RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 CHD7Q9P2D1 2997 aa9.54□□□□□ -0.88
PCAT29-201ENST00000558411 CDC42EP3Q9UKI2 254 aa9.54□□□□□ -0.88
PCAT29-201ENST00000558411 C2orf16Q68DN1 1984 aa9.54□□□□□ -0.88
PCAT29-201ENST00000558411 CCDC85CA6NKD9 419 aa9.53□□□□□ -0.88
PCAT29-201ENST00000558411 GALR2O43603 387 aaPredicted RBP9.53□□□□□ -0.88
PCAT29-201ENST00000558411 ATXN8OSP0DMR3 200 aa9.53□□□□□ -0.88
PCAT29-201ENST00000558411 KITLGP21583 273 aa9.53□□□□□ -0.88
PCAT29-201ENST00000558411 FKBP2P26885 142 aaKnown RBP9.53□□□□□ -0.88
PCAT29-201ENST00000558411 CLDN17P56750 224 aa9.53□□□□□ -0.88
PCAT29-201ENST00000558411 GNB1P62873 340 aa9.53□□□□□ -0.88
PCAT29-201ENST00000558411 FBLN7Q53RD9 439 aa9.53□□□□□ -0.88
PCAT29-201ENST00000558411 FFAR4Q5NUL3 377 aa9.53□□□□□ -0.88
PCAT29-201ENST00000558411 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.53□□□□□ -0.88
PCAT29-201ENST00000558411 RHBDD2Q6NTF9 364 aa9.53□□□□□ -0.88
PCAT29-201ENST00000558411 SLC22A18ASQ8N1D0 253 aa9.53□□□□□ -0.88
PCAT29-201ENST00000558411 TCTEX1D1Q8N7M0 179 aa9.53□□□□□ -0.88
PCAT29-201ENST00000558411 OR5T1Q8NG75 326 aa9.53□□□□□ -0.88
PCAT29-201ENST00000558411 OR56B2PQ8NGI1 322 aa9.53□□□□□ -0.88
PCAT29-201ENST00000558411 TMEM147Q9BVK8 224 aa9.53□□□□□ -0.88
PCAT29-201ENST00000558411 ATP23Q9Y6H3 246 aa9.53□□□□□ -0.88
PCAT29-201ENST00000558411 TRAV30A0A087WSZ9 112 aa9.53□□□□□ -0.88
PCAT29-201ENST00000558411 ZNF253O75346 499 aa9.53□□□□□ -0.88
PCAT29-201ENST00000558411 C1QTNF9P0C862 333 aa9.53□□□□□ -0.88
PCAT29-201ENST00000558411 PSG2P11465 335 aa9.53□□□□□ -0.88
PCAT29-201ENST00000558411 HOXB2P14652 356 aa9.53□□□□□ -0.88
PCAT29-201ENST00000558411 OR1D5P58170 312 aa9.53□□□□□ -0.88
PCAT29-201ENST00000558411 KRTDAPP60985 99 aa9.53□□□□□ -0.88
PCAT29-201ENST00000558411 SPANXN5Q5MJ07 72 aa9.53□□□□□ -0.88
PCAT29-201ENST00000558411 PNKDQ8N490 385 aa9.53□□□□□ -0.88
PCAT29-201ENST00000558411 PSMF1Q92530 271 aa9.53□□□□□ -0.88
PCAT29-201ENST00000558411 CORO2AQ92828 525 aa9.53□□□□□ -0.88
PCAT29-201ENST00000558411 SLC35D1Q9NTN3 355 aa9.53□□□□□ -0.88
PCAT29-201ENST00000558411 A0A1W2PNR3 127 aa9.52□□□□□ -0.89
PCAT29-201ENST00000558411 H3BMH7 237 aa9.52□□□□□ -0.89
PCAT29-201ENST00000558411 HMGB3O15347 200 aaKnown RBP9.52□□□□□ -0.89
PCAT29-201ENST00000558411 FBLP22087 321 aaKnown RBP9.52□□□□□ -0.89
PCAT29-201ENST00000558411 C12orf76Q8N812 135 aaPredicted RBP9.52□□□□□ -0.89
PCAT29-201ENST00000558411 CADM4Q8NFZ8 388 aa9.52□□□□□ -0.89
PCAT29-201ENST00000558411 OR4C5Q8NGB2 326 aa9.52□□□□□ -0.89
PCAT29-201ENST00000558411 OR10G8Q8NGN5 311 aa9.52□□□□□ -0.89
PCAT29-201ENST00000558411 OR2AE1Q8NHA4 323 aa9.52□□□□□ -0.89
PCAT29-201ENST00000558411 IFI44Q8TCB0 444 aa9.52□□□□□ -0.89
PCAT29-201ENST00000558411 IL36BQ9NZH7 164 aa9.52□□□□□ -0.89
PCAT29-201ENST00000558411 OR2W1Q9Y3N9 320 aa9.52□□□□□ -0.89
PCAT29-201ENST00000558411 CHTOPQ9Y3Y2 248 aaKnown RBP9.52□□□□□ -0.89
PCAT29-201ENST00000558411 PPIAL4AQ9Y536 164 aa9.52□□□□□ -0.89
PCAT29-201ENST00000558411 CEP290O15078 2479 aa9.52□□□□□ -0.89
PCAT29-201ENST00000558411 IGHV5-51A0A0C4DH38 117 aa9.52□□□□□ -0.89
PCAT29-201ENST00000558411 IGKV1-6A0A0C4DH72 117 aa9.52□□□□□ -0.89
PCAT29-201ENST00000558411 B4DGG1 531 aa9.52□□□□□ -0.89
PCAT29-201ENST00000558411 DHHO43323 396 aa9.52□□□□□ -0.89
PCAT29-201ENST00000558411 IGKV1-39P01597 117 aa9.52□□□□□ -0.89
PCAT29-201ENST00000558411 IGKV1D-39P04432 117 aa9.52□□□□□ -0.89
PCAT29-201ENST00000558411 CBLN1P23435 193 aa9.52□□□□□ -0.89
PCAT29-201ENST00000558411 TNFSF4P23510 183 aa9.52□□□□□ -0.89
PCAT29-201ENST00000558411 TIMP3P35625 211 aa9.52□□□□□ -0.89
PCAT29-201ENST00000558411 TLE1Q04724 770 aa9.52□□□□□ -0.89
PCAT29-201ENST00000558411 PDCD1Q15116 288 aa9.52□□□□□ -0.89
PCAT29-201ENST00000558411 TRIM61Q5EBN2 209 aa9.52□□□□□ -0.89
PCAT29-201ENST00000558411 OR10J3Q5JRS4 329 aa9.52□□□□□ -0.89
PCAT29-201ENST00000558411 FAM27BQ5VT28 67 aa9.52□□□□□ -0.89
PCAT29-201ENST00000558411 CHD9Q3L8U1 2897 aa9.51□□□□□ -0.89
PCAT29-201ENST00000558411 IGHV2-26A0A0B4J1V2 119 aa9.51□□□□□ -0.89
PCAT29-201ENST00000558411 IGHV1-69-2A0A0G2JMI3 117 aa9.51□□□□□ -0.89
PCAT29-201ENST00000558411 LILRA5A6NI73 299 aa9.51□□□□□ -0.89
PCAT29-201ENST00000558411 RBFOX2O43251 390 aaKnown RBP eCLIP9.51□□□□□ -0.89
PCAT29-201ENST00000558411 WDR1O75083 606 aa9.51□□□□□ -0.89
PCAT29-201ENST00000558411 IGKV1-5P01602 117 aa9.51□□□□□ -0.89
PCAT29-201ENST00000558411 TSPOP30536 169 aa9.51□□□□□ -0.89
PCAT29-201ENST00000558411 FASLGP48023 281 aa9.51□□□□□ -0.89
PCAT29-201ENST00000558411 ZNF90Q03938 601 aa9.51□□□□□ -0.89
PCAT29-201ENST00000558411 PHYHD1Q5SRE7 291 aa9.51□□□□□ -0.89
PCAT29-201ENST00000558411 ZNF324BQ6AW86 544 aaPredicted RBP9.51□□□□□ -0.89
PCAT29-201ENST00000558411 PCSK4Q6UW60 755 aa9.51□□□□□ -0.89
PCAT29-201ENST00000558411 NUDT10Q8NFP7 164 aa9.51□□□□□ -0.89
PCAT29-201ENST00000558411 RAB1CQ92928 201 aa9.51□□□□□ -0.89
PCAT29-201ENST00000558411 KLHDC7BQ96G42 594 aa9.51□□□□□ -0.89
PCAT29-201ENST00000558411 OR6C1Q96RD1 312 aa9.51□□□□□ -0.89
PCAT29-201ENST00000558411 GNB1LQ9BYB4 327 aa9.51□□□□□ -0.89
PCAT29-201ENST00000558411 NRN1Q9NPD7 142 aa9.51□□□□□ -0.89
PCAT29-201ENST00000558411 KLRF1Q9NZS2 232 aa9.51□□□□□ -0.89
PCAT29-201ENST00000558411 RALGAPA1Q6GYQ0 2036 aa9.51□□□□□ -0.89
PCAT29-201ENST00000558411 RP1P56715 2156 aa9.51□□□□□ -0.89
PCAT29-201ENST00000558411 TRBV6-6A0A0A6YYG2 114 aa9.5□□□□□ -0.89
PCAT29-201ENST00000558411 TNFSF11O14788 317 aa9.5□□□□□ -0.89
PCAT29-201ENST00000558411 SYNGR3O43761 229 aa9.5□□□□□ -0.89
PCAT29-201ENST00000558411 NDUFB4O95168 129 aa9.5□□□□□ -0.89
PCAT29-201ENST00000558411 CDC34P49427 236 aaPredicted RBP9.5□□□□□ -0.89
PCAT29-201ENST00000558411 IZUMO4Q1ZYL8 232 aa9.5□□□□□ -0.89
PCAT29-201ENST00000558411 RNF151Q2KHN1 245 aa9.5□□□□□ -0.89
PCAT29-201ENST00000558411 VWC2Q2TAL6 325 aa9.5□□□□□ -0.89
PCAT29-201ENST00000558411 KRTAP27-1Q3LI81 207 aa9.5□□□□□ -0.89
PCAT29-201ENST00000558411 ZNF542PQ5EBM4 170 aa9.5□□□□□ -0.89
PCAT29-201ENST00000558411 C1orf53Q5VUE5 145 aa9.5□□□□□ -0.89
PCAT29-201ENST00000558411 PLCXD3Q63HM9 321 aa9.5□□□□□ -0.89
PCAT29-201ENST00000558411 SAXO1Q8IYX7 474 aa9.5□□□□□ -0.89
PCAT29-201ENST00000558411 ZNF611Q8N823 705 aa9.5□□□□□ -0.89
PCAT29-201ENST00000558411 OR51H1Q8NH63 302 aa9.5□□□□□ -0.89
PCAT29-201ENST00000558411 KCNS1Q96KK3 526 aa9.5□□□□□ -0.89
PCAT29-201ENST00000558411 LRFN3Q9BTN0 628 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms