RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 OR52W1Q6IF63 320 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 OR2W3Q7Z3T1 314 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 TRAPPC6BQ86SZ2 158 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 THNSL2Q86YJ6 484 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 C5orf56Q8N8D9 126 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 SAMD12Q8N8I0 201 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 ZFP41Q8N8Y5 198 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 CCDC54Q8NEL0 328 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 OR4X2Q8NGF9 303 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 OR51T1Q8NGJ9 327 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 OR5D18Q8NGL1 313 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 OR13A1Q8NGR1 328 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 ZNF596Q8TC21 504 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 LEAP2Q969E1 77 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 SPSB1Q96BD6 273 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 ZNF486Q96H40 463 aaPredicted RBP4.56□□□□□ -1.68
USP3-215ENST00000559771 Q96M66 194 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 C8orf49Q96NF6 230 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 DUX3Q96PT4 197 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 THAP7Q9BT49 309 aaPredicted RBP4.56□□□□□ -1.68
USP3-215ENST00000559771 ABCG5Q9H222 651 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 GAL3ST2Q9H3Q3 398 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 LINC00574Q9H8X3 128 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 NEK6Q9HC98 313 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 ING3Q9NXR8 418 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 EXTL2Q9UBQ6 330 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 LINC00527Q9UJ94 153 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 GNG8Q9UK08 70 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 LSM4Q9Y4Z0 139 aaKnown RBP4.56□□□□□ -1.68
USP3-215ENST00000559771 NUBP2Q9Y5Y2 271 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 CSMD3Q7Z407 3707 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 LYSTQ99698 3801 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 TRGV10A0A0A0MS01 117 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 TRAV39A0A0B4J263 110 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 TRAV24A0A0B4J272 114 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 TRBV5-5A0A0J9YX44 114 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 KBTBD11-OT1A0A1B0GTJ5 212 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 SHISA3A0PJX4 238 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 PSMB11A5LHX3 300 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 ZNF729A6NN14 1252 aaPredicted RBP4.55□□□□□ -1.68
USP3-215ENST00000559771 IFITM5A6NNB3 132 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 OOSP1A8MZH6 123 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 NPIPB11E5RHQ5 1161 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 E9PI62 339 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 J3QR06 171 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 GSTT2BP0CG30 244 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 PRKACBP22694 351 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 S100A1P23297 94 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 PTGFRP43088 359 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 OR3A4PP47883 348 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 KRTAP10-7P60409 375 aaPredicted RBP4.55□□□□□ -1.68
USP3-215ENST00000559771 SSBP1Q04837 148 aaKnown RBP4.55□□□□□ -1.68
USP3-215ENST00000559771 ALKBH1Q13686 389 aaKnown RBP4.55□□□□□ -1.68
USP3-215ENST00000559771 EBI3Q14213 229 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 ATXN7L3Q14CW9 347 aaPredicted RBP4.55□□□□□ -1.68
USP3-215ENST00000559771 TATDN3Q17R31 274 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 C9orf152Q5JTZ5 239 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 KRBOX4Q5JUW0 171 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 ATAD3CQ5T2N8 411 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 TMEM244Q5VVB8 128 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 FAM53AQ6NSI3 398 aaPredicted RBP4.55□□□□□ -1.68
USP3-215ENST00000559771 ZNF529Q6P280 563 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 LHFPL2Q6ZUX7 228 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 SAXO1Q8IYX7 474 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 DRAM1Q8N682 238 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 Q8N6K4 173 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 Q8NFD4 153 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 OR13C9Q8NGT0 318 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 OR56B4Q8NH76 319 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 OR9G1Q8NH87 305 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 OR5AK2Q8NH90 309 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 GRPEL2Q8TAA5 225 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 PLPPR1Q8TBJ4 325 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 GPR148Q8TDV2 347 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 CAPSLQ8WWF8 208 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 TRIM63Q969Q1 353 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 S100A16Q96FQ6 103 aaKnown RBP4.55□□□□□ -1.68
USP3-215ENST00000559771 RAX2Q96IS3 184 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 AKR1E2Q96JD6 320 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 ST6GAL2Q96JF0 529 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 WWC2-AS2Q96NR7 200 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 GON7Q9BXV9 100 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 SLA2Q9H6Q3 261 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 PLSCR3Q9NRY6 295 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 TAS2R8Q9NYW2 309 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 C11orf21Q9P2W6 132 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 PSG11Q9UQ72 335 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 MOB4Q9Y3A3 225 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 V9GY05 133 aa4.55□□□□□ -1.68
USP3-215ENST00000559771 EPPK1P58107 5090 aaKnown RBP4.54□□□□□ -1.68
USP3-215ENST00000559771 TRBV5-7A0A0A0MS05 114 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 A0A0A6YYH2 397 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 A0A1W2PPE3 182 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 C7orf66A4D0T2 115 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 A6NJ64 397 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 INMT-MINDY4F8WBC2 141 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 GABARAPH6UMI1 98 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 TOR1AO14656 332 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 DEGS1O15121 323 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 PRAF2O60831 178 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms