RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 HLA-DMAP28067 261 aa9.74□□□□□ -0.85
HMGB1P8-201ENST00000558211 CD34P28906 385 aa9.74□□□□□ -0.85
HMGB1P8-201ENST00000558211 HERPUD1Q15011 391 aa9.74□□□□□ -0.85
HMGB1P8-201ENST00000558211 SRSF7Q16629 238 aaKnown RBP eCLIP9.74□□□□□ -0.85
HMGB1P8-201ENST00000558211 TMEM30BQ3MIR4 351 aa9.74□□□□□ -0.85
HMGB1P8-201ENST00000558211 PLA1AQ53H76 456 aa9.74□□□□□ -0.85
HMGB1P8-201ENST00000558211 SPANXN2Q5MJ10 180 aa9.74□□□□□ -0.85
HMGB1P8-201ENST00000558211 ZNF626Q68DY1 528 aa9.74□□□□□ -0.85
HMGB1P8-201ENST00000558211 ETV3LQ6ZN32 361 aa9.74□□□□□ -0.85
HMGB1P8-201ENST00000558211 Q6ZS49 121 aa9.74□□□□□ -0.85
HMGB1P8-201ENST00000558211 CCDC190Q86UF4 302 aa9.74□□□□□ -0.85
HMGB1P8-201ENST00000558211 OR10X1Q8NGY0 326 aa9.74□□□□□ -0.85
HMGB1P8-201ENST00000558211 OR10J5Q8NHC4 309 aa9.74□□□□□ -0.85
HMGB1P8-201ENST00000558211 ZNF596Q8TC21 504 aa9.74□□□□□ -0.85
HMGB1P8-201ENST00000558211 SNAPC3Q92966 411 aa9.74□□□□□ -0.85
HMGB1P8-201ENST00000558211 SLC6A7Q99884 636 aa9.74□□□□□ -0.85
HMGB1P8-201ENST00000558211 PARP12Q9H0J9 701 aaKnown RBP9.74□□□□□ -0.85
HMGB1P8-201ENST00000558211 KLK11Q9UBX7 282 aa9.74□□□□□ -0.85
HMGB1P8-201ENST00000558211 HILPDAQ9Y5L2 63 aa9.74□□□□□ -0.85
HMGB1P8-201ENST00000558211 MTORP42345 2549 aa9.74□□□□□ -0.85
HMGB1P8-201ENST00000558211 NAV3Q8IVL0 2385 aa9.73□□□□□ -0.85
HMGB1P8-201ENST00000558211 ODF3BA8MYP8 253 aa9.73□□□□□ -0.85
HMGB1P8-201ENST00000558211 GABARAPH6UMI1 98 aa9.73□□□□□ -0.85
HMGB1P8-201ENST00000558211 YPEL1O60688 119 aa9.73□□□□□ -0.85
HMGB1P8-201ENST00000558211 TPPPO94811 219 aa9.73□□□□□ -0.85
HMGB1P8-201ENST00000558211 PMP2P02689 132 aa9.73□□□□□ -0.85
HMGB1P8-201ENST00000558211 NFYAP23511 347 aaPredicted RBP9.73□□□□□ -0.85
HMGB1P8-201ENST00000558211 HTR1DP28221 377 aa9.73□□□□□ -0.85
HMGB1P8-201ENST00000558211 OR3A3P47888 321 aa9.73□□□□□ -0.85
HMGB1P8-201ENST00000558211 ZNF134P52741 427 aa9.73□□□□□ -0.85
HMGB1P8-201ENST00000558211 BPIFB3P59826 476 aa9.73□□□□□ -0.85
HMGB1P8-201ENST00000558211 SSX2Q16385 188 aa9.73□□□□□ -0.85
HMGB1P8-201ENST00000558211 HLA-DRB5Q30154 266 aa9.73□□□□□ -0.85
HMGB1P8-201ENST00000558211 DEFB112Q30KQ8 113 aa9.73□□□□□ -0.85
HMGB1P8-201ENST00000558211 MIDNQ504T8 468 aa9.73□□□□□ -0.85
HMGB1P8-201ENST00000558211 CT45A1Q5HYN5 189 aa9.73□□□□□ -0.85
HMGB1P8-201ENST00000558211 OR2AK2Q8NG84 335 aa9.73□□□□□ -0.85
HMGB1P8-201ENST00000558211 OR4P4Q8NGL7 312 aa9.73□□□□□ -0.85
HMGB1P8-201ENST00000558211 CT45A3Q8NHU0 189 aa9.73□□□□□ -0.85
HMGB1P8-201ENST00000558211 YPEL2Q96QA6 119 aa9.73□□□□□ -0.85
HMGB1P8-201ENST00000558211 SOSTQ9BQB4 213 aa9.73□□□□□ -0.85
HMGB1P8-201ENST00000558211 CABLES2Q9BTV7 478 aa9.73□□□□□ -0.85
HMGB1P8-201ENST00000558211 MMP28Q9H239 520 aa9.73□□□□□ -0.85
HMGB1P8-201ENST00000558211 RDH8Q9NYR8 311 aa9.73□□□□□ -0.85
HMGB1P8-201ENST00000558211 PTTG2Q9NZH5 202 aa9.73□□□□□ -0.85
HMGB1P8-201ENST00000558211 RABL2AQ9UBK7 228 aaPredicted RBP9.73□□□□□ -0.85
HMGB1P8-201ENST00000558211 RNF150Q9ULK6 438 aa9.73□□□□□ -0.85
HMGB1P8-201ENST00000558211 RABL2BQ9UNT1 228 aa9.73□□□□□ -0.85
HMGB1P8-201ENST00000558211 RBM7Q9Y580 266 aaKnown RBP9.73□□□□□ -0.85
HMGB1P8-201ENST00000558211 V9GYH0 126 aa9.73□□□□□ -0.85
HMGB1P8-201ENST00000558211 TRBV6-7A0A0A0MS04 114 aa9.72□□□□□ -0.85
HMGB1P8-201ENST00000558211 BUB1B-PAK6H3BSN5 160 aa9.72□□□□□ -0.85
HMGB1P8-201ENST00000558211 IGLV1-47P01700 117 aa9.72□□□□□ -0.85
HMGB1P8-201ENST00000558211 CTXN2P0C2S0 81 aa9.72□□□□□ -0.85
HMGB1P8-201ENST00000558211 FAM157CP0CG43 387 aa9.72□□□□□ -0.85
HMGB1P8-201ENST00000558211 RCVRNP35243 200 aa9.72□□□□□ -0.85
HMGB1P8-201ENST00000558211 RFX2P48378 723 aa9.72□□□□□ -0.85
HMGB1P8-201ENST00000558211 MRPS10P82664 201 aaKnown RBP9.72□□□□□ -0.85
HMGB1P8-201ENST00000558211 SCGB2A2Q13296 93 aa9.72□□□□□ -0.85
HMGB1P8-201ENST00000558211 CDK10Q15131 360 aa9.72□□□□□ -0.85
HMGB1P8-201ENST00000558211 LDLRAD2Q5SZI1 272 aa9.72□□□□□ -0.85
HMGB1P8-201ENST00000558211 LYSMD2Q8IV50 215 aa9.72□□□□□ -0.85
HMGB1P8-201ENST00000558211 LYG1Q8N1E2 194 aa9.72□□□□□ -0.85
HMGB1P8-201ENST00000558211 SIGLECL1Q8N7X8 197 aa9.72□□□□□ -0.85
HMGB1P8-201ENST00000558211 ZNF439Q8NDP4 499 aa9.72□□□□□ -0.85
HMGB1P8-201ENST00000558211 BEND2Q8NDZ0 799 aa9.72□□□□□ -0.85
HMGB1P8-201ENST00000558211 OR5AP2Q8NGF4 316 aa9.72□□□□□ -0.85
HMGB1P8-201ENST00000558211 OR5H2Q8NGV7 314 aa9.72□□□□□ -0.85
HMGB1P8-201ENST00000558211 ZNF48Q96MX3 618 aaPredicted RBP9.72□□□□□ -0.85
HMGB1P8-201ENST00000558211 ABHD14AQ9BUJ0 271 aa9.72□□□□□ -0.85
HMGB1P8-201ENST00000558211 C11orf54Q9H0W9 315 aaPredicted RBP9.72□□□□□ -0.85
HMGB1P8-201ENST00000558211 TNFRSF19Q9NS68 423 aa9.72□□□□□ -0.85
HMGB1P8-201ENST00000558211 NECAP2Q9NVZ3 263 aa9.72□□□□□ -0.85
HMGB1P8-201ENST00000558211 EHFQ9NZC4 300 aa9.72□□□□□ -0.85
HMGB1P8-201ENST00000558211 DPM3Q9P2X0 92 aa9.72□□□□□ -0.85
HMGB1P8-201ENST00000558211 MTFP1Q9UDX5 166 aa9.72□□□□□ -0.85
HMGB1P8-201ENST00000558211 TBL2Q9Y4P3 447 aaKnown RBP9.72□□□□□ -0.85
HMGB1P8-201ENST00000558211 NSD1Q96L73 2696 aaPredicted RBP9.71□□□□□ -0.85
HMGB1P8-201ENST00000558211 LEUTXA8MZ59 168 aa9.71□□□□□ -0.86
HMGB1P8-201ENST00000558211 M0QYG6 137 aa9.71□□□□□ -0.86
HMGB1P8-201ENST00000558211 CTDSPLO15194 276 aa9.71□□□□□ -0.86
HMGB1P8-201ENST00000558211 PLA2G1BP04054 148 aaKnown RBP9.71□□□□□ -0.86
HMGB1P8-201ENST00000558211 FBP1P09467 338 aa9.71□□□□□ -0.86
HMGB1P8-201ENST00000558211 OR8U9P0C7N5 309 aa9.71□□□□□ -0.86
HMGB1P8-201ENST00000558211 OR5H8P0DN80 308 aa9.71□□□□□ -0.86
HMGB1P8-201ENST00000558211 HRH1P35367 487 aa9.71□□□□□ -0.86
HMGB1P8-201ENST00000558211 REG1BP48304 166 aa9.71□□□□□ -0.86
HMGB1P8-201ENST00000558211 ACTBP60709 375 aa9.71□□□□□ -0.86
HMGB1P8-201ENST00000558211 ACTG1P63261 375 aa9.71□□□□□ -0.86
HMGB1P8-201ENST00000558211 DIAPH2-AS1Q14236 149 aa9.71□□□□□ -0.86
HMGB1P8-201ENST00000558211 ZNF79Q15937 498 aa9.71□□□□□ -0.86
HMGB1P8-201ENST00000558211 MINOS1Q5TGZ0 78 aa9.71□□□□□ -0.86
HMGB1P8-201ENST00000558211 RBMS3Q6XE24 437 aaKnown RBP9.71□□□□□ -0.86
HMGB1P8-201ENST00000558211 SLC25A48Q6ZT89 311 aaKnown RBP9.71□□□□□ -0.86
HMGB1P8-201ENST00000558211 C9orf139Q6ZV77 190 aa9.71□□□□□ -0.86
HMGB1P8-201ENST00000558211 DYNAPQ8N1N2 210 aa9.71□□□□□ -0.86
HMGB1P8-201ENST00000558211 LINC00311Q8N616 119 aa9.71□□□□□ -0.86
HMGB1P8-201ENST00000558211 OR8U1Q8NH10 309 aa9.71□□□□□ -0.86
HMGB1P8-201ENST00000558211 SMIM4Q8WVI0 70 aa9.71□□□□□ -0.86
HMGB1P8-201ENST00000558211 RPEQ96AT9 228 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms