RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 GAGE5Q13069 117 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 GAGE6Q13070 117 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 MYH9P35579 1960 aaKnown RBP3.19□□□□□ -1.9
ATXN3-248ENST00000558190 FXYD3Q14802 87 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 RSPO4Q2I0M5 234 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-248ENST00000558190 ZAR1Q86SH2 424 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 TPRX1Q8N7U7 411 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 ZBTB34Q8NCN2 500 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 CPEB3Q8NE35 698 aaKnown RBP3.19□□□□□ -1.9
ATXN3-248ENST00000558190 C12orf49Q9H741 205 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 IZUMO1RA6ND01 250 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 PRRT4C9JH25 899 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 M0R135 149 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 GNG3P63215 75 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 OR2Z1Q8NG97 314 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 SLC25A43Q8WUT9 341 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-248ENST00000558190 NPIPB3Q92617 1050 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 ZNF799Q96GE5 643 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 TSPAN32Q96QS1 320 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 TAAR3PQ9P1P4 343 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 TRAV8-2A0A0B4J237 113 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 PPYP01298 95 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 IGHV4-39P01824 125 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 PSG2P11465 335 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 ZNF414Q96IQ9 312 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 ST20Q9HBF5 79 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 CBLN3Q6UW01 205 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 LIPT2A6NK58 231 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 H3BTX0 84 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 C1orf174Q8IYL3 243 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 OR2V1Q8NHB1 315 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 CST9LQ9H4G1 147 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 CDC42BPBQ9Y5S2 1711 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 SYCP2Q9BX26 1530 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 CYC1P08574 325 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 GABRG2P18507 467 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 OR5A1Q8NGJ0 315 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 WFDC5Q8TCV5 224 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 TMEM170AQ8WVE7 144 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 SCGB3A1Q96QR1 104 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 PRSS27Q9BQR3 290 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 HDGFL3Q9Y3E1 203 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 DRD1P21728 446 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 RAB9AP51151 201 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 TDRG1Q3Y452 100 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 LDLRAD1Q5T700 205 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 TSPOP30536 169 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 FAM110CQ1W6H9 321 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 A0A1B0GW15 77 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 CD46P15529 392 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 FAM27BQ5VT28 67 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 CDK13Q14004 1512 aaKnown RBP3.19□□□□□ -1.9
ATXN3-248ENST00000558190 KDM5BQ9UGL1 1544 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 ATG2BQ96BY7 2078 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 GAGE12HA6NDE8 117 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 APOHP02749 345 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-248ENST00000558190 RNPS1Q15287 305 aaKnown RBP3.19□□□□□ -1.9
ATXN3-248ENST00000558190 ZPLD1Q8TCW7 415 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 RHBDD1Q8TEB9 315 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 RTL8AQ9BWD3 113 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 CRIM1Q9NZV1 1036 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 M0QZ24 198 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 ZIC3O60481 467 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 ZNF766Q5HY98 468 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 SPAG8Q99932 426 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-248ENST00000558190 CDK12Q9NYV4 1490 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-248ENST00000558190 A0A1B0GTI1 187 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 CIRBPQ14011 172 aaKnown RBP3.19□□□□□ -1.9
ATXN3-248ENST00000558190 LYSMD4Q5XG99 296 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 RNF186Q9NXI6 227 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 ERG28Q9UKR5 140 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 URB2Q14146 1524 aaKnown RBP3.19□□□□□ -1.9
ATXN3-248ENST00000558190 MLNRO43193 412 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 LIPFP07098 398 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 TBR1Q16650 682 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 ZDHHC23Q8IYP9 409 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 EGLN1Q9GZT9 426 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 DEPPQ9NTK1 212 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 K7N7A8 449 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 M0R3E3 92 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 CA1P00915 261 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-248ENST00000558190 HTN1P15515 57 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 DPTQ07507 201 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 SSTR5P35346 364 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 PSG6Q00889 435 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 PIGYQ3MUY2 71 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 C8orf44Q96CB5 159 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 PRNDQ9UKY0 176 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 ZNF793Q6ZN11 406 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 FGF21Q9NSA1 209 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 KDM6BO15054 1643 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 A0A1W2PPC4 97 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 FOXH1O75593 365 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 ADH4P08319 380 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 CXorf67Q86X51 503 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-248ENST00000558190 MARS2Q96GW9 593 aaKnown RBP3.19□□□□□ -1.9
ATXN3-248ENST00000558190 USF3Q68DE3 2245 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 A0A1W2PQF6 199 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 VENTXO95231 258 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 TMEM249Q2WGJ8 235 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms