RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 SCTP09683 121 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 CTXN2P0C2S0 81 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 SAA2P0DJI9 122 aaPredicted RBP3.48□□□□□ -1.85
SNX1-205ENST00000559339 OR5H8P0DN80 308 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 PF4V1P10720 104 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 SLC2A2P11168 524 aaPredicted RBP3.48□□□□□ -1.85
SNX1-205ENST00000559339 VDAC1P21796 283 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 DTYMKP23919 212 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 SOX6P35712 828 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 GPR12P47775 334 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 TMEM50BP56557 158 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 GNG2P59768 71 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 KRTAP10-3P60369 221 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 HLA-DRB3P79483 266 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 MXD1Q05195 221 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 CBX3Q13185 183 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 LSAMPQ13449 338 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 EBI3Q14213 229 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 GNMTQ14749 295 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 PLGLAQ15195 96 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 SRSF7Q16629 238 aaKnown RBP eCLIP3.48□□□□□ -1.85
SNX1-205ENST00000559339 NSUN5P1Q3KNT7 163 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 CDNFQ49AH0 187 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 KHDC1LQ5JSQ8 128 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 IDNKQ5T6J7 187 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 HACD4Q5VWC8 232 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 ZNF880Q6PDB4 577 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 TEX38Q6PEX7 206 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 COMMD1Q8N668 190 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 ZNF439Q8NDP4 499 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 OR4A4PQ8NGN8 299 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 FAM110DQ8TAY7 271 aaPredicted RBP3.48□□□□□ -1.85
SNX1-205ENST00000559339 R3HDM4Q96D70 268 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 S100A16Q96FQ6 103 aaKnown RBP3.48□□□□□ -1.85
SNX1-205ENST00000559339 CITED2Q99967 270 aaPredicted RBP3.48□□□□□ -1.85
SNX1-205ENST00000559339 AGMATQ9BSE5 352 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 HDHD3Q9BSH5 251 aaPredicted RBP3.48□□□□□ -1.85
SNX1-205ENST00000559339 ST6GALNAC5Q9BVH7 336 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 WNT10AQ9GZT5 417 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 ABCG5Q9H222 651 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 DCSTAMPQ9H295 470 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 DIABLOQ9NR28 239 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 RDH8Q9NYR8 311 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 KCNK7Q9Y2U2 307 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 TSSC4Q9Y5U2 329 aaPredicted RBP3.48□□□□□ -1.85
SNX1-205ENST00000559339 ETV7Q9Y603 341 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 DSCAML1Q8TD84 2053 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 A0A0A6YYH2 397 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 A0A0B4J203 849 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 SMIM31A0A1B0GVY4 71 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 A0A1W2PRX2 142 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 SMIM30A4D0T7 59 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 A6NJ64 397 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 SH2D7A6NKC9 451 aaPredicted RBP3.47□□□□□ -1.85
SNX1-205ENST00000559339 FOXI3A8MTJ6 420 aaPredicted RBP3.47□□□□□ -1.85
SNX1-205ENST00000559339 MFNGO00587 321 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 NBR2O15453 112 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 RBBP9O75884 186 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 IGHG2P01859 326 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 APOA2P02652 100 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 PF4P02776 101 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 AMY1AP04745 511 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 AMY2AP04746 511 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 OR8U9P0C7N5 309 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 GSTT2P0CG29 244 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 GSTT2BP0CG30 244 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 CD28P10747 220 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 SNRPBP14678 240 aaKnown RBP3.47□□□□□ -1.85
SNX1-205ENST00000559339 CD40LGP29965 261 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 SLC6A1P30531 599 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 OR3A3P47888 321 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 ARPC4P59998 168 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 ACTBP60709 375 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 CD83Q01151 205 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 TAGLNQ01995 201 aaKnown RBP3.47□□□□□ -1.85
SNX1-205ENST00000559339 PNLIPRP3Q17RR3 467 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 TMEM95Q3KNT9 176 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 MOGAT2Q3SYC2 334 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 RPL39P5Q59GN2 51 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 LIN54Q6MZP7 749 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 FAM53AQ6NSI3 398 aaPredicted RBP3.47□□□□□ -1.85
SNX1-205ENST00000559339 TMEM65Q6PI78 240 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 Q6ZS46 218 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 ZNF833PQ6ZTB9 187 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 NR2C2APQ86WQ0 139 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 ODF3L1Q8IXM7 274 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 STPG2Q8N412 459 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 FAM71E2Q8N5Q1 922 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 Q8N9W7 124 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.47□□□□□ -1.85
SNX1-205ENST00000559339 OR8U1Q8NH10 309 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 LGALS14Q8TCE9 139 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 FLYWCH2Q96CP2 140 aaKnown RBP3.47□□□□□ -1.85
SNX1-205ENST00000559339 RNF5Q99942 180 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 MRPL20Q9BYC9 149 aaKnown RBP3.47□□□□□ -1.85
SNX1-205ENST00000559339 C11orf54Q9H0W9 315 aaPredicted RBP3.47□□□□□ -1.85
SNX1-205ENST00000559339 IFI27L2Q9H2X8 130 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.47□□□□□ -1.85
SNX1-205ENST00000559339 ZFP57Q9NU63 452 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 RHBDL2Q9NX52 303 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms