RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 VENTXO95231 258 aa9.4□□□□□ -0.9
SEMA4B-204ENST00000558065 ATP1B2P14415 290 aaPredicted RBP9.4□□□□□ -0.9
SEMA4B-204ENST00000558065 COL9A2Q14055 689 aaPredicted RBP9.4□□□□□ -0.9
SEMA4B-204ENST00000558065 OR5C1Q8NGR4 320 aa9.4□□□□□ -0.9
SEMA4B-204ENST00000558065 VSTM2AQ8TAG5 236 aa9.4□□□□□ -0.9
SEMA4B-204ENST00000558065 NANOS1Q8WY41 292 aaKnown RBP9.4□□□□□ -0.9
SEMA4B-204ENST00000558065 TNFRSF13CQ96RJ3 184 aa9.4□□□□□ -0.9
SEMA4B-204ENST00000558065 ANAPC13Q9BS18 74 aa9.4□□□□□ -0.9
SEMA4B-204ENST00000558065 HS3ST2Q9Y278 367 aa9.4□□□□□ -0.9
SEMA4B-204ENST00000558065 SPCS1Q9Y6A9 102 aa9.4□□□□□ -0.9
SEMA4B-204ENST00000558065 SEC11AP67812 179 aa9.4□□□□□ -0.91
SEMA4B-204ENST00000558065 MRPS34P82930 218 aaKnown RBP9.4□□□□□ -0.91
SEMA4B-204ENST00000558065 SLC25A34Q6PIV7 304 aa9.4□□□□□ -0.91
SEMA4B-204ENST00000558065 ADAMTSL5Q6ZMM2 481 aa9.4□□□□□ -0.91
SEMA4B-204ENST00000558065 OOSP2Q86WS3 158 aa9.4□□□□□ -0.91
SEMA4B-204ENST00000558065 DAZLQ92904 295 aaKnown RBP9.4□□□□□ -0.91
SEMA4B-204ENST00000558065 SRSF8Q9BRL6 282 aaKnown RBP9.4□□□□□ -0.91
SEMA4B-204ENST00000558065 A0A0G2JLM5 398 aa9.39□□□□□ -0.91
SEMA4B-204ENST00000558065 LOC102725191A0A1B0GVB3 256 aa9.39□□□□□ -0.91
SEMA4B-204ENST00000558065 NPIPB5A8MRT5 1133 aa9.39□□□□□ -0.91
SEMA4B-204ENST00000558065 FRMD6-AS1P0C7T7 363 aa9.39□□□□□ -0.91
SEMA4B-204ENST00000558065 HOXD9P28356 352 aaPredicted RBP9.39□□□□□ -0.91
SEMA4B-204ENST00000558065 TLE1Q04724 770 aa9.39□□□□□ -0.91
SEMA4B-204ENST00000558065 Q56UQ5 140 aa9.39□□□□□ -0.91
SEMA4B-204ENST00000558065 WDR38Q5JTN6 314 aa9.39□□□□□ -0.91
SEMA4B-204ENST00000558065 EBLN2Q6P2I7 272 aa9.39□□□□□ -0.91
SEMA4B-204ENST00000558065 GLIPR1L1Q6UWM5 242 aa9.39□□□□□ -0.91
SEMA4B-204ENST00000558065 UEVLDQ8IX04 471 aa9.39□□□□□ -0.91
SEMA4B-204ENST00000558065 SUSD3Q96L08 255 aa9.39□□□□□ -0.91
SEMA4B-204ENST00000558065 PELI2Q9HAT8 420 aa9.39□□□□□ -0.91
SEMA4B-204ENST00000558065 FAM60AQ9NP50 221 aa9.39□□□□□ -0.91
SEMA4B-204ENST00000558065 TAS2R4Q9NYW5 299 aa9.39□□□□□ -0.91
SEMA4B-204ENST00000558065 A0A1W2PPM0 123 aa9.39□□□□□ -0.91
SEMA4B-204ENST00000558065 DCDC2BA2VCK2 349 aa9.39□□□□□ -0.91
SEMA4B-204ENST00000558065 SERPINE2P07093 398 aa9.39□□□□□ -0.91
SEMA4B-204ENST00000558065 TIGITQ495A1 244 aa9.39□□□□□ -0.91
SEMA4B-204ENST00000558065 OR10J3Q5JRS4 329 aa9.39□□□□□ -0.91
SEMA4B-204ENST00000558065 OR4N5Q8IXE1 308 aa9.39□□□□□ -0.91
SEMA4B-204ENST00000558065 GRAMD2BQ96HH9 432 aa9.39□□□□□ -0.91
SEMA4B-204ENST00000558065 C4orf45Q96LM5 186 aa9.39□□□□□ -0.91
SEMA4B-204ENST00000558065 CEP290O15078 2479 aa9.39□□□□□ -0.91
SEMA4B-204ENST00000558065 IGLV3-10A0A075B6K4 115 aa9.39□□□□□ -0.91
SEMA4B-204ENST00000558065 MBLAC1A4D2B0 266 aaPredicted RBP9.39□□□□□ -0.91
SEMA4B-204ENST00000558065 CRYM-AS1A6NIL9 109 aa9.39□□□□□ -0.91
SEMA4B-204ENST00000558065 H0Y980 276 aa9.39□□□□□ -0.91
SEMA4B-204ENST00000558065 NKX2-8O15522 239 aa9.39□□□□□ -0.91
SEMA4B-204ENST00000558065 LATO43561 262 aa9.39□□□□□ -0.91
SEMA4B-204ENST00000558065 SPINK8P0C7L1 97 aa9.39□□□□□ -0.91
SEMA4B-204ENST00000558065 CEBPBP17676 345 aa9.39□□□□□ -0.91
SEMA4B-204ENST00000558065 PRTN3P24158 256 aa9.39□□□□□ -0.91
SEMA4B-204ENST00000558065 PTGER1P34995 402 aa9.39□□□□□ -0.91
SEMA4B-204ENST00000558065 NCBP2P52298 156 aaKnown RBP eCLIP9.39□□□□□ -0.91
SEMA4B-204ENST00000558065 YPEL5P62699 121 aa9.39□□□□□ -0.91
SEMA4B-204ENST00000558065 CPEB2Q7Z5Q1 589 aaKnown RBP9.39□□□□□ -0.91
SEMA4B-204ENST00000558065 TSKUQ8WUA8 353 aa9.39□□□□□ -0.91
SEMA4B-204ENST00000558065 ZNF296Q8WUU4 475 aaPredicted RBP9.39□□□□□ -0.91
SEMA4B-204ENST00000558065 PIGTQ969N2 578 aa9.39□□□□□ -0.91
SEMA4B-204ENST00000558065 KCNIP1Q9NZI2 227 aa9.39□□□□□ -0.91
SEMA4B-204ENST00000558065 HCSTQ9UBK5 93 aa9.39□□□□□ -0.91
SEMA4B-204ENST00000558065 URB1O60287 2271 aaKnown RBP9.38□□□□□ -0.91
SEMA4B-204ENST00000558065 SOX1O00570 391 aaPredicted RBP9.38□□□□□ -0.91
SEMA4B-204ENST00000558065 TIMP1P01033 207 aa9.38□□□□□ -0.91
SEMA4B-204ENST00000558065 DYNLT3P51808 116 aa9.38□□□□□ -0.91
SEMA4B-204ENST00000558065 QRFPP83859 136 aa9.38□□□□□ -0.91
SEMA4B-204ENST00000558065 C1orf100Q5SVJ3 147 aa9.38□□□□□ -0.91
SEMA4B-204ENST00000558065 ZNF324BQ6AW86 544 aaPredicted RBP9.38□□□□□ -0.91
SEMA4B-204ENST00000558065 C2orf91Q6ZV80 131 aa9.38□□□□□ -0.91
SEMA4B-204ENST00000558065 FA2HQ7L5A8 372 aa9.38□□□□□ -0.91
SEMA4B-204ENST00000558065 OR8B3Q8NGG8 313 aa9.38□□□□□ -0.91
SEMA4B-204ENST00000558065 BORCS7Q96B45 105 aa9.38□□□□□ -0.91
SEMA4B-204ENST00000558065 OR8B2Q96RD0 313 aa9.38□□□□□ -0.91
SEMA4B-204ENST00000558065 TM2D2Q9BX73 214 aa9.38□□□□□ -0.91
SEMA4B-204ENST00000558065 PECRQ9BY49 303 aa9.38□□□□□ -0.91
SEMA4B-204ENST00000558065 SCRT2Q9NQ03 307 aa9.38□□□□□ -0.91
SEMA4B-204ENST00000558065 KIF26BQ2KJY2 2108 aa9.38□□□□□ -0.91
SEMA4B-204ENST00000558065 ZNF737O75373 536 aa9.38□□□□□ -0.91
SEMA4B-204ENST00000558065 F2RP25116 425 aa9.38□□□□□ -0.91
SEMA4B-204ENST00000558065 PRICKLE4Q2TBC4 344 aa9.38□□□□□ -0.91
SEMA4B-204ENST00000558065 ASTLQ6HA08 431 aaPredicted RBP9.38□□□□□ -0.91
SEMA4B-204ENST00000558065 LYZL2Q7Z4W2 148 aa9.38□□□□□ -0.91
SEMA4B-204ENST00000558065 C18orf32Q8TCD1 76 aa9.38□□□□□ -0.91
SEMA4B-204ENST00000558065 PP6455Q8WZ26 134 aa9.38□□□□□ -0.91
SEMA4B-204ENST00000558065 ZNF501Q96CX3 271 aaPredicted RBP9.38□□□□□ -0.91
SEMA4B-204ENST00000558065 AP1S3Q96PC3 154 aa9.38□□□□□ -0.91
SEMA4B-204ENST00000558065 NMNAT3Q96T66 252 aa9.38□□□□□ -0.91
SEMA4B-204ENST00000558065 CDIP1Q9H305 208 aa9.38□□□□□ -0.91
SEMA4B-204ENST00000558065 LINC00312Q9Y6C7 94 aa9.38□□□□□ -0.91
SEMA4B-204ENST00000558065 ARHGAP21Q5T5U3 1957 aa9.38□□□□□ -0.91
SEMA4B-204ENST00000558065 GLOD5A6NK44 160 aa9.38□□□□□ -0.91
SEMA4B-204ENST00000558065 CER1O95813 267 aa9.38□□□□□ -0.91
SEMA4B-204ENST00000558065 MT-ATP8P03928 68 aa9.38□□□□□ -0.91
SEMA4B-204ENST00000558065 ARF1P84077 181 aaKnown RBP9.38□□□□□ -0.91
SEMA4B-204ENST00000558065 CA13Q8N1Q1 262 aa9.38□□□□□ -0.91
SEMA4B-204ENST00000558065 OR10G8Q8NGN5 311 aa9.38□□□□□ -0.91
SEMA4B-204ENST00000558065 MRPL30Q8TCC3 161 aaKnown RBP9.38□□□□□ -0.91
SEMA4B-204ENST00000558065 SCAMP4Q969E2 229 aa9.38□□□□□ -0.91
SEMA4B-204ENST00000558065 MED12LQ86YW9 2145 aa9.37□□□□□ -0.91
SEMA4B-204ENST00000558065 J3QR89 54 aa9.37□□□□□ -0.91
SEMA4B-204ENST00000558065 SLC6A6P31641 620 aa9.37□□□□□ -0.91
SEMA4B-204ENST00000558065 CLDN2P57739 230 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms