RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 FAM90A26D6RGX4 464 aa13.96□□□□□ -0.17
SPG11-215ENST00000559193 SOD3P08294 240 aa13.96□□□□□ -0.17
SPG11-215ENST00000559193 CEBPDP49716 269 aaPredicted RBP13.96□□□□□ -0.17
SPG11-215ENST00000559193 PPP1CBP62140 327 aa13.96□□□□□ -0.17
SPG11-215ENST00000559193 OR8G2PQ6IF36 304 aa13.96□□□□□ -0.17
SPG11-215ENST00000559193 LURAP1LQ8IV03 231 aa13.96□□□□□ -0.17
SPG11-215ENST00000559193 ABHD5Q8WTS1 349 aa13.96□□□□□ -0.17
SPG11-215ENST00000559193 FRZBQ92765 325 aa13.96□□□□□ -0.17
SPG11-215ENST00000559193 KLF13Q9Y2Y9 288 aaPredicted RBP13.96□□□□□ -0.17
SPG11-215ENST00000559193 DMRT1Q9Y5R6 373 aa13.96□□□□□ -0.17
SPG11-215ENST00000559193 MUC3AQ02505 3323 aa13.96□□□□□ -0.17
SPG11-215ENST00000559193 SEC14L6B5MCN3 397 aa13.96□□□□□ -0.17
SPG11-215ENST00000559193 RAMP3O60896 148 aa13.96□□□□□ -0.17
SPG11-215ENST00000559193 TRGC1P0CF51 173 aa13.96□□□□□ -0.17
SPG11-215ENST00000559193 SELEP16581 610 aa13.96□□□□□ -0.17
SPG11-215ENST00000559193 NKX6-1P78426 367 aaPredicted RBP13.96□□□□□ -0.17
SPG11-215ENST00000559193 TNFRSF9Q07011 255 aa13.96□□□□□ -0.17
SPG11-215ENST00000559193 WDR25Q64LD2 544 aaPredicted RBP13.96□□□□□ -0.17
SPG11-215ENST00000559193 HIST3H2BBQ8N257 126 aa13.96□□□□□ -0.17
SPG11-215ENST00000559193 RPP25LQ8N5L8 163 aaKnown RBP13.96□□□□□ -0.17
SPG11-215ENST00000559193 WDYHV1Q96HA8 205 aa13.96□□□□□ -0.17
SPG11-215ENST00000559193 DEFB127Q9H1M4 99 aa13.96□□□□□ -0.17
SPG11-215ENST00000559193 IL17BQ9UHF5 180 aa13.96□□□□□ -0.17
SPG11-215ENST00000559193 SH2D1BO14796 132 aa13.95□□□□□ -0.18
SPG11-215ENST00000559193 CLDN1O95832 211 aa13.95□□□□□ -0.18
SPG11-215ENST00000559193 SLC10A1Q14973 349 aa13.95□□□□□ -0.18
SPG11-215ENST00000559193 FAM53AQ6NSI3 398 aaPredicted RBP13.95□□□□□ -0.18
SPG11-215ENST00000559193 OR1L1Q8NH94 360 aa13.95□□□□□ -0.18
SPG11-215ENST00000559193 SPRR3Q9UBC9 169 aa13.95□□□□□ -0.18
SPG11-215ENST00000559193 RNF212BA8MTL3 300 aa13.95□□□□□ -0.18
SPG11-215ENST00000559193 J3QW42 95 aa13.95□□□□□ -0.18
SPG11-215ENST00000559193 PHOX2AO14813 284 aa13.95□□□□□ -0.18
SPG11-215ENST00000559193 PSPNO60542 156 aa13.95□□□□□ -0.18
SPG11-215ENST00000559193 P0C879 139 aa13.95□□□□□ -0.18
SPG11-215ENST00000559193 RD3LP0DJH9 198 aa13.95□□□□□ -0.18
SPG11-215ENST00000559193 RPL30P62888 115 aaKnown RBP13.95□□□□□ -0.18
SPG11-215ENST00000559193 OR2B11Q5JQS5 317 aa13.95□□□□□ -0.18
SPG11-215ENST00000559193 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.95□□□□□ -0.18
SPG11-215ENST00000559193 GPR61Q9BZJ8 451 aa13.95□□□□□ -0.18
SPG11-215ENST00000559193 HSPB7Q9UBY9 170 aa13.95□□□□□ -0.18
SPG11-215ENST00000559193 CHD3Q12873 2000 aaKnown RBP13.95□□□□□ -0.18
SPG11-215ENST00000559193 PPP1R2P9O14990 202 aa13.94□□□□□ -0.18
SPG11-215ENST00000559193 ZNF737O75373 536 aa13.94□□□□□ -0.18
SPG11-215ENST00000559193 IFNA1P01562 189 aa13.94□□□□□ -0.18
SPG11-215ENST00000559193 ZNF883P0CG24 379 aa13.94□□□□□ -0.18
SPG11-215ENST00000559193 CD81P60033 236 aa13.94□□□□□ -0.18
SPG11-215ENST00000559193 HNF4GQ14541 408 aa13.94□□□□□ -0.18
SPG11-215ENST00000559193 PDZD11Q5EBL8 140 aa13.94□□□□□ -0.18
SPG11-215ENST00000559193 ACSM6Q6P461 480 aa13.94□□□□□ -0.18
SPG11-215ENST00000559193 ZNF645Q8N7E2 425 aa13.94□□□□□ -0.18
SPG11-215ENST00000559193 OR10D4PQ8NGN7 298 aa13.94□□□□□ -0.18
SPG11-215ENST00000559193 LHX4Q969G2 390 aa13.94□□□□□ -0.18
SPG11-215ENST00000559193 TIMM9Q9Y5J7 89 aa13.94□□□□□ -0.18
SPG11-215ENST00000559193 KLRC4-KLRK1H3BQV0 150 aa13.94□□□□□ -0.18
SPG11-215ENST00000559193 HAND1O96004 215 aa13.94□□□□□ -0.18
SPG11-215ENST00000559193 G6PCP35575 357 aa13.94□□□□□ -0.18
SPG11-215ENST00000559193 IDH3GP51553 393 aaPredicted RBP13.94□□□□□ -0.18
SPG11-215ENST00000559193 PMS2P11Q13670 270 aa13.94□□□□□ -0.18
SPG11-215ENST00000559193 ZNF766Q5HY98 468 aa13.94□□□□□ -0.18
SPG11-215ENST00000559193 SLC25A40Q8TBP6 338 aa13.94□□□□□ -0.18
SPG11-215ENST00000559193 OR2D2Q9H210 308 aa13.94□□□□□ -0.18
SPG11-215ENST00000559193 TRBV24-1A0A075B6N3 115 aa13.93□□□□□ -0.18
SPG11-215ENST00000559193 ELOA3CA0A087WX78 387 aaPredicted RBP13.93□□□□□ -0.18
SPG11-215ENST00000559193 GRPP07492 148 aa13.93□□□□□ -0.18
SPG11-215ENST00000559193 CD55P08174 381 aa13.93□□□□□ -0.18
SPG11-215ENST00000559193 OR3A1P47881 315 aa13.93□□□□□ -0.18
SPG11-215ENST00000559193 EIF4EBP1Q13541 118 aaPredicted RBP13.93□□□□□ -0.18
SPG11-215ENST00000559193 RNFT1Q5M7Z0 435 aa13.93□□□□□ -0.18
SPG11-215ENST00000559193 LINC00469Q8N7U9 141 aa13.93□□□□□ -0.18
SPG11-215ENST00000559193 SLC39A9Q9NUM3 307 aa13.93□□□□□ -0.18
SPG11-215ENST00000559193 MED13Q9UHV7 2174 aa13.93□□□□□ -0.18
SPG11-215ENST00000559193 C12orf77C9JDV5 145 aa13.93□□□□□ -0.18
SPG11-215ENST00000559193 KRASP01116 189 aa13.93□□□□□ -0.18
SPG11-215ENST00000559193 MPLP40238 635 aa13.93□□□□□ -0.18
SPG11-215ENST00000559193 HOXA4Q00056 320 aaPredicted RBP13.93□□□□□ -0.18
SPG11-215ENST00000559193 ZNF816Q0VGE8 651 aaPredicted RBP13.93□□□□□ -0.18
SPG11-215ENST00000559193 CENPVQ7Z7K6 275 aaPredicted RBP13.93□□□□□ -0.18
SPG11-215ENST00000559193 ZNF808Q8N4W9 903 aaPredicted RBP13.93□□□□□ -0.18
SPG11-215ENST00000559193 CDH20Q9HBT6 801 aa13.93□□□□□ -0.18
SPG11-215ENST00000559193 FAM186AA6NE01 2351 aa13.93□□□□□ -0.18
SPG11-215ENST00000559193 TMEM30CPA0ZSE6 113 aa13.92□□□□□ -0.18
SPG11-215ENST00000559193 ODAMA1E959 279 aa13.92□□□□□ -0.18
SPG11-215ENST00000559193 OPN1MWP04001 364 aa13.92□□□□□ -0.18
SPG11-215ENST00000559193 OPN1MW2P0DN77 364 aa13.92□□□□□ -0.18
SPG11-215ENST00000559193 OPN1MW3P0DN78 364 aa13.92□□□□□ -0.18
SPG11-215ENST00000559193 MEF2BQ02080 365 aaPredicted RBP13.92□□□□□ -0.18
SPG11-215ENST00000559193 PSG7Q13046 419 aa13.92□□□□□ -0.18
SPG11-215ENST00000559193 C4orf17Q53FE4 359 aa13.92□□□□□ -0.18
SPG11-215ENST00000559193 ZNF383Q8NA42 475 aa13.92□□□□□ -0.18
SPG11-215ENST00000559193 OR52L2PQ8NGH6 319 aa13.92□□□□□ -0.18
SPG11-215ENST00000559193 AGMATQ9BSE5 352 aa13.92□□□□□ -0.18
SPG11-215ENST00000559193 CTDSP1Q9GZU7 261 aa13.92□□□□□ -0.18
SPG11-215ENST00000559193 ARRDC1-AS1Q9H2J1 176 aa13.92□□□□□ -0.18
SPG11-215ENST00000559193 HES4Q9HCC6 221 aa13.92□□□□□ -0.18
SPG11-215ENST00000559193 CLN8Q9UBY8 286 aa13.92□□□□□ -0.18
SPG11-215ENST00000559193 ZDBF2Q9HCK1 2354 aa13.92□□□□□ -0.18
SPG11-215ENST00000559193 IQCF6A8MYZ5 107 aa13.92□□□□□ -0.18
SPG11-215ENST00000559193 HMGB3O15347 200 aaKnown RBP13.92□□□□□ -0.18
SPG11-215ENST00000559193 S1PR2O95136 353 aa13.92□□□□□ -0.18
SPG11-215ENST00000559193 BRWD1-AS2P59051 145 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms