RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 ACSM6Q6P461 480 aa13.78□□□□□ -0.2
HMBOX1-212ENST00000558662 ZIC4Q8N9L1 334 aa13.78□□□□□ -0.2
HMBOX1-212ENST00000558662 DEFB118Q96PH6 123 aa13.78□□□□□ -0.2
HMBOX1-212ENST00000558662 NUDT22Q9BRQ3 303 aa13.78□□□□□ -0.2
HMBOX1-212ENST00000558662 SLC25A22Q9H936 323 aa13.78□□□□□ -0.2
HMBOX1-212ENST00000558662 TUBG2Q9NRH3 451 aa13.78□□□□□ -0.2
HMBOX1-212ENST00000558662 CCL28Q9NRJ3 127 aa13.78□□□□□ -0.2
HMBOX1-212ENST00000558662 TBL2Q9Y4P3 447 aaKnown RBP13.78□□□□□ -0.2
HMBOX1-212ENST00000558662 HS3ST3A1Q9Y663 406 aa13.78□□□□□ -0.2
HMBOX1-212ENST00000558662 IGKV1-27A0A075B6S5 117 aa13.78□□□□□ -0.2
HMBOX1-212ENST00000558662 CCDC163A0A0D9SF12 145 aa13.78□□□□□ -0.2
HMBOX1-212ENST00000558662 GRIFINA4D1Z8 144 aa13.78□□□□□ -0.2
HMBOX1-212ENST00000558662 DPRXA6NFQ7 191 aa13.78□□□□□ -0.2
HMBOX1-212ENST00000558662 CD1BP29016 333 aa13.78□□□□□ -0.2
HMBOX1-212ENST00000558662 CCL7P80098 99 aa13.78□□□□□ -0.2
HMBOX1-212ENST00000558662 VWC2Q2TAL6 325 aa13.78□□□□□ -0.2
HMBOX1-212ENST00000558662 LRP11Q86VZ4 500 aa13.78□□□□□ -0.2
HMBOX1-212ENST00000558662 OR4P4Q8NGL7 312 aa13.78□□□□□ -0.2
HMBOX1-212ENST00000558662 TMEM54Q969K7 222 aa13.78□□□□□ -0.2
HMBOX1-212ENST00000558662 CST9LQ9H4G1 147 aa13.78□□□□□ -0.2
HMBOX1-212ENST00000558662 CACNG5Q9UF02 275 aa13.78□□□□□ -0.2
HMBOX1-212ENST00000558662 RALGAPA1Q6GYQ0 2036 aa13.77□□□□□ -0.2
HMBOX1-212ENST00000558662 AQP7P3A6NL99 342 aa13.77□□□□□ -0.21
HMBOX1-212ENST00000558662 NPIPB11E5RHQ5 1161 aa13.77□□□□□ -0.21
HMBOX1-212ENST00000558662 LINC00271P0C7V0 271 aa13.77□□□□□ -0.21
HMBOX1-212ENST00000558662 RAC2P15153 192 aa13.77□□□□□ -0.21
HMBOX1-212ENST00000558662 NPPCP23582 126 aa13.77□□□□□ -0.21
HMBOX1-212ENST00000558662 LGALS4P56470 323 aa13.77□□□□□ -0.21
HMBOX1-212ENST00000558662 GNB1P62873 340 aa13.77□□□□□ -0.21
HMBOX1-212ENST00000558662 RSPO1Q2MKA7 263 aaPredicted RBP13.77□□□□□ -0.21
HMBOX1-212ENST00000558662 DCAF12Q5T6F0 453 aa13.77□□□□□ -0.21
HMBOX1-212ENST00000558662 C1orf53Q5VUE5 145 aa13.77□□□□□ -0.21
HMBOX1-212ENST00000558662 Q6ZPA2 131 aa13.77□□□□□ -0.21
HMBOX1-212ENST00000558662 LINC00596Q86U02 117 aa13.77□□□□□ -0.21
HMBOX1-212ENST00000558662 KMT5CQ86Y97 462 aa13.77□□□□□ -0.21
HMBOX1-212ENST00000558662 MUC15Q8N387 334 aa13.77□□□□□ -0.21
HMBOX1-212ENST00000558662 DYRK2Q92630 601 aa13.77□□□□□ -0.21
HMBOX1-212ENST00000558662 SFXN3Q9BWM7 321 aa13.77□□□□□ -0.21
HMBOX1-212ENST00000558662 LIN7CQ9NUP9 197 aaKnown RBP13.77□□□□□ -0.21
HMBOX1-212ENST00000558662 OR2W1Q9Y3N9 320 aa13.77□□□□□ -0.21
HMBOX1-212ENST00000558662 IGKV1D-13A0A0B4J2D9 117 aa13.76□□□□□ -0.21
HMBOX1-212ENST00000558662 IGKV1-12A0A0C4DH73 117 aa13.76□□□□□ -0.21
HMBOX1-212ENST00000558662 A0A0G2JRQ6 117 aa13.76□□□□□ -0.21
HMBOX1-212ENST00000558662 C5orf63A6NC05 138 aa13.76□□□□□ -0.21
HMBOX1-212ENST00000558662 CBY3A6NI87 242 aa13.76□□□□□ -0.21
HMBOX1-212ENST00000558662 FCN1O00602 326 aa13.76□□□□□ -0.21
HMBOX1-212ENST00000558662 IGKV1D-12P01611 117 aa13.76□□□□□ -0.21
HMBOX1-212ENST00000558662 IGKV1-13P0DP09 117 aa13.76□□□□□ -0.21
HMBOX1-212ENST00000558662 CDC34P49427 236 aaPredicted RBP13.76□□□□□ -0.21
HMBOX1-212ENST00000558662 RAET1LQ5VY80 246 aa13.76□□□□□ -0.21
HMBOX1-212ENST00000558662 OR10V1Q8NGI7 309 aa13.76□□□□□ -0.21
HMBOX1-212ENST00000558662 PATE1Q8WXA2 126 aa13.76□□□□□ -0.21
HMBOX1-212ENST00000558662 VWCEQ96DN2 955 aa13.76□□□□□ -0.21
HMBOX1-212ENST00000558662 KLHDC7BQ96G42 594 aa13.76□□□□□ -0.21
HMBOX1-212ENST00000558662 LRFN3Q9BTN0 628 aa13.76□□□□□ -0.21
HMBOX1-212ENST00000558662 QTRT1Q9BXR0 403 aaKnown RBP13.76□□□□□ -0.21
HMBOX1-212ENST00000558662 RNF208Q9H0X6 261 aa13.76□□□□□ -0.21
HMBOX1-212ENST00000558662 CENPFP49454 3210 aa13.76□□□□□ -0.21
HMBOX1-212ENST00000558662 A0A1W2PRS3 328 aa13.76□□□□□ -0.21
HMBOX1-212ENST00000558662 C9JCJ5 164 aa13.76□□□□□ -0.21
HMBOX1-212ENST00000558662 TMEM238C9JI98 176 aa13.76□□□□□ -0.21
HMBOX1-212ENST00000558662 TNFSF11O14788 317 aa13.76□□□□□ -0.21
HMBOX1-212ENST00000558662 RAMP3O60896 148 aa13.76□□□□□ -0.21
HMBOX1-212ENST00000558662 ZNF324O75467 553 aaPredicted RBP13.76□□□□□ -0.21
HMBOX1-212ENST00000558662 CRYGSP22914 178 aa13.76□□□□□ -0.21
HMBOX1-212ENST00000558662 STUMQ69YW2 141 aa13.76□□□□□ -0.21
HMBOX1-212ENST00000558662 VWA1Q6PCB0 445 aa13.76□□□□□ -0.21
HMBOX1-212ENST00000558662 METTL27Q8N6F8 245 aaPredicted RBP13.76□□□□□ -0.21
HMBOX1-212ENST00000558662 NUDT11Q96G61 164 aa13.76□□□□□ -0.21
HMBOX1-212ENST00000558662 NCOA6Q14686 2063 aaPredicted RBP13.75□□□□□ -0.21
HMBOX1-212ENST00000558662 OR7C1O76099 320 aaPredicted RBP13.75□□□□□ -0.21
HMBOX1-212ENST00000558662 IGHEP01854 428 aa13.75□□□□□ -0.21
HMBOX1-212ENST00000558662 IAPPP10997 89 aa13.75□□□□□ -0.21
HMBOX1-212ENST00000558662 AMTP48728 403 aa13.75□□□□□ -0.21
HMBOX1-212ENST00000558662 RPEL1Q2QD12 228 aa13.75□□□□□ -0.21
HMBOX1-212ENST00000558662 SPANXN5Q5MJ07 72 aa13.75□□□□□ -0.21
HMBOX1-212ENST00000558662 UNQ5815/PRO19632Q6UWF5 114 aa13.75□□□□□ -0.21
HMBOX1-212ENST00000558662 FAM180AQ6UWF9 173 aa13.75□□□□□ -0.21
HMBOX1-212ENST00000558662 TCF24Q7RTU0 167 aa13.75□□□□□ -0.21
HMBOX1-212ENST00000558662 NABP1Q96AH0 204 aa13.75□□□□□ -0.21
HMBOX1-212ENST00000558662 BORCS7Q96B45 105 aa13.75□□□□□ -0.21
HMBOX1-212ENST00000558662 CCDC74BQ96LY2 380 aa13.75□□□□□ -0.21
HMBOX1-212ENST00000558662 OR6C1Q96RD1 312 aa13.75□□□□□ -0.21
HMBOX1-212ENST00000558662 TRAV9-2A0A087WT02 112 aa13.74□□□□□ -0.21
HMBOX1-212ENST00000558662 C1QTNF9BB2RNN3 333 aa13.74□□□□□ -0.21
HMBOX1-212ENST00000558662 H3BML4 177 aa13.74□□□□□ -0.21
HMBOX1-212ENST00000558662 VAMP5O95183 116 aa13.74□□□□□ -0.21
HMBOX1-212ENST00000558662 CD33P20138 364 aa13.74□□□□□ -0.21
HMBOX1-212ENST00000558662 TRIP6Q15654 476 aaKnown RBP13.74□□□□□ -0.21
HMBOX1-212ENST00000558662 VAMP3Q15836 100 aa13.74□□□□□ -0.21
HMBOX1-212ENST00000558662 CARD17Q5XLA6 110 aa13.74□□□□□ -0.21
HMBOX1-212ENST00000558662 TCF23Q7RTU1 214 aa13.74□□□□□ -0.21
HMBOX1-212ENST00000558662 RBM24Q9BX46 236 aaKnown RBP13.74□□□□□ -0.21
HMBOX1-212ENST00000558662 MTIF3Q9H2K0 278 aaKnown RBP13.74□□□□□ -0.21
HMBOX1-212ENST00000558662 NXPH3O95157 252 aa13.73□□□□□ -0.21
HMBOX1-212ENST00000558662 NDUFB4O95168 129 aa13.73□□□□□ -0.21
HMBOX1-212ENST00000558662 OR10J4P0C629 311 aa13.73□□□□□ -0.21
HMBOX1-212ENST00000558662 C1QTNF9P0C862 333 aa13.73□□□□□ -0.21
HMBOX1-212ENST00000558662 CBLN1P23435 193 aa13.73□□□□□ -0.21
HMBOX1-212ENST00000558662 CAPZBP47756 277 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms