RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 FBXL15Q9H469 300 aa7.08□□□□□ -1.28
HDDC3-204ENST00000559834 SLA2Q9H6Q3 261 aa7.08□□□□□ -1.28
HDDC3-204ENST00000559834 TPSG1Q9NRR2 321 aa7.08□□□□□ -1.28
HDDC3-204ENST00000559834 SMPD3Q9NY59 655 aaPredicted RBP7.08□□□□□ -1.28
HDDC3-204ENST00000559834 CLEC2DQ9UHP7 191 aa7.08□□□□□ -1.28
HDDC3-204ENST00000559834 A3GALT2U3KPV4 340 aa7.08□□□□□ -1.28
HDDC3-204ENST00000559834 IGHV4OR15-8A0A075B7B6 117 aa7.07□□□□□ -1.28
HDDC3-204ENST00000559834 A0A087WW49 117 aa7.07□□□□□ -1.28
HDDC3-204ENST00000559834 LCE6AA0A183 80 aa7.07□□□□□ -1.28
HDDC3-204ENST00000559834 TRIM64CA6NLI5 447 aa7.07□□□□□ -1.28
HDDC3-204ENST00000559834 H7C2Y5 167 aa7.07□□□□□ -1.28
HDDC3-204ENST00000559834 HSPA12AO43301 675 aa7.07□□□□□ -1.28
HDDC3-204ENST00000559834 SOX15O60248 233 aa7.07□□□□□ -1.28
HDDC3-204ENST00000559834 LALBAP00709 142 aa7.07□□□□□ -1.28
HDDC3-204ENST00000559834 TFAP2AP05549 437 aa7.07□□□□□ -1.28
HDDC3-204ENST00000559834 CD1AP06126 327 aa7.07□□□□□ -1.28
HDDC3-204ENST00000559834 UBBP0CG47 229 aa7.07□□□□□ -1.28
HDDC3-204ENST00000559834 CT45A6P0DMU7 189 aa7.07□□□□□ -1.28
HDDC3-204ENST00000559834 CT45A5P0DMU8 189 aa7.07□□□□□ -1.28
HDDC3-204ENST00000559834 CT45A7P0DMV0 189 aa7.07□□□□□ -1.28
HDDC3-204ENST00000559834 ZP3P21754 424 aa7.07□□□□□ -1.28
HDDC3-204ENST00000559834 SRSF7Q16629 238 aaKnown RBP eCLIP7.07□□□□□ -1.28
HDDC3-204ENST00000559834 C19orf54Q5BKX5 351 aa7.07□□□□□ -1.28
HDDC3-204ENST00000559834 TTC23Q5W5X9 447 aa7.07□□□□□ -1.28
HDDC3-204ENST00000559834 UNQ5815/PRO19632Q6UWF5 114 aa7.07□□□□□ -1.28
HDDC3-204ENST00000559834 PPP1R27Q86WC6 154 aa7.07□□□□□ -1.28
HDDC3-204ENST00000559834 LYPD6Q86Y78 171 aa7.07□□□□□ -1.28
HDDC3-204ENST00000559834 ANKRD13BQ86YJ7 626 aa7.07□□□□□ -1.28
HDDC3-204ENST00000559834 SGPP2Q8IWX5 399 aa7.07□□□□□ -1.28
HDDC3-204ENST00000559834 PQLC1Q8N2U9 271 aa7.07□□□□□ -1.28
HDDC3-204ENST00000559834 ZFP41Q8N8Y5 198 aa7.07□□□□□ -1.28
HDDC3-204ENST00000559834 SETD9Q8NE22 299 aa7.07□□□□□ -1.28
HDDC3-204ENST00000559834 FAM46BQ96A09 425 aa7.07□□□□□ -1.28
HDDC3-204ENST00000559834 ISOC1Q96CN7 298 aa7.07□□□□□ -1.28
HDDC3-204ENST00000559834 RHOVQ96L33 236 aa7.07□□□□□ -1.28
HDDC3-204ENST00000559834 PGLYRP3Q96LB9 341 aa7.07□□□□□ -1.28
HDDC3-204ENST00000559834 MS4A10Q96PG2 267 aa7.07□□□□□ -1.28
HDDC3-204ENST00000559834 RIMS4Q9H426 269 aaPredicted RBP7.07□□□□□ -1.28
HDDC3-204ENST00000559834 S100A14Q9HCY8 104 aa7.07□□□□□ -1.28
HDDC3-204ENST00000559834 RANGRFQ9HD47 186 aaPredicted RBP7.07□□□□□ -1.28
HDDC3-204ENST00000559834 SLC23A1Q9UHI7 598 aa7.07□□□□□ -1.28
HDDC3-204ENST00000559834 STUB1Q9UNE7 303 aa7.07□□□□□ -1.28
HDDC3-204ENST00000559834 WASHC3Q9Y3C0 194 aa7.07□□□□□ -1.28
HDDC3-204ENST00000559834 A0A0G2JLM5 398 aa7.06□□□□□ -1.28
HDDC3-204ENST00000559834 EFCAB10A6NFE3 127 aa7.06□□□□□ -1.28
HDDC3-204ENST00000559834 A8MZ25 164 aa7.06□□□□□ -1.28
HDDC3-204ENST00000559834 FCN1O00602 326 aa7.06□□□□□ -1.28
HDDC3-204ENST00000559834 ITGB1BP1O14713 200 aa7.06□□□□□ -1.28
HDDC3-204ENST00000559834 SLC22A1O15245 554 aa7.06□□□□□ -1.28
HDDC3-204ENST00000559834 ST8SIA5O15466 376 aa7.06□□□□□ -1.28
HDDC3-204ENST00000559834 IGHV3-11P01762 117 aa7.06□□□□□ -1.28
HDDC3-204ENST00000559834 IGHV4-30-4P0DP06 118 aa7.06□□□□□ -1.28
HDDC3-204ENST00000559834 EGR2P11161 476 aaPredicted RBP7.06□□□□□ -1.28
HDDC3-204ENST00000559834 CELP19835 753 aa7.06□□□□□ -1.28
HDDC3-204ENST00000559834 TPPP2P59282 170 aa7.06□□□□□ -1.28
HDDC3-204ENST00000559834 ST3GAL4Q11206 333 aa7.06□□□□□ -1.28
HDDC3-204ENST00000559834 HMGN3Q15651 99 aa7.06□□□□□ -1.28
HDDC3-204ENST00000559834 LRRC36Q1X8D7 754 aa7.06□□□□□ -1.28
HDDC3-204ENST00000559834 C6orf141Q5SZD1 244 aa7.06□□□□□ -1.28
HDDC3-204ENST00000559834 GLT8D1Q68CQ7 371 aa7.06□□□□□ -1.28
HDDC3-204ENST00000559834 FAM131AQ6UXB0 335 aa7.06□□□□□ -1.28
HDDC3-204ENST00000559834 ZNF485Q8NCK3 441 aa7.06□□□□□ -1.28
HDDC3-204ENST00000559834 LFNGQ8NES3 379 aa7.06□□□□□ -1.28
HDDC3-204ENST00000559834 OR5AN1Q8NGI8 311 aa7.06□□□□□ -1.28
HDDC3-204ENST00000559834 KCNG3Q8TAE7 436 aa7.06□□□□□ -1.28
HDDC3-204ENST00000559834 CASTOR1Q8WTX7 329 aa7.06□□□□□ -1.28
HDDC3-204ENST00000559834 EDARADDQ8WWZ3 215 aa7.06□□□□□ -1.28
HDDC3-204ENST00000559834 DERL3Q96Q80 235 aa7.06□□□□□ -1.28
HDDC3-204ENST00000559834 CLCC1Q96S66 551 aa7.06□□□□□ -1.28
HDDC3-204ENST00000559834 TM2D3Q9BRN9 247 aa7.06□□□□□ -1.28
HDDC3-204ENST00000559834 FAAP24Q9BTP7 215 aa7.06□□□□□ -1.28
HDDC3-204ENST00000559834 RSRP1Q9BUV0 290 aa7.06□□□□□ -1.28
HDDC3-204ENST00000559834 IFI27L2Q9H2X8 130 aa7.06□□□□□ -1.28
HDDC3-204ENST00000559834 CHMP1AQ9HD42 196 aaPredicted RBP7.06□□□□□ -1.28
HDDC3-204ENST00000559834 ZNF355PQ9NSJ1 428 aa7.06□□□□□ -1.28
HDDC3-204ENST00000559834 CNOT2Q9NZN8 540 aaKnown RBP7.06□□□□□ -1.28
HDDC3-204ENST00000559834 METTL1Q9UBP6 276 aaKnown RBP7.06□□□□□ -1.28
HDDC3-204ENST00000559834 MGAT4AQ9UM21 535 aa7.06□□□□□ -1.28
HDDC3-204ENST00000559834 FBXO7Q9Y3I1 522 aa7.06□□□□□ -1.28
HDDC3-204ENST00000559834 DNAH9Q9NYC9 4486 aa7.06□□□□□ -1.28
HDDC3-204ENST00000559834 PNMA8CA0A1B0GUJ8 204 aa7.05□□□□□ -1.28
HDDC3-204ENST00000559834 C13orf42A0A1B0GVH6 325 aa7.05□□□□□ -1.28
HDDC3-204ENST00000559834 H0Y980 276 aa7.05□□□□□ -1.28
HDDC3-204ENST00000559834 H0YJW9 148 aa7.05□□□□□ -1.28
HDDC3-204ENST00000559834 ATP6V1G2O95670 118 aa7.05□□□□□ -1.28
HDDC3-204ENST00000559834 IGLV1-51P01701 117 aa7.05□□□□□ -1.28
HDDC3-204ENST00000559834 TRGV3P03979 118 aa7.05□□□□□ -1.28
HDDC3-204ENST00000559834 IFNA6P05013 189 aa7.05□□□□□ -1.28
HDDC3-204ENST00000559834 CPEP16870 476 aa7.05□□□□□ -1.28
HDDC3-204ENST00000559834 ZBTB25P24278 435 aa7.05□□□□□ -1.28
HDDC3-204ENST00000559834 RPS16P62249 146 aaKnown RBP7.05□□□□□ -1.28
HDDC3-204ENST00000559834 NDPQ00604 133 aa7.05□□□□□ -1.28
HDDC3-204ENST00000559834 TATDN3Q17R31 274 aa7.05□□□□□ -1.28
HDDC3-204ENST00000559834 MOGAT2Q3SYC2 334 aa7.05□□□□□ -1.28
HDDC3-204ENST00000559834 RPL39P5Q59GN2 51 aa7.05□□□□□ -1.28
HDDC3-204ENST00000559834 ZFAND6Q6FIF0 208 aa7.05□□□□□ -1.28
HDDC3-204ENST00000559834 GLDNQ6ZMI3 551 aaPredicted RBP7.05□□□□□ -1.28
HDDC3-204ENST00000559834 MOB1BQ7L9L4 216 aa7.05□□□□□ -1.28
HDDC3-204ENST00000559834 C6orf201Q7Z4U5 140 aa7.05□□□□□ -1.28
HDDC3-204ENST00000559834 C5orf24Q7Z6I8 188 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms