RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 BPESC1Q9GZL8 116 aa9.26□□□□□ -0.93
USP3-218ENST00000560202 TOLLIPQ9H0E2 274 aa9.26□□□□□ -0.93
USP3-218ENST00000560202 LINC00574Q9H8X3 128 aa9.26□□□□□ -0.93
USP3-218ENST00000560202 PIPOXQ9P0Z9 390 aa9.26□□□□□ -0.93
USP3-218ENST00000560202 C14orf166Q9Y224 244 aaKnown RBP9.26□□□□□ -0.93
USP3-218ENST00000560202 CRYBG3Q68DQ2 2970 aa9.26□□□□□ -0.93
USP3-218ENST00000560202 USF3Q68DE3 2245 aa9.26□□□□□ -0.93
USP3-218ENST00000560202 HELZ2Q9BYK8 2649 aaKnown RBP9.26□□□□□ -0.93
USP3-218ENST00000560202 IGHV3-43A0A0B4J1X8 118 aa9.26□□□□□ -0.93
USP3-218ENST00000560202 IGKV1D-13A0A0B4J2D9 117 aa9.26□□□□□ -0.93
USP3-218ENST00000560202 F5H0A9 414 aaPredicted RBP9.26□□□□□ -0.93
USP3-218ENST00000560202 OR4E1P0C645 316 aa9.26□□□□□ -0.93
USP3-218ENST00000560202 IGHV3-43DP0DP04 118 aa9.26□□□□□ -0.93
USP3-218ENST00000560202 IGKV1-13P0DP09 117 aa9.26□□□□□ -0.93
USP3-218ENST00000560202 RPA2P15927 270 aa9.26□□□□□ -0.93
USP3-218ENST00000560202 AKR1C4P17516 323 aa9.26□□□□□ -0.93
USP3-218ENST00000560202 OMGP23515 440 aa9.26□□□□□ -0.93
USP3-218ENST00000560202 TAS2R31P59538 309 aa9.26□□□□□ -0.93
USP3-218ENST00000560202 GNMTQ14749 295 aa9.26□□□□□ -0.93
USP3-218ENST00000560202 LTC4SQ16873 150 aa9.26□□□□□ -0.93
USP3-218ENST00000560202 C4orf46Q504U0 113 aa9.26□□□□□ -0.93
USP3-218ENST00000560202 FAM53AQ6NSI3 398 aaPredicted RBP9.26□□□□□ -0.93
USP3-218ENST00000560202 LPCAT3Q6P1A2 487 aa9.26□□□□□ -0.93
USP3-218ENST00000560202 OR10V1Q8NGI7 309 aa9.26□□□□□ -0.93
USP3-218ENST00000560202 SECTM1Q8WVN6 248 aa9.26□□□□□ -0.93
USP3-218ENST00000560202 PERPQ96FX8 193 aa9.26□□□□□ -0.93
USP3-218ENST00000560202 CXorf58Q96LI9 332 aa9.26□□□□□ -0.93
USP3-218ENST00000560202 C12orf57Q99622 126 aa9.26□□□□□ -0.93
USP3-218ENST00000560202 RSRP1Q9BUV0 290 aa9.26□□□□□ -0.93
USP3-218ENST00000560202 NKX6-2Q9C056 277 aaPredicted RBP9.26□□□□□ -0.93
USP3-218ENST00000560202 GAL3ST2Q9H3Q3 398 aa9.26□□□□□ -0.93
USP3-218ENST00000560202 MLXQ9UH92 298 aa9.26□□□□□ -0.93
USP3-218ENST00000560202 JPT1Q9UK76 154 aa9.26□□□□□ -0.93
USP3-218ENST00000560202 TACC2O95359 2948 aa9.25□□□□□ -0.93
USP3-218ENST00000560202 FBN2P35556 2912 aa9.25□□□□□ -0.93
USP3-218ENST00000560202 S100A6P06703 90 aa9.25□□□□□ -0.93
USP3-218ENST00000560202 GNRHRP30968 328 aa9.25□□□□□ -0.93
USP3-218ENST00000560202 PPP1CCP36873 323 aaKnown RBP9.25□□□□□ -0.93
USP3-218ENST00000560202 RAB13P51153 203 aa9.25□□□□□ -0.93
USP3-218ENST00000560202 LUMP51884 338 aaPredicted RBP9.25□□□□□ -0.93
USP3-218ENST00000560202 LOXL3P58215 753 aa9.25□□□□□ -0.93
USP3-218ENST00000560202 TMEM128Q5BJH2 165 aa9.25□□□□□ -0.93
USP3-218ENST00000560202 HIST2H2BCQ6DN03 193 aa9.25□□□□□ -0.93
USP3-218ENST00000560202 FAHD2BQ6P2I3 314 aaPredicted RBP9.25□□□□□ -0.93
USP3-218ENST00000560202 LDLRAD3Q86YD5 345 aa9.25□□□□□ -0.93
USP3-218ENST00000560202 OR52B4Q8NGK2 314 aa9.25□□□□□ -0.93
USP3-218ENST00000560202 OR1S1Q8NH92 325 aa9.25□□□□□ -0.93
USP3-218ENST00000560202 COQ8AQ8NI60 647 aa9.25□□□□□ -0.93
USP3-218ENST00000560202 FAM168AQ92567 244 aa9.25□□□□□ -0.93
USP3-218ENST00000560202 TMEM230Q96A57 120 aa9.25□□□□□ -0.93
USP3-218ENST00000560202 FAHD2AQ96GK7 314 aa9.25□□□□□ -0.93
USP3-218ENST00000560202 ZNF714Q96N38 554 aa9.25□□□□□ -0.93
USP3-218ENST00000560202 SLC5A7Q9GZV3 580 aa9.25□□□□□ -0.93
USP3-218ENST00000560202 PARP12Q9H0J9 701 aaKnown RBP9.25□□□□□ -0.93
USP3-218ENST00000560202 SAV1Q9H4B6 383 aaPredicted RBP9.25□□□□□ -0.93
USP3-218ENST00000560202 COA4Q9NYJ1 87 aa9.25□□□□□ -0.93
USP3-218ENST00000560202 IDI2-AS1Q9NZ38 188 aa9.25□□□□□ -0.93
USP3-218ENST00000560202 GNG12Q9UBI6 72 aa9.25□□□□□ -0.93
USP3-218ENST00000560202 A0A0D9SG52 128 aa9.24□□□□□ -0.93
USP3-218ENST00000560202 RAB19A4D1S5 217 aa9.24□□□□□ -0.93
USP3-218ENST00000560202 NDUFS8O00217 210 aa9.24□□□□□ -0.93
USP3-218ENST00000560202 YPEL1O60688 119 aa9.24□□□□□ -0.93
USP3-218ENST00000560202 S100A8P05109 93 aa9.24□□□□□ -0.93
USP3-218ENST00000560202 CCL3L1P16619 93 aa9.24□□□□□ -0.93
USP3-218ENST00000560202 MEOX2P50222 304 aa9.24□□□□□ -0.93
USP3-218ENST00000560202 UBE2MP61081 183 aaKnown RBP9.24□□□□□ -0.93
USP3-218ENST00000560202 GNB2P62879 340 aa9.24□□□□□ -0.93
USP3-218ENST00000560202 PPP1R1AQ13522 171 aa9.24□□□□□ -0.93
USP3-218ENST00000560202 TMEM30BQ3MIR4 351 aa9.24□□□□□ -0.93
USP3-218ENST00000560202 ABCA11PQ4W5N1 156 aa9.24□□□□□ -0.93
USP3-218ENST00000560202 MORN2Q502X0 79 aa9.24□□□□□ -0.93
USP3-218ENST00000560202 CLEC2AQ6UVW9 174 aa9.24□□□□□ -0.93
USP3-218ENST00000560202 SVBPQ8N300 66 aa9.24□□□□□ -0.93
USP3-218ENST00000560202 C10orf105Q8TEF2 133 aa9.24□□□□□ -0.93
USP3-218ENST00000560202 YPEL2Q96QA6 119 aa9.24□□□□□ -0.93
USP3-218ENST00000560202 PIMREGQ9BSJ6 248 aa9.24□□□□□ -0.93
USP3-218ENST00000560202 PDCD10Q9BUL8 212 aa9.24□□□□□ -0.93
USP3-218ENST00000560202 CCL28Q9NRJ3 127 aa9.24□□□□□ -0.93
USP3-218ENST00000560202 RPUSD1Q9UJJ7 312 aaKnown RBP9.24□□□□□ -0.93
USP3-218ENST00000560202 RBM7Q9Y580 266 aaKnown RBP9.24□□□□□ -0.93
USP3-218ENST00000560202 HSD17B6O14756 317 aa9.23□□□□□ -0.93
USP3-218ENST00000560202 PHF1O43189 567 aaPredicted RBP9.23□□□□□ -0.93
USP3-218ENST00000560202 MMP23AO75900 390 aa9.23□□□□□ -0.93
USP3-218ENST00000560202 IGHV2-5P01817 119 aa9.23□□□□□ -0.93
USP3-218ENST00000560202 HLA-AP01891 365 aaKnown RBP9.23□□□□□ -0.93
USP3-218ENST00000560202 APOC3P02656 99 aa9.23□□□□□ -0.93
USP3-218ENST00000560202 OR8U9P0C7N5 309 aa9.23□□□□□ -0.93
USP3-218ENST00000560202 SMIM6P0DI80 62 aa9.23□□□□□ -0.93
USP3-218ENST00000560202 PIGPP57054 158 aa9.23□□□□□ -0.93
USP3-218ENST00000560202 DHRS2Q13268 280 aa9.23□□□□□ -0.93
USP3-218ENST00000560202 PHLDA2Q53GA4 152 aa9.23□□□□□ -0.93
USP3-218ENST00000560202 PRAMEF5Q5TYX0 476 aa9.23□□□□□ -0.93
USP3-218ENST00000560202 ZNF818PQ6ZRF7 136 aa9.23□□□□□ -0.93
USP3-218ENST00000560202 LYG2Q86SG7 212 aa9.23□□□□□ -0.93
USP3-218ENST00000560202 SPAG16Q8N0X2 631 aa9.23□□□□□ -0.93
USP3-218ENST00000560202 OR10A7Q8NGE5 316 aa9.23□□□□□ -0.93
USP3-218ENST00000560202 OR52M1Q8NGK5 317 aa9.23□□□□□ -0.93
USP3-218ENST00000560202 OR8U1Q8NH10 309 aa9.23□□□□□ -0.93
USP3-218ENST00000560202 C8orf46Q8TAG6 207 aa9.23□□□□□ -0.93
USP3-218ENST00000560202 SSBP3Q9BWW4 388 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms