RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 RDH8Q9NYR8 311 aa13.47□□□□□ -0.25
RPL28-209ENST00000560055 CCDC59Q9P031 241 aaKnown RBP13.47□□□□□ -0.25
RPL28-209ENST00000560055 SAA2-SAA4A0A096LPE2 208 aa13.46□□□□□ -0.25
RPL28-209ENST00000560055 A0A1B0GUS0 222 aa13.46□□□□□ -0.25
RPL28-209ENST00000560055 BET1O15155 118 aa13.46□□□□□ -0.25
RPL28-209ENST00000560055 NOL3O60936 208 aaKnown RBP13.46□□□□□ -0.25
RPL28-209ENST00000560055 OR2F2O95006 317 aa13.46□□□□□ -0.25
RPL28-209ENST00000560055 SNRNP70P08621 437 aaKnown RBP13.46□□□□□ -0.25
RPL28-209ENST00000560055 FAM106CPP0CH98 169 aa13.46□□□□□ -0.25
RPL28-209ENST00000560055 SAA2P0DJI9 122 aaPredicted RBP13.46□□□□□ -0.25
RPL28-209ENST00000560055 OR3A3P47888 321 aa13.46□□□□□ -0.25
RPL28-209ENST00000560055 EBI3Q14213 229 aa13.46□□□□□ -0.25
RPL28-209ENST00000560055 FAM71F2Q6NXP2 309 aa13.46□□□□□ -0.25
RPL28-209ENST00000560055 MZT2AQ6P582 158 aa13.46□□□□□ -0.25
RPL28-209ENST00000560055 DTX3Q8N9I9 347 aa13.46□□□□□ -0.25
RPL28-209ENST00000560055 OR10J5Q8NHC4 309 aa13.46□□□□□ -0.25
RPL28-209ENST00000560055 RBM14Q96PK6 669 aaKnown RBP13.46□□□□□ -0.25
RPL28-209ENST00000560055 ZNF251Q9BRH9 671 aa13.46□□□□□ -0.25
RPL28-209ENST00000560055 GHITMQ9H3K2 345 aa13.46□□□□□ -0.25
RPL28-209ENST00000560055 PIPOXQ9P0Z9 390 aa13.46□□□□□ -0.25
RPL28-209ENST00000560055 RAB29O14966 203 aa13.45□□□□□ -0.26
RPL28-209ENST00000560055 HLA-DQB1P01920 261 aa13.45□□□□□ -0.26
RPL28-209ENST00000560055 LPLP06858 475 aa13.45□□□□□ -0.26
RPL28-209ENST00000560055 CD1BP29016 333 aa13.45□□□□□ -0.26
RPL28-209ENST00000560055 SOX6P35712 828 aa13.45□□□□□ -0.26
RPL28-209ENST00000560055 C12orf54Q6X4T0 127 aa13.45□□□□□ -0.26
RPL28-209ENST00000560055 MOB3BQ86TA1 216 aa13.45□□□□□ -0.26
RPL28-209ENST00000560055 HOGA1Q86XE5 327 aa13.45□□□□□ -0.26
RPL28-209ENST00000560055 H1FOOQ8IZA3 346 aaPredicted RBP13.45□□□□□ -0.26
RPL28-209ENST00000560055 GVQW1Q8N7I0 195 aa13.45□□□□□ -0.26
RPL28-209ENST00000560055 LINC01006Q8NI28 216 aa13.45□□□□□ -0.26
RPL28-209ENST00000560055 CAPSLQ8WWF8 208 aa13.45□□□□□ -0.26
RPL28-209ENST00000560055 NPFFR1Q9GZQ6 430 aa13.45□□□□□ -0.26
RPL28-209ENST00000560055 ANXA10Q9UJ72 324 aa13.45□□□□□ -0.26
RPL28-209ENST00000560055 ANAPC10Q9UM13 185 aa13.45□□□□□ -0.26
RPL28-209ENST00000560055 IGHV3-72A0A0B4J1Y9 119 aa13.44□□□□□ -0.26
RPL28-209ENST00000560055 CLPSL1A2RUU4 121 aa13.44□□□□□ -0.26
RPL28-209ENST00000560055 ZNF736B4DX44 427 aaPredicted RBP13.44□□□□□ -0.26
RPL28-209ENST00000560055 IGKV1D-33P01593 117 aa13.44□□□□□ -0.26
RPL28-209ENST00000560055 IGKV1-33P01594 117 aa13.44□□□□□ -0.26
RPL28-209ENST00000560055 LSAMPQ13449 338 aa13.44□□□□□ -0.26
RPL28-209ENST00000560055 CNIH2Q6PI25 160 aa13.44□□□□□ -0.26
RPL28-209ENST00000560055 Q8N2B8 174 aa13.44□□□□□ -0.26
RPL28-209ENST00000560055 Q8N6K4 173 aa13.44□□□□□ -0.26
RPL28-209ENST00000560055 OR4C13Q8NGP0 309 aa13.44□□□□□ -0.26
RPL28-209ENST00000560055 SNAPC3Q92966 411 aa13.44□□□□□ -0.26
RPL28-209ENST00000560055 ABHD14BQ96IU4 210 aa13.44□□□□□ -0.26
RPL28-209ENST00000560055 SLC25A33Q9BSK2 321 aa13.44□□□□□ -0.26
RPL28-209ENST00000560055 MRPL20Q9BYC9 149 aaKnown RBP13.44□□□□□ -0.26
RPL28-209ENST00000560055 ZNF702PQ9H963 129 aa13.44□□□□□ -0.26
RPL28-209ENST00000560055 BEX1Q9HBH7 125 aa13.44□□□□□ -0.26
RPL28-209ENST00000560055 PROP1O75360 226 aa13.43□□□□□ -0.26
RPL28-209ENST00000560055 AMY1AP04745 511 aa13.43□□□□□ -0.26
RPL28-209ENST00000560055 AMY2AP04746 511 aa13.43□□□□□ -0.26
RPL28-209ENST00000560055 CTXN2P0C2S0 81 aa13.43□□□□□ -0.26
RPL28-209ENST00000560055 CBX5P45973 191 aa13.43□□□□□ -0.26
RPL28-209ENST00000560055 RPL39P5Q59GN2 51 aa13.43□□□□□ -0.26
RPL28-209ENST00000560055 BEST4Q8NFU0 473 aa13.43□□□□□ -0.26
RPL28-209ENST00000560055 EAF1Q96JC9 268 aaPredicted RBP13.43□□□□□ -0.26
RPL28-209ENST00000560055 NABP2Q9BQ15 211 aa13.43□□□□□ -0.26
RPL28-209ENST00000560055 SLIRPQ9GZT3 109 aaKnown RBP13.43□□□□□ -0.26
RPL28-209ENST00000560055 MIXL1Q9H2W2 232 aa13.43□□□□□ -0.26
RPL28-209ENST00000560055 CMYA5Q8N3K9 4069 aa13.43□□□□□ -0.26
RPL28-209ENST00000560055 SMIM31A0A1B0GVY4 71 aa13.42□□□□□ -0.26
RPL28-209ENST00000560055 ZNF701M0R085 212 aaPredicted RBP13.42□□□□□ -0.26
RPL28-209ENST00000560055 TMEM11P17152 192 aa13.42□□□□□ -0.26
RPL28-209ENST00000560055 PROK1P58294 105 aa13.42□□□□□ -0.26
RPL28-209ENST00000560055 BLCAPP62952 87 aa13.42□□□□□ -0.26
RPL28-209ENST00000560055 AKR1E2Q96JD6 320 aa13.42□□□□□ -0.26
RPL28-209ENST00000560055 S1PR3Q99500 378 aa13.42□□□□□ -0.26
RPL28-209ENST00000560055 GINS4Q9BRT9 223 aa13.42□□□□□ -0.26
RPL28-209ENST00000560055 ADAM30Q9UKF2 790 aa13.42□□□□□ -0.26
RPL28-209ENST00000560055 RNF150Q9ULK6 438 aa13.42□□□□□ -0.26
RPL28-209ENST00000560055 GAB2Q9UQC2 676 aa13.42□□□□□ -0.26
RPL28-209ENST00000560055 MEIS3P1A6NDR6 274 aa13.41□□□□□ -0.26
RPL28-209ENST00000560055 FAM25AB3EWG3 89 aa13.41□□□□□ -0.26
RPL28-209ENST00000560055 FAM25CB3EWG5 89 aa13.41□□□□□ -0.26
RPL28-209ENST00000560055 FAM25GB3EWG6 89 aa13.41□□□□□ -0.26
RPL28-209ENST00000560055 CTDSP2O14595 271 aa13.41□□□□□ -0.26
RPL28-209ENST00000560055 TPPPO94811 219 aa13.41□□□□□ -0.26
RPL28-209ENST00000560055 OR8U9P0C7N5 309 aa13.41□□□□□ -0.26
RPL28-209ENST00000560055 CT45A6P0DMU7 189 aa13.41□□□□□ -0.26
RPL28-209ENST00000560055 CT45A5P0DMU8 189 aa13.41□□□□□ -0.26
RPL28-209ENST00000560055 CT45A7P0DMV0 189 aa13.41□□□□□ -0.26
RPL28-209ENST00000560055 NAT1P18440 290 aa13.41□□□□□ -0.26
RPL28-209ENST00000560055 PRSS3P35030 304 aa13.41□□□□□ -0.26
RPL28-209ENST00000560055 HES1Q14469 280 aa13.41□□□□□ -0.26
RPL28-209ENST00000560055 Q6ZS46 218 aa13.41□□□□□ -0.26
RPL28-209ENST00000560055 LAX1Q8IWV1 398 aa13.41□□□□□ -0.26
RPL28-209ENST00000560055 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.41□□□□□ -0.26
RPL28-209ENST00000560055 OR2T10Q8NGZ9 312 aa13.41□□□□□ -0.26
RPL28-209ENST00000560055 OR8U1Q8NH10 309 aa13.41□□□□□ -0.26
RPL28-209ENST00000560055 GPX8Q8TED1 209 aa13.41□□□□□ -0.26
RPL28-209ENST00000560055 WFDC12Q8WWY7 111 aa13.41□□□□□ -0.26
RPL28-209ENST00000560055 ZNF747Q9BV97 191 aa13.41□□□□□ -0.26
RPL28-209ENST00000560055 NXF2Q9GZY0 626 aaKnown RBP13.41□□□□□ -0.26
RPL28-209ENST00000560055 RSL24D1Q9UHA3 163 aaKnown RBP13.41□□□□□ -0.26
RPL28-209ENST00000560055 MRPS7Q9Y2R9 242 aaKnown RBP13.41□□□□□ -0.26
RPL28-209ENST00000560055 SIGLEC9Q9Y336 463 aa13.41□□□□□ -0.26
RPL28-209ENST00000560055 MOB4Q9Y3A3 225 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms