□ -1.38
LRRC28-219ENST00000560483 NCS1P62166 190 aa6.41□□□□□ -1.38
LRRC28-219ENST00000560483 BLCAPP62952 87 aa6.41□□□□□ -1.38
LRRC28-219ENST00000560483 HTD2P86397 168 aa6.41□□□□□ -1.38
LRRC28-219ENST00000560483 SRSF4Q08170 494 aaKnown RBP6.41□□□□□ -1.38
LRRC28-219ENST00000560483 HABP2Q14520 560 aaPredicted RBP6.41□□□□□ -1.38
LRRC28-219ENST00000560483 PLGLAQ15195 96 aa6.41□□□□□ -1.38
LRRC28-219ENST00000560483 CT45A1Q5HYN5 189 aa6.41□□□□□ -1.38
LRRC28-219ENST00000560483 CCBE1Q6UXH8 406 aaPredicted RBP6.41□□□□□ -1.38
LRRC28-219ENST00000560483 SLC25A48Q6ZT89 311 aaKnown RBP6.41□□□□□ -1.38
LRRC28-219ENST00000560483 C16orf82Q7Z2V1 217 aa6.41□□□□□ -1.38
LRRC28-219ENST00000560483 KLHDC1Q8N7A1 406 aa6.41□□□□□ -1.38
LRRC28-219ENST00000560483 SAMD12Q8N8I0 201 aa6.41□□□□□ -1.38
LRRC28-219ENST00000560483 OR5H6Q8NGV6 325 aa6.41□□□□□ -1.38
LRRC28-219ENST00000560483 OR2T10Q8NGZ9 312 aa6.41□□□□□ -1.38
LRRC28-219ENST00000560483 CT45A3Q8NHU0 189 aa6.41□□□□□ -1.38
LRRC28-219ENST00000560483 PIFOQ8TCI5 191 aa6.41□□□□□ -1.38
LRRC28-219ENST00000560483 NUDCD2Q8WVJ2 157 aa6.41□□□□□ -1.38
LRRC28-219ENST00000560483 RTN4IP1Q8WWV3 396 aaPredicted RBP6.41□□□□□ -1.38
LRRC28-219ENST00000560483 PTX4Q96A99 478 aa6.41□□□□□ -1.38
LRRC28-219ENST00000560483 S100A16Q96FQ6 103 aaKnown RBP6.41□□□□□ -1.38
LRRC28-219ENST00000560483 YPEL2Q96QA6 119 aa6.41□□□□□ -1.38
LRRC28-219ENST00000560483 RANBP3Q9H6Z4 567 aaPredicted RBP6.41□□□□□ -1.38
LRRC28-219ENST00000560483 LINC00574Q9H8X3 128 aa6.41□□□□□ -1.38
LRRC28-219ENST00000560483 OR1A1Q9P1Q5 309 aa6.41□□□□□ -1.38
LRRC28-219ENST00000560483 COMMD3Q9UBI1 195 aa6.41□□□□□ -1.38
LRRC28-219ENST00000560483 MOB4Q9Y3A3 225 aa6.41□□□□□ -1.38
LRRC28-219ENST00000560483 ETV7Q9Y603 341 aa6.41□□□□□ -1.38
LRRC28-219ENST00000560483 SMIM31A0A1B0GVY4 71 aa6.4□□□□□ -1.38
LRRC28-219ENST00000560483 A0A1W2PPI3 338 aa6.4□□□□□ -1.38
LRRC28-219ENST00000560483 FAM25AB3EWG3 89 aa6.4□□□□□ -1.38
LRRC28-219ENST00000560483 FAM25CB3EWG5 89 aa6.4□□□□□ -1.38
LRRC28-219ENST00000560483 FAM25GB3EWG6 89 aa6.4□□□□□ -1.38
LRRC28-219ENST00000560483 LY6LH3BQJ8 138 aa6.4□□□□□ -1.38
LRRC28-219ENST00000560483 M0QZK8 103 aa6.4□□□□□ -1.38
LRRC28-219ENST00000560483 RAB27BO00194 218 aa6.4□□□□□ -1.38
LRRC28-219ENST00000560483 RAB29O14966 203 aa6.4□□□□□ -1.38
LRRC28-219ENST00000560483 TSPAN9O75954 239 aa6.4□□□□□ -1.38
LRRC28-219ENST00000560483 OR2F2O95006 317 aa6.4□□□□□ -1.38
LRRC28-219ENST00000560483 FCGR3AP08637 254 aa6.4□□□□□ -1.38
LRRC28-219ENST00000560483 GSTP1P09211 210 aaKnown RBP6.4□□□□□ -1.38
LRRC28-219ENST00000560483 GSTT2P0CG29 244 aa6.4□□□□□ -1.38
LRRC28-219ENST00000560483 GSTT2BP0CG30 244 aa6.4□□□□□ -1.38
LRRC28-219ENST00000560483 ZNF134P52741 427 aa6.4□□□□□ -1.38
LRRC28-219ENST00000560483 PITPNAQ00169 270 aa6.4□□□□□ -1.38
LRRC28-219ENST00000560483 ZNF816Q0VGE8 651 aaPredicted RBP6.4□□□□□ -1.38
LRRC28-219ENST00000560483 TMEM95Q3KNT9 176 aa6.4□□□□□ -1.38
LRRC28-219ENST00000560483 Q3ZCU0 254 aa6.4□□□□□ -1.38
LRRC28-219ENST00000560483 UBE2NLQ5JXB2 153 aa6.4□□□□□ -1.38
LRRC28-219ENST00000560483 TMEM69Q5SWH9 247 aa6.4□□□□□ -1.38
LRRC28-219ENST00000560483 CENPVQ7Z7K6 275 aaPredicted RBP6.4□□□□□ -1.38
LRRC28-219ENST00000560483 CLVS1Q8IUQ0 354 aaPredicted RBP6.4□□□□□ -1.38
LRRC28-219ENST00000560483 GAPTQ8N292 157 aa6.4□□□□□ -1.38
LRRC28-219ENST00000560483 LINC00311Q8N616 119 aa6.4□□□□□ -1.38
LRRC28-219ENST00000560483 OR4A4PQ8NGN8 299 aa6.4□□□□□ -1.38
LRRC28-219ENST00000560483 OR13F1Q8NGS4 319 aa6.4□□□□□ -1.38
LRRC28-219ENST00000560483 SGMS2Q8NHU3 365 aa6.4□□□□□ -1.38
LRRC28-219ENST00000560483 MISP3Q96FF7 219 aa6.4□□□□□ -1.38
LRRC28-219ENST00000560483 ABHD14BQ96IU4 210 aa6.4□□□□□ -1.38
LRRC28-219ENST00000560483 RBM14Q96PK6 669 aaKnown RBP6.4□□□□□ -1.38
LRRC28-219ENST00000560483 RASL11BQ9BPW5 248 aa6.4□□□□□ -1.38
LRRC28-219ENST00000560483 ZNF251Q9BRH9 671 aa6.4□□□□□ -1.38
LRRC28-219ENST00000560483 C16orf95Q9H693 158 aa6.4□□□□□ -1.38
LRRC28-219ENST00000560483 IFT46Q9NQC8 304 aa6.4□□□□□ -1.38
LRRC28-219ENST00000560483 PIPOXQ9P0Z9 390 aa6.4□□□□□ -1.38
LRRC28-219ENST00000560483 MRPS7Q9Y2R9 242 aaKnown RBP6.4□□□□□ -1.38
LRRC28-219ENST00000560483 MMP24Q9Y5R2 645 aa6.4□□□□□ -1.38
LRRC28-219ENST00000560483 TET2Q6N021 2002 aaPredicted RBP6.4□□□□□ -1.39
LRRC28-219ENST00000560483 SAA2-SAA4A0A096LPE2 208 aa6.39□□□□□ -1.39
LRRC28-219ENST00000560483 TRBV6-6A0A0A6YYG2 114 aa6.39□□□□□ -1.39
LRRC28-219ENST00000560483 MEIS3P1A6NDR6 274 aa6.39□□□□□ -1.39
LRRC28-219ENST00000560483 FOXI3A8MTJ6 420 aaPredicted RBP6.39□□□□□ -1.39
LRRC28-219ENST00000560483 M0QZ24 198 aa6.39□□□□□ -1.39
LRRC28-219ENST00000560483 MFNGO00587 321 aa6.39□□□□□ -1.39
LRRC28-219ENST00000560483 FBXO24O75426 580 aa6.39□□□□□ -1.39
LRRC28-219ENST00000560483 MOSP00540 346 aa6.39□□□□□ -1.39
LRRC28-219ENST00000560483 OR8U9P0C7N5 309 aa6.39□□□□□ -1.39
LRRC28-219ENST00000560483 SAA2P0DJI9 122 aaPredicted RBP6.39□□□□□ -1.39
LRRC28-219ENST00000560483 SMIM18P0DKX4 95 aa6.39□□□□□ -1.39
LRRC28-219ENST00000560483 SOX6P35712 828 aa6.39□□□□□ -1.39
LRRC28-219ENST00000560483 RORCP51449 518 aa6.39□□□□□ -1.39
LRRC28-219ENST00000560483 CBX3Q13185 183 aa6.39□□□□□ -1.39
LRRC28-219ENST00000560483 MMDQ15546 238 aa6.39□□□□□ -1.39
LRRC28-219ENST00000560483 NSUN5P1Q3KNT7 163 aa6.39□□□□□ -1.39
LRRC28-219ENST00000560483 RPL39P5Q59GN2 51 aa6.39□□□□□ -1.39
LRRC28-219ENST00000560483 IGSF11Q5DX21 431 aa6.39□□□□□ -1.39
LRRC28-219ENST00000560483 HACD4Q5VWC8 232 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms