RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 DRAM1Q8N682 238 aa11.93□□□□□ -0.5
VIPAS39-210ENST00000557466 OR56B4Q8NH76 319 aa11.93□□□□□ -0.5
VIPAS39-210ENST00000557466 GPX8Q8TED1 209 aa11.93□□□□□ -0.5
VIPAS39-210ENST00000557466 RTN4IP1Q8WWV3 396 aaPredicted RBP11.93□□□□□ -0.5
VIPAS39-210ENST00000557466 ABHD14BQ96IU4 210 aa11.93□□□□□ -0.5
VIPAS39-210ENST00000557466 MDFIQ99750 246 aa11.93□□□□□ -0.5
VIPAS39-210ENST00000557466 GINS4Q9BRT9 223 aa11.93□□□□□ -0.5
VIPAS39-210ENST00000557466 LANCL1O43813 399 aa11.92□□□□□ -0.5
VIPAS39-210ENST00000557466 LPLP06858 475 aa11.92□□□□□ -0.5
VIPAS39-210ENST00000557466 ARPC4P59998 168 aa11.92□□□□□ -0.5
VIPAS39-210ENST00000557466 ACTG1P63261 375 aa11.92□□□□□ -0.5
VIPAS39-210ENST00000557466 CCBE1Q6UXH8 406 aaPredicted RBP11.92□□□□□ -0.5
VIPAS39-210ENST00000557466 ZNF833PQ6ZTB9 187 aa11.92□□□□□ -0.5
VIPAS39-210ENST00000557466 MOB3BQ86TA1 216 aa11.92□□□□□ -0.5
VIPAS39-210ENST00000557466 TMEM219Q86XT9 240 aa11.92□□□□□ -0.5
VIPAS39-210ENST00000557466 TGIF2LXQ8IUE1 241 aa11.92□□□□□ -0.5
VIPAS39-210ENST00000557466 DGCR14Q96DF8 476 aaKnown RBP11.92□□□□□ -0.5
VIPAS39-210ENST00000557466 ABHD1Q96SE0 405 aa11.92□□□□□ -0.5
VIPAS39-210ENST00000557466 AGMATQ9BSE5 352 aa11.92□□□□□ -0.5
VIPAS39-210ENST00000557466 SCPEP1Q9HB40 452 aa11.92□□□□□ -0.5
VIPAS39-210ENST00000557466 IGHV3-72A0A0B4J1Y9 119 aa11.91□□□□□ -0.5
VIPAS39-210ENST00000557466 TXNL1O43396 289 aa11.91□□□□□ -0.5
VIPAS39-210ENST00000557466 SNRNP70P08621 437 aaKnown RBP11.91□□□□□ -0.5
VIPAS39-210ENST00000557466 CTXN2P0C2S0 81 aa11.91□□□□□ -0.5
VIPAS39-210ENST00000557466 NAT1P18440 290 aa11.91□□□□□ -0.5
VIPAS39-210ENST00000557466 HABP2Q14520 560 aaPredicted RBP11.91□□□□□ -0.5
VIPAS39-210ENST00000557466 RPL39P5Q59GN2 51 aa11.91□□□□□ -0.5
VIPAS39-210ENST00000557466 CAPSLQ8WWF8 208 aa11.91□□□□□ -0.5
VIPAS39-210ENST00000557466 DIRAS2Q96HU8 199 aa11.91□□□□□ -0.5
VIPAS39-210ENST00000557466 ZNF251Q9BRH9 671 aa11.91□□□□□ -0.5
VIPAS39-210ENST00000557466 MRPL20Q9BYC9 149 aaKnown RBP11.91□□□□□ -0.5
VIPAS39-210ENST00000557466 PIPOXQ9P0Z9 390 aa11.91□□□□□ -0.5
VIPAS39-210ENST00000557466 RNF150Q9ULK6 438 aa11.91□□□□□ -0.5
VIPAS39-210ENST00000557466 FAM90A9PA6NNJ1 464 aa11.9□□□□□ -0.5
VIPAS39-210ENST00000557466 SULT1C2O00338 296 aa11.9□□□□□ -0.5
VIPAS39-210ENST00000557466 RAB29O14966 203 aa11.9□□□□□ -0.5
VIPAS39-210ENST00000557466 TPPPO94811 219 aa11.9□□□□□ -0.5
VIPAS39-210ENST00000557466 OR8U9P0C7N5 309 aa11.9□□□□□ -0.5
VIPAS39-210ENST00000557466 NFYAP23511 347 aaPredicted RBP11.9□□□□□ -0.5
VIPAS39-210ENST00000557466 TNFSF8P32971 234 aa11.9□□□□□ -0.5
VIPAS39-210ENST00000557466 RPL15P61313 204 aaKnown RBP11.9□□□□□ -0.5
VIPAS39-210ENST00000557466 RELBQ01201 579 aa11.9□□□□□ -0.5
VIPAS39-210ENST00000557466 DHRS7BQ6IAN0 325 aaPredicted RBP11.9□□□□□ -0.5
VIPAS39-210ENST00000557466 FAM71F2Q6NXP2 309 aa11.9□□□□□ -0.5
VIPAS39-210ENST00000557466 LIAT1Q6ZQX7 453 aa11.9□□□□□ -0.5
VIPAS39-210ENST00000557466 OR8U1Q8NH10 309 aa11.9□□□□□ -0.5
VIPAS39-210ENST00000557466 RBMXL1Q96E39 390 aaKnown RBP11.9□□□□□ -0.5
VIPAS39-210ENST00000557466 OR2D2Q9H210 308 aa11.9□□□□□ -0.5
VIPAS39-210ENST00000557466 MMP27Q9H306 513 aa11.9□□□□□ -0.5
VIPAS39-210ENST00000557466 C1RLQ9NZP8 487 aa11.9□□□□□ -0.5
VIPAS39-210ENST00000557466 PITPNC1Q9UKF7 332 aa11.9□□□□□ -0.5
VIPAS39-210ENST00000557466 A3GALT2U3KPV4 340 aa11.9□□□□□ -0.5
VIPAS39-210ENST00000557466 ATRQ13535 2644 aa11.89□□□□□ -0.51
VIPAS39-210ENST00000557466 ZNF736B4DX44 427 aaPredicted RBP11.89□□□□□ -0.51
VIPAS39-210ENST00000557466 PROP1O75360 226 aa11.89□□□□□ -0.51
VIPAS39-210ENST00000557466 IGKV1D-33P01593 117 aa11.89□□□□□ -0.51
VIPAS39-210ENST00000557466 IGKV1-33P01594 117 aa11.89□□□□□ -0.51
VIPAS39-210ENST00000557466 CRYBA1P05813 215 aa11.89□□□□□ -0.51
VIPAS39-210ENST00000557466 HKR1P10072 659 aa11.89□□□□□ -0.51
VIPAS39-210ENST00000557466 RCVRNP35243 200 aa11.89□□□□□ -0.51
VIPAS39-210ENST00000557466 GPR12P47775 334 aa11.89□□□□□ -0.51
VIPAS39-210ENST00000557466 LSAMPQ13449 338 aa11.89□□□□□ -0.51
VIPAS39-210ENST00000557466 IL18Q14116 193 aa11.89□□□□□ -0.51
VIPAS39-210ENST00000557466 CDK10Q15131 360 aa11.89□□□□□ -0.51
VIPAS39-210ENST00000557466 OR5AP2Q8NGF4 316 aa11.89□□□□□ -0.51
VIPAS39-210ENST00000557466 OR52I2Q8NH67 350 aa11.89□□□□□ -0.51
VIPAS39-210ENST00000557466 C15orf40Q8WUR7 153 aa11.89□□□□□ -0.51
VIPAS39-210ENST00000557466 C5orf30Q96GV9 206 aa11.89□□□□□ -0.51
VIPAS39-210ENST00000557466 NABP2Q9BQ15 211 aa11.89□□□□□ -0.51
VIPAS39-210ENST00000557466 NECAP2Q9NVZ3 263 aa11.89□□□□□ -0.51
VIPAS39-210ENST00000557466 ZNF221Q9UK13 617 aa11.89□□□□□ -0.51
VIPAS39-210ENST00000557466 OR2W1Q9Y3N9 320 aa11.89□□□□□ -0.51
VIPAS39-210ENST00000557466 A6NHS1 94 aa11.88□□□□□ -0.51
VIPAS39-210ENST00000557466 J3QRK9 145 aa11.88□□□□□ -0.51
VIPAS39-210ENST00000557466 TUSC2O75896 110 aa11.88□□□□□ -0.51
VIPAS39-210ENST00000557466 TAS2R46P59540 309 aa11.88□□□□□ -0.51
VIPAS39-210ENST00000557466 DGCR2P98153 550 aa11.88□□□□□ -0.51
VIPAS39-210ENST00000557466 HES1Q14469 280 aa11.88□□□□□ -0.51
VIPAS39-210ENST00000557466 PYHIN1Q6K0P9 492 aa11.88□□□□□ -0.51
VIPAS39-210ENST00000557466 THNSL2Q86YJ6 484 aa11.88□□□□□ -0.51
VIPAS39-210ENST00000557466 S1PR3Q99500 378 aa11.88□□□□□ -0.51
VIPAS39-210ENST00000557466 SLC25A33Q9BSK2 321 aa11.88□□□□□ -0.51
VIPAS39-210ENST00000557466 GHITMQ9H3K2 345 aa11.88□□□□□ -0.51
VIPAS39-210ENST00000557466 RAB18Q9NP72 206 aa11.88□□□□□ -0.51
VIPAS39-210ENST00000557466 EHFQ9NZC4 300 aa11.88□□□□□ -0.51
VIPAS39-210ENST00000557466 KLK11Q9UBX7 282 aa11.88□□□□□ -0.51
VIPAS39-210ENST00000557466 RBM7Q9Y580 266 aaKnown RBP11.88□□□□□ -0.51
VIPAS39-210ENST00000557466 IGKV1D-13A0A0B4J2D9 117 aa11.87□□□□□ -0.51
VIPAS39-210ENST00000557466 TMEM89A2RUT3 159 aa11.87□□□□□ -0.51
VIPAS39-210ENST00000557466 GABARAPH6UMI1 98 aa11.87□□□□□ -0.51
VIPAS39-210ENST00000557466 OR2F2O95006 317 aa11.87□□□□□ -0.51
VIPAS39-210ENST00000557466 NDUFA7O95182 113 aa11.87□□□□□ -0.51
VIPAS39-210ENST00000557466 PMP2P02689 132 aa11.87□□□□□ -0.51
VIPAS39-210ENST00000557466 FAM106CPP0CH98 169 aa11.87□□□□□ -0.51
VIPAS39-210ENST00000557466 CT45A6P0DMU7 189 aa11.87□□□□□ -0.51
VIPAS39-210ENST00000557466 CT45A5P0DMU8 189 aa11.87□□□□□ -0.51
VIPAS39-210ENST00000557466 CT45A7P0DMV0 189 aa11.87□□□□□ -0.51
VIPAS39-210ENST00000557466 OR5H8P0DN80 308 aa11.87□□□□□ -0.51
VIPAS39-210ENST00000557466 IGKV1-13P0DP09 117 aa11.87□□□□□ -0.51
VIPAS39-210ENST00000557466 TMEM11P17152 192 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms