RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 CEACAM6P40199 344 aa13.61□□□□□ -0.23
TPM1-219ENST00000559397 HTD2P86397 168 aa13.61□□□□□ -0.23
TPM1-219ENST00000559397 C9orf62Q8N4C0 152 aa13.61□□□□□ -0.23
TPM1-219ENST00000559397 BVESQ8NE79 360 aa13.61□□□□□ -0.23
TPM1-219ENST00000559397 POLR3KQ9Y2Y1 108 aaPredicted RBP13.61□□□□□ -0.23
TPM1-219ENST00000559397 CELSR1Q9NYQ6 3014 aa13.6□□□□□ -0.23
TPM1-219ENST00000559397 C22orf46C9J442 243 aa13.6□□□□□ -0.23
TPM1-219ENST00000559397 FOXH1O75593 365 aa13.6□□□□□ -0.23
TPM1-219ENST00000559397 OR5AC1P0C628 307 aa13.6□□□□□ -0.23
TPM1-219ENST00000559397 LUMP51884 338 aaPredicted RBP13.6□□□□□ -0.23
TPM1-219ENST00000559397 LRTM2Q8N967 370 aa13.6□□□□□ -0.23
TPM1-219ENST00000559397 ARL11Q969Q4 196 aa13.6□□□□□ -0.23
TPM1-219ENST00000559397 PARP12Q9H0J9 701 aaKnown RBP13.6□□□□□ -0.23
TPM1-219ENST00000559397 OR6C3Q9NZP0 311 aa13.6□□□□□ -0.23
TPM1-219ENST00000559397 BOLA1Q9Y3E2 137 aa13.6□□□□□ -0.23
TPM1-219ENST00000559397 SPINT2O43291 252 aa13.59□□□□□ -0.23
TPM1-219ENST00000559397 SSTR5P35346 364 aa13.59□□□□□ -0.23
TPM1-219ENST00000559397 EDDM3BP56851 147 aa13.59□□□□□ -0.23
TPM1-219ENST00000559397 LCN2P80188 198 aa13.59□□□□□ -0.23
TPM1-219ENST00000559397 PAX2Q02962 417 aa13.59□□□□□ -0.23
TPM1-219ENST00000559397 TMEM249Q2WGJ8 235 aa13.59□□□□□ -0.23
TPM1-219ENST00000559397 SPNS3Q6ZMD2 512 aa13.59□□□□□ -0.23
TPM1-219ENST00000559397 LY6G5BQ8NDX9 201 aa13.59□□□□□ -0.23
TPM1-219ENST00000559397 C8orf46Q8TAG6 207 aa13.59□□□□□ -0.23
TPM1-219ENST00000559397 GLYATL2Q8WU03 294 aa13.59□□□□□ -0.23
TPM1-219ENST00000559397 MSI2Q96DH6 328 aaKnown RBP13.59□□□□□ -0.23
TPM1-219ENST00000559397 PLSCR3Q9NRY6 295 aa13.59□□□□□ -0.23
TPM1-219ENST00000559397 C19orf12Q9NSK7 152 aa13.59□□□□□ -0.23
TPM1-219ENST00000559397 LOC105371242A0A075B767 164 aa13.59□□□□□ -0.23
TPM1-219ENST00000559397 TRBV23-1A0A0A0MS06 115 aa13.59□□□□□ -0.23
TPM1-219ENST00000559397 HSD17B6O14756 317 aa13.59□□□□□ -0.23
TPM1-219ENST00000559397 ADAP1O75689 374 aa13.59□□□□□ -0.23
TPM1-219ENST00000559397 IGLV2-14P01704 120 aa13.59□□□□□ -0.23
TPM1-219ENST00000559397 SP6Q3SY56 376 aa13.59□□□□□ -0.23
TPM1-219ENST00000559397 GSG1LQ6UXU4 331 aa13.59□□□□□ -0.23
TPM1-219ENST00000559397 LIAT1Q6ZQX7 453 aa13.59□□□□□ -0.23
TPM1-219ENST00000559397 TCF23Q7RTU1 214 aa13.59□□□□□ -0.23
TPM1-219ENST00000559397 TBC1D26Q86UD7 250 aa13.59□□□□□ -0.23
TPM1-219ENST00000559397 CMTM1Q8IZ96 169 aa13.59□□□□□ -0.23
TPM1-219ENST00000559397 OR52L2PQ8NGH6 319 aa13.59□□□□□ -0.23
TPM1-219ENST00000559397 H1FXQ92522 213 aaKnown RBP13.59□□□□□ -0.23
TPM1-219ENST00000559397 SEC22AQ96IW7 307 aa13.59□□□□□ -0.23
TPM1-219ENST00000559397 AKR1E2Q96JD6 320 aa13.59□□□□□ -0.23
TPM1-219ENST00000559397 RPUSD1Q9UJJ7 312 aaKnown RBP13.59□□□□□ -0.23
TPM1-219ENST00000559397 ZANQ9Y493 2812 aa13.58□□□□□ -0.24
TPM1-219ENST00000559397 TRAV14DV4A0A0A6YYC5 116 aa13.58□□□□□ -0.24
TPM1-219ENST00000559397 C3orf85A0A1B0GTC6 90 aa13.58□□□□□ -0.24
TPM1-219ENST00000559397 F2RL2O00254 374 aa13.58□□□□□ -0.24
TPM1-219ENST00000559397 PGLYRP1O75594 196 aaPredicted RBP13.58□□□□□ -0.24
TPM1-219ENST00000559397 IGHV4-31P0DP07 118 aa13.58□□□□□ -0.24
TPM1-219ENST00000559397 RPL31P62899 125 aaKnown RBP13.58□□□□□ -0.24
TPM1-219ENST00000559397 GNMTQ14749 295 aa13.58□□□□□ -0.24
TPM1-219ENST00000559397 CORO2AQ92828 525 aa13.58□□□□□ -0.24
TPM1-219ENST00000559397 TP53RKQ96S44 253 aa13.58□□□□□ -0.24
TPM1-219ENST00000559397 NMES1Q9C002 83 aa13.58□□□□□ -0.24
TPM1-219ENST00000559397 MMP26Q9NRE1 261 aa13.58□□□□□ -0.24
TPM1-219ENST00000559397 FLNAP21333 2647 aaKnown RBP13.58□□□□□ -0.24
TPM1-219ENST00000559397 C5orf51A6NDU8 294 aa13.57□□□□□ -0.24
TPM1-219ENST00000559397 HMSDA8MTL9 139 aa13.57□□□□□ -0.24
TPM1-219ENST00000559397 B4DSR2 109 aa13.57□□□□□ -0.24
TPM1-219ENST00000559397 OR8U9P0C7N5 309 aa13.57□□□□□ -0.24
TPM1-219ENST00000559397 CYCSP99999 105 aaKnown RBP13.57□□□□□ -0.24
TPM1-219ENST00000559397 MEF2CQ06413 473 aaPredicted RBP13.57□□□□□ -0.24
TPM1-219ENST00000559397 MSMO1Q15800 293 aa13.57□□□□□ -0.24
TPM1-219ENST00000559397 TMEM200BQ69YZ2 307 aa13.57□□□□□ -0.24
TPM1-219ENST00000559397 LINC01356Q8N9X3 169 aa13.57□□□□□ -0.24
TPM1-219ENST00000559397 OR8U1Q8NH10 309 aa13.57□□□□□ -0.24
TPM1-219ENST00000559397 GRPEL2Q8TAA5 225 aa13.57□□□□□ -0.24
TPM1-219ENST00000559397 RFESDQ8TAC1 157 aa13.57□□□□□ -0.24
TPM1-219ENST00000559397 C18orf12Q96KH6 178 aa13.57□□□□□ -0.24
TPM1-219ENST00000559397 PDCD10Q9BUL8 212 aa13.57□□□□□ -0.24
TPM1-219ENST00000559397 TMEM222Q9H0R3 208 aa13.57□□□□□ -0.24
TPM1-219ENST00000559397 LINC00574Q9H8X3 128 aa13.57□□□□□ -0.24
TPM1-219ENST00000559397 LPAR2Q9HBW0 351 aa13.57□□□□□ -0.24
TPM1-219ENST00000559397 OR2S2Q9NQN1 319 aa13.57□□□□□ -0.24
TPM1-219ENST00000559397 HSPB11Q9Y547 144 aa13.57□□□□□ -0.24
TPM1-219ENST00000559397 CREBBPQ92793 2442 aa13.57□□□□□ -0.24
TPM1-219ENST00000559397 MPTX1A8MV57 137 aa13.56□□□□□ -0.24
TPM1-219ENST00000559397 FAM25EA8MYX2 175 aa13.56□□□□□ -0.24
TPM1-219ENST00000559397 SMAD7O15105 426 aaKnown RBP13.56□□□□□ -0.24
TPM1-219ENST00000559397 MSMBP08118 114 aa13.56□□□□□ -0.24
TPM1-219ENST00000559397 HOXB5P09067 269 aa13.56□□□□□ -0.24
TPM1-219ENST00000559397 SRPXP78539 464 aa13.56□□□□□ -0.24
TPM1-219ENST00000559397 IFITM2Q01629 132 aa13.56□□□□□ -0.24
TPM1-219ENST00000559397 FGL1Q08830 312 aa13.56□□□□□ -0.24
TPM1-219ENST00000559397 IL15RAQ13261 267 aa13.56□□□□□ -0.24
TPM1-219ENST00000559397 ZNF273Q14593 569 aa13.56□□□□□ -0.24
TPM1-219ENST00000559397 C17orf58Q2M2W7 97 aa13.56□□□□□ -0.24
TPM1-219ENST00000559397 LGALSLQ3ZCW2 172 aaPredicted RBP13.56□□□□□ -0.24
TPM1-219ENST00000559397 FAM53AQ6NSI3 398 aaPredicted RBP13.56□□□□□ -0.24
TPM1-219ENST00000559397 LGI3Q8N145 548 aa13.56□□□□□ -0.24
TPM1-219ENST00000559397 ZBTB8BQ8NAP8 495 aaPredicted RBP13.56□□□□□ -0.24
TPM1-219ENST00000559397 FAM216AQ8WUB2 273 aa13.56□□□□□ -0.24
TPM1-219ENST00000559397 TMEM56Q96MV1 263 aa13.56□□□□□ -0.24
TPM1-219ENST00000559397 METTL8Q9H825 291 aaKnown RBP13.56□□□□□ -0.24
TPM1-219ENST00000559397 RAB9BQ9NP90 201 aa13.56□□□□□ -0.24
TPM1-219ENST00000559397 CALYQ9NYX4 217 aa13.56□□□□□ -0.24
TPM1-219ENST00000559397 JPT1Q9UK76 154 aa13.56□□□□□ -0.24
TPM1-219ENST00000559397 TMEM56-RWDD3S4R434 201 aa13.56□□□□□ -0.24
TPM1-219ENST00000559397 PPIAL4CA0A0B4J2A2 164 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms