RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 OR51J1Q9H342 316 aa7.43□□□□□ -1.22
SPG11-212ENST00000558790 IL36GQ9NZH8 169 aa7.43□□□□□ -1.22
SPG11-212ENST00000558790 HERC1Q15751 4861 aa7.43□□□□□ -1.22
SPG11-212ENST00000558790 IGHV4OR15-8A0A075B7B6 117 aa7.42□□□□□ -1.22
SPG11-212ENST00000558790 A0A087WW49 117 aa7.42□□□□□ -1.22
SPG11-212ENST00000558790 TRAV41A0A0B4J266 112 aa7.42□□□□□ -1.22
SPG11-212ENST00000558790 A0A1W2PP11 408 aa7.42□□□□□ -1.22
SPG11-212ENST00000558790 FAM90A10PA6NDY2 464 aa7.42□□□□□ -1.22
SPG11-212ENST00000558790 SAC3D1A6NKF1 404 aa7.42□□□□□ -1.22
SPG11-212ENST00000558790 MAGEB3O15480 346 aa7.42□□□□□ -1.22
SPG11-212ENST00000558790 SOX15O60248 233 aa7.42□□□□□ -1.22
SPG11-212ENST00000558790 HLA-DRB1P01911 266 aa7.42□□□□□ -1.22
SPG11-212ENST00000558790 IGHV4-30-4P0DP06 118 aa7.42□□□□□ -1.22
SPG11-212ENST00000558790 RAB9AP51151 201 aa7.42□□□□□ -1.22
SPG11-212ENST00000558790 ACTBP60709 375 aa7.42□□□□□ -1.22
SPG11-212ENST00000558790 ECSCRQ19T08 205 aa7.42□□□□□ -1.22
SPG11-212ENST00000558790 MPV17LQ2QL34 196 aa7.42□□□□□ -1.22
SPG11-212ENST00000558790 ATAD3CQ5T2N8 411 aa7.42□□□□□ -1.22
SPG11-212ENST00000558790 ACSM6Q6P461 480 aa7.42□□□□□ -1.22
SPG11-212ENST00000558790 LINC00596Q86U02 117 aa7.42□□□□□ -1.22
SPG11-212ENST00000558790 SYS1Q8N2H4 156 aa7.42□□□□□ -1.22
SPG11-212ENST00000558790 CASTOR1Q8WTX7 329 aa7.42□□□□□ -1.22
SPG11-212ENST00000558790 RITA1Q96K30 269 aa7.42□□□□□ -1.22
SPG11-212ENST00000558790 CHCHD6Q9BRQ6 235 aa7.42□□□□□ -1.22
SPG11-212ENST00000558790 MRPL20Q9BYC9 149 aaKnown RBP7.42□□□□□ -1.22
SPG11-212ENST00000558790 GNG12Q9UBI6 72 aa7.42□□□□□ -1.22
SPG11-212ENST00000558790 AASSQ9UDR5 926 aa7.42□□□□□ -1.22
SPG11-212ENST00000558790 EXOGQ9Y2C4 368 aaKnown RBP7.42□□□□□ -1.22
SPG11-212ENST00000558790 FBXO7Q9Y3I1 522 aa7.42□□□□□ -1.22
SPG11-212ENST00000558790 MAGEA13PA6NCF6 341 aa7.41□□□□□ -1.22
SPG11-212ENST00000558790 LINC01619G3V211 115 aa7.41□□□□□ -1.22
SPG11-212ENST00000558790 LDLRAD4O15165 306 aa7.41□□□□□ -1.22
SPG11-212ENST00000558790 NBR2O15453 112 aa7.41□□□□□ -1.22
SPG11-212ENST00000558790 LANCL1O43813 399 aa7.41□□□□□ -1.22
SPG11-212ENST00000558790 HBZP02008 142 aa7.41□□□□□ -1.22
SPG11-212ENST00000558790 MT-ND4P03905 459 aa7.41□□□□□ -1.22
SPG11-212ENST00000558790 CSTBP04080 98 aaKnown RBP7.41□□□□□ -1.22
SPG11-212ENST00000558790 LGALS1P09382 135 aaKnown RBP7.41□□□□□ -1.22
SPG11-212ENST00000558790 OR8U9P0C7N5 309 aa7.41□□□□□ -1.22
SPG11-212ENST00000558790 FCGR1AP12314 374 aa7.41□□□□□ -1.22
SPG11-212ENST00000558790 SNRPGP62308 76 aaKnown RBP7.41□□□□□ -1.22
SPG11-212ENST00000558790 GNMTQ14749 295 aa7.41□□□□□ -1.22
SPG11-212ENST00000558790 C5orf64Q2M2E5 130 aa7.41□□□□□ -1.22
SPG11-212ENST00000558790 SLC25A30Q5SVS4 291 aa7.41□□□□□ -1.22
SPG11-212ENST00000558790 DDI2Q5TDH0 399 aa7.41□□□□□ -1.22
SPG11-212ENST00000558790 MINDY2Q8NBR6 621 aa7.41□□□□□ -1.22
SPG11-212ENST00000558790 OR4K15Q8NH41 348 aa7.41□□□□□ -1.22
SPG11-212ENST00000558790 OR1L1Q8NH94 360 aa7.41□□□□□ -1.22
SPG11-212ENST00000558790 TRUB1Q8WWH5 349 aaKnown RBP7.41□□□□□ -1.22
SPG11-212ENST00000558790 MRPL48Q96GC5 212 aaKnown RBP7.41□□□□□ -1.22
SPG11-212ENST00000558790 CYYR1Q96J86 154 aa7.41□□□□□ -1.22
SPG11-212ENST00000558790 ANKRD60Q9BZ19 345 aa7.41□□□□□ -1.22
SPG11-212ENST00000558790 TOLLIPQ9H0E2 274 aa7.41□□□□□ -1.22
SPG11-212ENST00000558790 METTL9Q9H1A3 318 aa7.41□□□□□ -1.22
SPG11-212ENST00000558790 RCC2Q9P258 522 aaKnown RBP7.41□□□□□ -1.22
SPG11-212ENST00000558790 ING4Q9UNL4 249 aa7.41□□□□□ -1.22
SPG11-212ENST00000558790 AP4S1Q9Y587 144 aa7.41□□□□□ -1.22
SPG11-212ENST00000558790 A0A1W2PN81 502 aa7.4□□□□□ -1.22
SPG11-212ENST00000558790 RAB27BO00194 218 aa7.4□□□□□ -1.22
SPG11-212ENST00000558790 SPINT2O43291 252 aa7.4□□□□□ -1.22
SPG11-212ENST00000558790 RPSAP08865 295 aaKnown RBP7.4□□□□□ -1.22
SPG11-212ENST00000558790 ZNF93P35789 620 aaPredicted RBP7.4□□□□□ -1.22
SPG11-212ENST00000558790 CHRNA7P36544 502 aa7.4□□□□□ -1.22
SPG11-212ENST00000558790 VEGFCP49767 419 aa7.4□□□□□ -1.22
SPG11-212ENST00000558790 GTF2A1P52655 376 aaPredicted RBP7.4□□□□□ -1.22
SPG11-212ENST00000558790 ADARB1P78563 741 aaKnown RBP7.4□□□□□ -1.22
SPG11-212ENST00000558790 PITPNAQ00169 270 aa7.4□□□□□ -1.22
SPG11-212ENST00000558790 TMEM30BQ3MIR4 351 aa7.4□□□□□ -1.22
SPG11-212ENST00000558790 SLC22A6Q4U2R8 563 aa7.4□□□□□ -1.22
SPG11-212ENST00000558790 SYT6Q5T7P8 510 aaPredicted RBP7.4□□□□□ -1.22
SPG11-212ENST00000558790 MEDAGQ5VYS4 303 aa7.4□□□□□ -1.22
SPG11-212ENST00000558790 XAF1Q6GPH4 301 aa7.4□□□□□ -1.22
SPG11-212ENST00000558790 LYPD6Q86Y78 171 aa7.4□□□□□ -1.22
SPG11-212ENST00000558790 ODF3L1Q8IXM7 274 aa7.4□□□□□ -1.22
SPG11-212ENST00000558790 STX19Q8N4C7 294 aa7.4□□□□□ -1.22
SPG11-212ENST00000558790 TMEM106AQ96A25 262 aa7.4□□□□□ -1.22
SPG11-212ENST00000558790 ORAI1Q96D31 301 aa7.4□□□□□ -1.22
SPG11-212ENST00000558790 CENPNQ96H22 339 aaPredicted RBP7.4□□□□□ -1.22
SPG11-212ENST00000558790 ZNF251Q9BRH9 671 aa7.4□□□□□ -1.22
SPG11-212ENST00000558790 ABHD14AQ9BUJ0 271 aa7.4□□□□□ -1.22
SPG11-212ENST00000558790 GHITMQ9H3K2 345 aa7.4□□□□□ -1.22
SPG11-212ENST00000558790 TMEM138Q9NPI0 162 aa7.4□□□□□ -1.22
SPG11-212ENST00000558790 TRAPPC2LQ9UL33 140 aa7.4□□□□□ -1.22
SPG11-212ENST00000558790 FOXA2Q9Y261 457 aaPredicted RBP7.4□□□□□ -1.22
SPG11-212ENST00000558790 MRPS28Q9Y2Q9 187 aaKnown RBP7.4□□□□□ -1.22
SPG11-212ENST00000558790 PKHD1P08F94 4074 aa7.39□□□□□ -1.23
SPG11-212ENST00000558790 SAA2-SAA4A0A096LPE2 208 aa7.39□□□□□ -1.23
SPG11-212ENST00000558790 EI24O14681 340 aa7.39□□□□□ -1.23
SPG11-212ENST00000558790 HSPA12AO43301 675 aa7.39□□□□□ -1.23
SPG11-212ENST00000558790 NDUFA3O95167 84 aa7.39□□□□□ -1.23
SPG11-212ENST00000558790 IGHV3-11P01762 117 aa7.39□□□□□ -1.23
SPG11-212ENST00000558790 ALPLP05186 524 aa7.39□□□□□ -1.23
SPG11-212ENST00000558790 CD2P06729 351 aa7.39□□□□□ -1.23
SPG11-212ENST00000558790 SAA2P0DJI9 122 aaPredicted RBP7.39□□□□□ -1.23
SPG11-212ENST00000558790 GABRB1P18505 474 aa7.39□□□□□ -1.23
SPG11-212ENST00000558790 RCC1P18754 421 aaPredicted RBP7.39□□□□□ -1.23
SPG11-212ENST00000558790 PPP1CCP36873 323 aaKnown RBP7.39□□□□□ -1.23
SPG11-212ENST00000558790 OR3A3P47888 321 aa7.39□□□□□ -1.23
SPG11-212ENST00000558790 CRIP2P52943 208 aaPredicted RBP7.39□□□□□ -1.23
SPG11-212ENST00000558790 GBX2P52951 348 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms