RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 TMEM217Q8N7C4 229 aa5.04□□□□□ -1.6
LRRC28-207ENST00000558500 OR10H4Q8NGA5 316 aa5.04□□□□□ -1.6
LRRC28-207ENST00000558500 OR13C3Q8NGS6 347 aa5.04□□□□□ -1.6
LRRC28-207ENST00000558500 TMEM163Q8TC26 289 aa5.04□□□□□ -1.6
LRRC28-207ENST00000558500 TNFAIP8L1Q8WVP5 186 aa5.04□□□□□ -1.6
LRRC28-207ENST00000558500 CLCC1Q96S66 551 aa5.04□□□□□ -1.6
LRRC28-207ENST00000558500 ABHD14AQ9BUJ0 271 aa5.04□□□□□ -1.6
LRRC28-207ENST00000558500 PRRG3Q9BZD7 231 aa5.04□□□□□ -1.6
LRRC28-207ENST00000558500 RAB9BQ9NP90 201 aa5.04□□□□□ -1.6
LRRC28-207ENST00000558500 RCC2Q9P258 522 aaKnown RBP5.04□□□□□ -1.6
LRRC28-207ENST00000558500 GNG8Q9UK08 70 aa5.04□□□□□ -1.6
LRRC28-207ENST00000558500 ST3GAL6Q9Y274 331 aa5.04□□□□□ -1.6
LRRC28-207ENST00000558500 SAA2-SAA4A0A096LPE2 208 aa5.03□□□□□ -1.6
LRRC28-207ENST00000558500 GNGT2O14610 69 aa5.03□□□□□ -1.6
LRRC28-207ENST00000558500 GEMIN2O14893 280 aaKnown RBP5.03□□□□□ -1.6
LRRC28-207ENST00000558500 FADS2O95864 444 aaKnown RBP5.03□□□□□ -1.6
LRRC28-207ENST00000558500 CA2P00918 260 aa5.03□□□□□ -1.6
LRRC28-207ENST00000558500 SAA2P0DJI9 122 aaPredicted RBP5.03□□□□□ -1.6
LRRC28-207ENST00000558500 AADACP22760 399 aa5.03□□□□□ -1.6
LRRC28-207ENST00000558500 KIR2DS2P43631 304 aa5.03□□□□□ -1.6
LRRC28-207ENST00000558500 CCR9P51686 369 aa5.03□□□□□ -1.6
LRRC28-207ENST00000558500 MNAT1P51948 309 aa5.03□□□□□ -1.6
LRRC28-207ENST00000558500 RBM11P57052 281 aaKnown RBP5.03□□□□□ -1.6
LRRC28-207ENST00000558500 ADARB1P78563 741 aaKnown RBP5.03□□□□□ -1.6
LRRC28-207ENST00000558500 DEFA5Q01523 94 aa5.03□□□□□ -1.6
LRRC28-207ENST00000558500 ZNF45Q02386 682 aa5.03□□□□□ -1.6
LRRC28-207ENST00000558500 TRIM25Q14258 630 aaKnown RBP5.03□□□□□ -1.6
LRRC28-207ENST00000558500 GNMTQ14749 295 aa5.03□□□□□ -1.6
LRRC28-207ENST00000558500 KIR3DS1Q14943 382 aa5.03□□□□□ -1.6
LRRC28-207ENST00000558500 PSG5Q15238 335 aa5.03□□□□□ -1.6
LRRC28-207ENST00000558500 ATAD3CQ5T2N8 411 aa5.03□□□□□ -1.6
LRRC28-207ENST00000558500 C6orf183Q5T699 404 aa5.03□□□□□ -1.6
LRRC28-207ENST00000558500 SYT6Q5T7P8 510 aaPredicted RBP5.03□□□□□ -1.6
LRRC28-207ENST00000558500 LPCAT4Q643R3 524 aa5.03□□□□□ -1.6
LRRC28-207ENST00000558500 FAM131AQ6UXB0 335 aa5.03□□□□□ -1.6
LRRC28-207ENST00000558500 Q6ZWC4 215 aa5.03□□□□□ -1.6
LRRC28-207ENST00000558500 DHFR2Q86XF0 187 aa5.03□□□□□ -1.6
LRRC28-207ENST00000558500 GID4Q8IVV7 300 aa5.03□□□□□ -1.6
LRRC28-207ENST00000558500 DEFB107AQ8IZN7 70 aa5.03□□□□□ -1.6
LRRC28-207ENST00000558500 STX19Q8N4C7 294 aa5.03□□□□□ -1.6
LRRC28-207ENST00000558500 OR5T1Q8NG75 326 aa5.03□□□□□ -1.6
LRRC28-207ENST00000558500 OR52L2PQ8NGH6 319 aa5.03□□□□□ -1.6
LRRC28-207ENST00000558500 OR5D14Q8NGL3 314 aa5.03□□□□□ -1.6
LRRC28-207ENST00000558500 OR52N1Q8NH53 320 aa5.03□□□□□ -1.6
LRRC28-207ENST00000558500 GRPEL2Q8TAA5 225 aa5.03□□□□□ -1.6
LRRC28-207ENST00000558500 NEK7Q8TDX7 302 aa5.03□□□□□ -1.6
LRRC28-207ENST00000558500 DYNLRB2Q8TF09 96 aa5.03□□□□□ -1.6
LRRC28-207ENST00000558500 CPNE2Q96FN4 548 aaPredicted RBP5.03□□□□□ -1.6
LRRC28-207ENST00000558500 TINAGL1Q9GZM7 467 aaPredicted RBP5.03□□□□□ -1.6
LRRC28-207ENST00000558500 PARP12Q9H0J9 701 aaKnown RBP5.03□□□□□ -1.6
LRRC28-207ENST00000558500 OR2S2Q9NQN1 319 aa5.03□□□□□ -1.6
LRRC28-207ENST00000558500 WARS2Q9UGM6 360 aaKnown RBP5.03□□□□□ -1.6
LRRC28-207ENST00000558500 TRAPPC2LQ9UL33 140 aa5.03□□□□□ -1.6
LRRC28-207ENST00000558500 A0A0B4J203 849 aa5.02□□□□□ -1.61
LRRC28-207ENST00000558500 PRSS29PA6NIE9 313 aa5.02□□□□□ -1.61
LRRC28-207ENST00000558500 OR4C45A6NMZ5 311 aa5.02□□□□□ -1.61
LRRC28-207ENST00000558500 BMPR1BO00238 502 aa5.02□□□□□ -1.61
LRRC28-207ENST00000558500 SNX3O60493 162 aa5.02□□□□□ -1.61
LRRC28-207ENST00000558500 RBBP9O75884 186 aa5.02□□□□□ -1.61
LRRC28-207ENST00000558500 CDRT1O95170 752 aa5.02□□□□□ -1.61
LRRC28-207ENST00000558500 CT45A6P0DMU7 189 aa5.02□□□□□ -1.61
LRRC28-207ENST00000558500 CT45A5P0DMU8 189 aa5.02□□□□□ -1.61
LRRC28-207ENST00000558500 CT45A7P0DMV0 189 aa5.02□□□□□ -1.61
LRRC28-207ENST00000558500 RCC1P18754 421 aaPredicted RBP5.02□□□□□ -1.61
LRRC28-207ENST00000558500 PPP1CCP36873 323 aaKnown RBP5.02□□□□□ -1.61
LRRC28-207ENST00000558500 TCTAP57738 103 aa5.02□□□□□ -1.61
LRRC28-207ENST00000558500 MS4A2Q01362 244 aa5.02□□□□□ -1.61
LRRC28-207ENST00000558500 ZNF85Q03923 595 aa5.02□□□□□ -1.61
LRRC28-207ENST00000558500 FXYD3Q14802 87 aa5.02□□□□□ -1.61
LRRC28-207ENST00000558500 DEFB135Q30KP9 77 aa5.02□□□□□ -1.61
LRRC28-207ENST00000558500 TRAT1Q6PIZ9 186 aa5.02□□□□□ -1.61
LRRC28-207ENST00000558500 KCTD20Q7Z5Y7 419 aa5.02□□□□□ -1.61
LRRC28-207ENST00000558500 LINC00596Q86U02 117 aa5.02□□□□□ -1.61
LRRC28-207ENST00000558500 SERPINA12Q8IW75 414 aa5.02□□□□□ -1.61
LRRC28-207ENST00000558500 GAPTQ8N292 157 aa5.02□□□□□ -1.61
LRRC28-207ENST00000558500 PARP16Q8N5Y8 322 aa5.02□□□□□ -1.61
LRRC28-207ENST00000558500 OR4K15Q8NH41 348 aa5.02□□□□□ -1.61
LRRC28-207ENST00000558500 DNAJC9Q8WXX5 260 aa5.02□□□□□ -1.61
LRRC28-207ENST00000558500 GHSRQ92847 366 aa5.02□□□□□ -1.61
LRRC28-207ENST00000558500 SNAPC3Q92966 411 aa5.02□□□□□ -1.61
LRRC28-207ENST00000558500 MRPS24Q96EL2 167 aaKnown RBP5.02□□□□□ -1.61
LRRC28-207ENST00000558500 USMG5Q96IX5 58 aa5.02□□□□□ -1.61
LRRC28-207ENST00000558500 IL4I1Q96RQ9 567 aa5.02□□□□□ -1.61
LRRC28-207ENST00000558500 GPER1Q99527 375 aa5.02□□□□□ -1.61
LRRC28-207ENST00000558500 RNF5Q99942 180 aa5.02□□□□□ -1.61
LRRC28-207ENST00000558500 FAM192AQ9GZU8 254 aa5.02□□□□□ -1.61
LRRC28-207ENST00000558500 TAF9BQ9HBM6 251 aa5.02□□□□□ -1.61
LRRC28-207ENST00000558500 NDE1Q9NXR1 346 aa5.02□□□□□ -1.61
LRRC28-207ENST00000558500 TECRQ9NZ01 308 aaKnown RBP5.02□□□□□ -1.61
LRRC28-207ENST00000558500 IL36GQ9NZH8 169 aa5.02□□□□□ -1.61
LRRC28-207ENST00000558500 METTL1Q9UBP6 276 aaKnown RBP5.02□□□□□ -1.61
LRRC28-207ENST00000558500 JPT1Q9UK76 154 aa5.02□□□□□ -1.61
LRRC28-207ENST00000558500 ING4Q9UNL4 249 aa5.02□□□□□ -1.61
LRRC28-207ENST00000558500 MUC4Q99102 2169 aa5.02□□□□□ -1.61
LRRC28-207ENST00000558500 OR5H14A6NHG9 310 aa5.01□□□□□ -1.61
LRRC28-207ENST00000558500 C2orf70A6NJV1 201 aa5.01□□□□□ -1.61
LRRC28-207ENST00000558500 H0YJW9 148 aa5.01□□□□□ -1.61
LRRC28-207ENST00000558500 SLC22A1O15245 554 aa5.01□□□□□ -1.61
LRRC28-207ENST00000558500 XRCC3O43542 346 aa5.01□□□□□ -1.61
LRRC28-207ENST00000558500 YPEL1O60688 119 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms