RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 PPP1R14BQ96C90 147 aa1.15□□□□□ -2.23
VPS13C-207ENST00000558919 PPCDCQ96CD2 204 aa1.15□□□□□ -2.23
VPS13C-207ENST00000558919 DHRS9Q9BPW9 319 aa1.15□□□□□ -2.23
VPS13C-207ENST00000558919 MRPS26Q9BYN8 205 aaKnown RBP1.15□□□□□ -2.23
VPS13C-207ENST00000558919 BCL2L14Q9BZR8 327 aa1.15□□□□□ -2.23
VPS13C-207ENST00000558919 OR51B6Q9H340 312 aa1.15□□□□□ -2.23
VPS13C-207ENST00000558919 UCK1Q9HA47 277 aa1.15□□□□□ -2.23
VPS13C-207ENST00000558919 KCNIP2Q9NS61 270 aa1.15□□□□□ -2.23
VPS13C-207ENST00000558919 SLC23A2Q9UGH3 650 aa1.15□□□□□ -2.23
VPS13C-207ENST00000558919 PHLDA3Q9Y5J5 127 aa1.15□□□□□ -2.23
VPS13C-207ENST00000558919 OTOFQ9HC10 1997 aa1.15□□□□□ -2.23
VPS13C-207ENST00000558919 SHANK3Q9BYB0 1731 aa1.15□□□□□ -2.23
VPS13C-207ENST00000558919 PTPRKQ15262 1439 aa1.15□□□□□ -2.23
VPS13C-207ENST00000558919 DSCAML1Q8TD84 2053 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 KMT2EQ8IZD2 1858 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 B4DEV8 164 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 GOLGA6L19H0YKK7 550 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 H3BSA7 217 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 M0QYV0 167 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 COPEO14579 308 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 EEF1E1O43324 174 aaKnown RBP1.14□□□□□ -2.23
VPS13C-207ENST00000558919 TYMSP04818 313 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 C8orf88P0DMB2 117 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 CTSEP14091 401 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 NQO1P15559 274 aaKnown RBP1.14□□□□□ -2.23
VPS13C-207ENST00000558919 PSMA1P25786 263 aaKnown RBP1.14□□□□□ -2.23
VPS13C-207ENST00000558919 CEBPGP53567 150 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 AP2S1P53680 142 aaPredicted RBP1.14□□□□□ -2.23
VPS13C-207ENST00000558919 H2BFSP57053 126 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 GABARAPL2P60520 117 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 DAD1P61803 113 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 LRRC26Q2I0M4 334 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 RGS21Q2M5E4 152 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 SPIN4Q56A73 249 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 HES3Q5TGS1 186 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 LPCAT4Q643R3 524 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 TNFAIP8L2Q6P589 184 aaPredicted RBP1.14□□□□□ -2.23
VPS13C-207ENST00000558919 LRRN1Q6UXK5 716 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 SCGB1D4Q6XE38 83 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 VN1R4Q7Z5H5 301 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 ZNF565Q8N9K5 539 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 OR11G2Q8NGC1 345 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 OR8J2Q8NGG1 315 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 OR8K1Q8NGG5 319 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 OR9I1Q8NGQ6 314 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 SLC37A2Q8TED4 501 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 ASB13Q8WXK3 278 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 ITFG2Q969R8 447 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 TESCQ96BS2 214 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 GALMQ96C23 342 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 TLCD1Q96CP7 247 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 C8orf76Q96K31 380 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 OR8B2Q96RD0 313 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 PAIP2Q9BPZ3 127 aaKnown RBP1.14□□□□□ -2.23
VPS13C-207ENST00000558919 TIPINQ9BVW5 301 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 CDCA4Q9BXL8 241 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 MROQ9BYG7 248 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 EIF5A2Q9GZV4 153 aaKnown RBP1.14□□□□□ -2.23
VPS13C-207ENST00000558919 MS4A6AQ9H2W1 248 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 ZNF286AQ9HBT8 521 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 UBQLN4Q9NRR5 601 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 PARVAQ9NVD7 372 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 BABAM2Q9NXR7 383 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 LINC00527Q9UJ94 153 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 VPREB3Q9UKI3 123 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 TRPM3Q9HCF6 1732 aaPredicted RBP1.14□□□□□ -2.23
VPS13C-207ENST00000558919 CLUHO75153 1309 aa1.14□□□□□ -2.23
VPS13C-207ENST00000558919 ABCC11Q96J66 1382 aa1.13□□□□□ -2.23
VPS13C-207ENST00000558919 TEX50A0A1B0GTY4 177 aa1.13□□□□□ -2.23
VPS13C-207ENST00000558919 G3V3Q6 166 aa1.13□□□□□ -2.23
VPS13C-207ENST00000558919 K7EQS6 105 aa1.13□□□□□ -2.23
VPS13C-207ENST00000558919 M0R036 132 aa1.13□□□□□ -2.23
VPS13C-207ENST00000558919 CXCR6O00574 342 aa1.13□□□□□ -2.23
VPS13C-207ENST00000558919 IFNA5P01569 189 aa1.13□□□□□ -2.23
VPS13C-207ENST00000558919 ISG15P05161 165 aa1.13□□□□□ -2.23
VPS13C-207ENST00000558919 CALB1P05937 261 aa1.13□□□□□ -2.23
VPS13C-207ENST00000558919 FBP1P09467 338 aa1.13□□□□□ -2.23
VPS13C-207ENST00000558919 OR12D1P0DN82 309 aa1.13□□□□□ -2.23
VPS13C-207ENST00000558919 ZNF22P17026 224 aaPredicted RBP1.13□□□□□ -2.23
VPS13C-207ENST00000558919 CRABP1P29762 137 aa1.13□□□□□ -2.23
VPS13C-207ENST00000558919 MIPP30301 263 aa1.13□□□□□ -2.23
VPS13C-207ENST00000558919 MRPS15P82914 257 aaKnown RBP1.13□□□□□ -2.23
VPS13C-207ENST00000558919 HPCAP84074 193 aa1.13□□□□□ -2.23
VPS13C-207ENST00000558919 PPP1R1AQ13522 171 aa1.13□□□□□ -2.23
VPS13C-207ENST00000558919 OR8G1Q15617 311 aa1.13□□□□□ -2.23
VPS13C-207ENST00000558919 CST6Q15828 149 aa1.13□□□□□ -2.23
VPS13C-207ENST00000558919 UAP1Q16222 522 aaPredicted RBP1.13□□□□□ -2.23
VPS13C-207ENST00000558919 MAPK14Q16539 360 aa1.13□□□□□ -2.23
VPS13C-207ENST00000558919 TRMT12Q53H54 448 aaKnown RBP1.13□□□□□ -2.23
VPS13C-207ENST00000558919 SPATA31B1PQ5VZV4 182 aa1.13□□□□□ -2.23
VPS13C-207ENST00000558919 NOXRED1Q6NXP6 359 aa1.13□□□□□ -2.23
VPS13C-207ENST00000558919 SLC51BQ86UW2 128 aa1.13□□□□□ -2.23
VPS13C-207ENST00000558919 DOLPP1Q86YN1 238 aa1.13□□□□□ -2.23
VPS13C-207ENST00000558919 C10orf67Q8IYJ2 551 aa1.13□□□□□ -2.23
VPS13C-207ENST00000558919 NATD1Q8N6N6 113 aa1.13□□□□□ -2.23
VPS13C-207ENST00000558919 CCDC112Q8NEF3 446 aa1.13□□□□□ -2.23
VPS13C-207ENST00000558919 OR10D4PQ8NGN7 298 aa1.13□□□□□ -2.23
VPS13C-207ENST00000558919 OR10D3Q8NH80 312 aa1.13□□□□□ -2.23
VPS13C-207ENST00000558919 ZNRF2Q8NHG8 242 aa1.13□□□□□ -2.23
VPS13C-207ENST00000558919 TNFAIP8L1Q8WVP5 186 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms