RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 TRGV5A0A0B4J1U4 118 aa7.76□□□□□ -1.17
SYNE3-205ENST00000557275 PITX1P78337 314 aaPredicted RBP7.76□□□□□ -1.17
SYNE3-205ENST00000557275 GCSAMLQ5JQS6 135 aa7.76□□□□□ -1.17
SYNE3-205ENST00000557275 OR52M1Q8NGK5 317 aa7.76□□□□□ -1.17
SYNE3-205ENST00000557275 WNT1P04628 370 aa7.76□□□□□ -1.17
SYNE3-205ENST00000557275 GAGE2BQ13066 116 aa7.76□□□□□ -1.17
SYNE3-205ENST00000557275 GAGE2EQ4V326 116 aa7.76□□□□□ -1.17
SYNE3-205ENST00000557275 RIMKLAQ8IXN7 391 aa7.76□□□□□ -1.17
SYNE3-205ENST00000557275 GAGE2DQ9UEU5 116 aa7.76□□□□□ -1.17
SYNE3-205ENST00000557275 PTGESO14684 152 aa7.76□□□□□ -1.17
SYNE3-205ENST00000557275 GNG10P50151 68 aa7.76□□□□□ -1.17
SYNE3-205ENST00000557275 EWSR1Q01844 656 aaKnown RBP eCLIP7.76□□□□□ -1.17
SYNE3-205ENST00000557275 DNAJC30Q96LL9 226 aa7.76□□□□□ -1.17
SYNE3-205ENST00000557275 A0A1W2PR48 441 aa7.76□□□□□ -1.17
SYNE3-205ENST00000557275 ZGLP1P0C6A0 271 aa7.76□□□□□ -1.17
SYNE3-205ENST00000557275 SSMEM1Q8WWF3 244 aa7.76□□□□□ -1.17
SYNE3-205ENST00000557275 HMX2A2RU54 273 aa7.76□□□□□ -1.17
SYNE3-205ENST00000557275 SEC11AP67812 179 aa7.76□□□□□ -1.17
SYNE3-205ENST00000557275 B4GALNT1Q00973 533 aa7.76□□□□□ -1.17
SYNE3-205ENST00000557275 ZNF415Q09FC8 603 aa7.76□□□□□ -1.17
SYNE3-205ENST00000557275 NUDT8Q8WV74 236 aa7.76□□□□□ -1.17
SYNE3-205ENST00000557275 LINC00615Q96LM1 132 aaPredicted RBP7.76□□□□□ -1.17
SYNE3-205ENST00000557275 CISD1Q9NZ45 108 aaKnown RBP7.76□□□□□ -1.17
SYNE3-205ENST00000557275 ARAP2Q8WZ64 1704 aa7.76□□□□□ -1.17
SYNE3-205ENST00000557275 SOX4Q06945 474 aaPredicted RBP7.76□□□□□ -1.17
SYNE3-205ENST00000557275 ATXN8Q156A1 80 aa7.76□□□□□ -1.17
SYNE3-205ENST00000557275 TMEM95Q3KNT9 176 aa7.76□□□□□ -1.17
SYNE3-205ENST00000557275 NT5CQ8TCD5 201 aa7.76□□□□□ -1.17
SYNE3-205ENST00000557275 OR51B2Q9Y5P1 312 aa7.76□□□□□ -1.17
SYNE3-205ENST00000557275 BTAF1O14981 1849 aa7.76□□□□□ -1.17
SYNE3-205ENST00000557275 FAM106CPP0CH98 169 aa7.76□□□□□ -1.17
SYNE3-205ENST00000557275 C12orf73Q69YU5 71 aa7.76□□□□□ -1.17
SYNE3-205ENST00000557275 HIST1H2BAQ96A08 127 aa7.76□□□□□ -1.17
SYNE3-205ENST00000557275 ANKRD10Q9NXR5 420 aa7.76□□□□□ -1.17
SYNE3-205ENST00000557275 SLC25A15Q9Y619 301 aa7.76□□□□□ -1.17
SYNE3-205ENST00000557275 TSPAN2O60636 221 aa7.76□□□□□ -1.17
SYNE3-205ENST00000557275 MRPL52Q86TS9 123 aaKnown RBP7.76□□□□□ -1.17
SYNE3-205ENST00000557275 DTX2Q86UW9 622 aa7.76□□□□□ -1.17
SYNE3-205ENST00000557275 LINC00869P0C866 280 aa7.76□□□□□ -1.17
SYNE3-205ENST00000557275 MPLP40238 635 aa7.76□□□□□ -1.17
SYNE3-205ENST00000557275 UCNP55089 124 aa7.76□□□□□ -1.17
SYNE3-205ENST00000557275 TMEM177Q53S58 311 aa7.76□□□□□ -1.17
SYNE3-205ENST00000557275 NR2C2APQ86WQ0 139 aa7.76□□□□□ -1.17
SYNE3-205ENST00000557275 SPRY3O43610 288 aa7.76□□□□□ -1.17
SYNE3-205ENST00000557275 SPSB4Q96A44 273 aa7.76□□□□□ -1.17
SYNE3-205ENST00000557275 ELOVL5Q9NYP7 299 aa7.76□□□□□ -1.17
SYNE3-205ENST00000557275 SIGLEC7Q9Y286 467 aa7.76□□□□□ -1.17
SYNE3-205ENST00000557275 TRPM7Q96QT4 1865 aa7.75□□□□□ -1.17
SYNE3-205ENST00000557275 TRAV8-4A0A0B4J246 113 aa7.75□□□□□ -1.17
SYNE3-205ENST00000557275 FCGR2BP31994 310 aaPredicted RBP7.75□□□□□ -1.17
SYNE3-205ENST00000557275 POLR2GP62487 172 aaKnown RBP eCLIP7.75□□□□□ -1.17
SYNE3-205ENST00000557275 ISXQ2M1V0 245 aa7.75□□□□□ -1.17
SYNE3-205ENST00000557275 SHISA5Q8N114 240 aa7.75□□□□□ -1.17
SYNE3-205ENST00000557275 FBXO17Q96EF6 278 aa7.75□□□□□ -1.17
SYNE3-205ENST00000557275 ATAD5Q96QE3 1844 aa7.75□□□□□ -1.17
SYNE3-205ENST00000557275 ABCA2Q9BZC7 2435 aa7.75□□□□□ -1.17
SYNE3-205ENST00000557275 LINC01553A4QN01 128 aa7.75□□□□□ -1.17
SYNE3-205ENST00000557275 CEACAM18A8MTB9 384 aa7.75□□□□□ -1.17
SYNE3-205ENST00000557275 SPRED3Q2MJR0 410 aa7.75□□□□□ -1.17
SYNE3-205ENST00000557275 HMGCLL1Q8TB92 370 aa7.75□□□□□ -1.17
SYNE3-205ENST00000557275 CHST5Q9GZS9 411 aa7.75□□□□□ -1.17
SYNE3-205ENST00000557275 IGKV6D-21A0A0A0MT36 114 aa7.75□□□□□ -1.17
SYNE3-205ENST00000557275 ARSAP15289 507 aa7.75□□□□□ -1.17
SYNE3-205ENST00000557275 CITED2Q99967 270 aaPredicted RBP7.75□□□□□ -1.17
SYNE3-205ENST00000557275 FAM106AQ4KMX7 169 aa7.75□□□□□ -1.17
SYNE3-205ENST00000557275 CFAP161Q6P656 301 aa7.75□□□□□ -1.17
SYNE3-205ENST00000557275 BEX4Q9NWD9 120 aaPredicted RBP7.75□□□□□ -1.17
SYNE3-205ENST00000557275 COL16A1Q07092 1604 aaPredicted RBP7.75□□□□□ -1.17
SYNE3-205ENST00000557275 C7orf71A4D174 169 aa7.75□□□□□ -1.17
SYNE3-205ENST00000557275 CA6P23280 308 aa7.75□□□□□ -1.17
SYNE3-205ENST00000557275 GPBAR1Q8TDU6 330 aa7.75□□□□□ -1.17
SYNE3-205ENST00000557275 SYT11Q9BT88 431 aa7.75□□□□□ -1.17
SYNE3-205ENST00000557275 MED29Q9NX70 200 aa7.75□□□□□ -1.17
SYNE3-205ENST00000557275 ADRA2AP08913 450 aa7.75□□□□□ -1.17
SYNE3-205ENST00000557275 ETFBKMTQ8IXQ9 262 aa7.75□□□□□ -1.17
SYNE3-205ENST00000557275 HDHD3Q9BSH5 251 aaPredicted RBP7.75□□□□□ -1.17
SYNE3-205ENST00000557275 SMOC1Q9H4F8 434 aa7.75□□□□□ -1.17
SYNE3-205ENST00000557275 FSCN3Q9NQT6 498 aa7.75□□□□□ -1.17
SYNE3-205ENST00000557275 HCRTO43612 131 aa7.75□□□□□ -1.17
SYNE3-205ENST00000557275 NDUFA2O43678 99 aa7.75□□□□□ -1.17
SYNE3-205ENST00000557275 LPAL2Q16609 132 aa7.75□□□□□ -1.17
SYNE3-205ENST00000557275 KLK8O60259 260 aa7.75□□□□□ -1.17
SYNE3-205ENST00000557275 CTSVO60911 334 aa7.75□□□□□ -1.17
SYNE3-205ENST00000557275 GPX4P36969 197 aaPredicted RBP7.75□□□□□ -1.17
SYNE3-205ENST00000557275 MRGPRDQ8TDS7 321 aa7.75□□□□□ -1.17
SYNE3-205ENST00000557275 NPFFR1Q9GZQ6 430 aa7.75□□□□□ -1.17
SYNE3-205ENST00000557275 THAP10Q9P2Z0 257 aaPredicted RBP7.75□□□□□ -1.17
SYNE3-205ENST00000557275 OTOGLQ3ZCN5 2332 aa7.74□□□□□ -1.17
SYNE3-205ENST00000557275 PUSL1Q8N0Z8 303 aaKnown RBP7.74□□□□□ -1.17
SYNE3-205ENST00000557275 MMP17Q9ULZ9 603 aa7.74□□□□□ -1.17
SYNE3-205ENST00000557275 CAMTA1Q9Y6Y1 1673 aa7.74□□□□□ -1.17
SYNE3-205ENST00000557275 PPP6CO00743 305 aa7.74□□□□□ -1.17
SYNE3-205ENST00000557275 B4GALT3O60512 393 aa7.74□□□□□ -1.17
SYNE3-205ENST00000557275 PRR35P0CG20 571 aa7.74□□□□□ -1.17
SYNE3-205ENST00000557275 ERGP11308 486 aa7.74□□□□□ -1.17
SYNE3-205ENST00000557275 PCBP3P57721 371 aaKnown RBP7.74□□□□□ -1.17
SYNE3-205ENST00000557275 PAX2Q02962 417 aa7.74□□□□□ -1.17
SYNE3-205ENST00000557275 RNF167Q9H6Y7 350 aa7.74□□□□□ -1.17
SYNE3-205ENST00000557275 PCOLCE2Q9UKZ9 415 aa7.74□□□□□ -1.17
SYNE3-205ENST00000557275 GDF9O60383 454 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms