RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 NKAIN3Q8N8D7 197 aa14.1□□□□□ -0.15
VIPAS39-209ENST00000556909 SULT4A1Q9BR01 284 aa14.1□□□□□ -0.15
VIPAS39-209ENST00000556909 UQCC2Q9BRT2 126 aa14.1□□□□□ -0.15
VIPAS39-209ENST00000556909 ST8SIA5O15466 376 aa14.09□□□□□ -0.15
VIPAS39-209ENST00000556909 EGR2P11161 476 aaPredicted RBP14.09□□□□□ -0.15
VIPAS39-209ENST00000556909 MED21Q13503 144 aa14.09□□□□□ -0.15
VIPAS39-209ENST00000556909 C10orf67Q8IYJ2 551 aa14.09□□□□□ -0.15
VIPAS39-209ENST00000556909 ABHD5Q8WTS1 349 aa14.09□□□□□ -0.15
VIPAS39-209ENST00000556909 CITED4Q96RK1 184 aa14.09□□□□□ -0.15
VIPAS39-209ENST00000556909 PALMDQ9NP74 551 aa14.09□□□□□ -0.15
VIPAS39-209ENST00000556909 GAR1Q9NY12 217 aaKnown RBP14.09□□□□□ -0.15
VIPAS39-209ENST00000556909 LCE6AA0A183 80 aa14.08□□□□□ -0.16
VIPAS39-209ENST00000556909 OR5H14A6NHG9 310 aa14.08□□□□□ -0.16
VIPAS39-209ENST00000556909 IGHV3-11P01762 117 aa14.08□□□□□ -0.16
VIPAS39-209ENST00000556909 TAS2R43P59537 309 aa14.08□□□□□ -0.16
VIPAS39-209ENST00000556909 PITPNAQ00169 270 aa14.08□□□□□ -0.16
VIPAS39-209ENST00000556909 PLGLAQ15195 96 aa14.08□□□□□ -0.16
VIPAS39-209ENST00000556909 SRSF7Q16629 238 aaKnown RBP eCLIP14.08□□□□□ -0.16
VIPAS39-209ENST00000556909 RPL39P5Q59GN2 51 aa14.08□□□□□ -0.16
VIPAS39-209ENST00000556909 PYHIN1Q6K0P9 492 aa14.08□□□□□ -0.16
VIPAS39-209ENST00000556909 CD200R1LQ6Q8B3 271 aa14.08□□□□□ -0.16
VIPAS39-209ENST00000556909 HAPLN4Q86UW8 402 aa14.08□□□□□ -0.16
VIPAS39-209ENST00000556909 IL1F10Q8WWZ1 152 aa14.08□□□□□ -0.16
VIPAS39-209ENST00000556909 TM2D3Q9BRN9 247 aa14.08□□□□□ -0.16
VIPAS39-209ENST00000556909 PIPOXQ9P0Z9 390 aa14.08□□□□□ -0.16
VIPAS39-209ENST00000556909 ABRACLQ9P1F3 81 aa14.08□□□□□ -0.16
VIPAS39-209ENST00000556909 GHRLQ9UBU3 117 aa14.08□□□□□ -0.16
VIPAS39-209ENST00000556909 STEAP1Q9UHE8 339 aa14.08□□□□□ -0.16
VIPAS39-209ENST00000556909 GAB2Q9UQC2 676 aa14.08□□□□□ -0.16
VIPAS39-209ENST00000556909 LRRC42Q9Y546 428 aa14.08□□□□□ -0.16
VIPAS39-209ENST00000556909 NUBP2Q9Y5Y2 271 aa14.08□□□□□ -0.16
VIPAS39-209ENST00000556909 H0YJW9 148 aa14.07□□□□□ -0.16
VIPAS39-209ENST00000556909 FCN1O00602 326 aa14.07□□□□□ -0.16
VIPAS39-209ENST00000556909 RAB29O14966 203 aa14.07□□□□□ -0.16
VIPAS39-209ENST00000556909 HSPB1P04792 205 aaKnown RBP14.07□□□□□ -0.16
VIPAS39-209ENST00000556909 CT45A6P0DMU7 189 aa14.07□□□□□ -0.16
VIPAS39-209ENST00000556909 CT45A5P0DMU8 189 aa14.07□□□□□ -0.16
VIPAS39-209ENST00000556909 CT45A7P0DMV0 189 aa14.07□□□□□ -0.16
VIPAS39-209ENST00000556909 ACTBL2Q562R1 376 aa14.07□□□□□ -0.16
VIPAS39-209ENST00000556909 GLDNQ6ZMI3 551 aaPredicted RBP14.07□□□□□ -0.16
VIPAS39-209ENST00000556909 C6orf201Q7Z4U5 140 aa14.07□□□□□ -0.16
VIPAS39-209ENST00000556909 SVOPQ8N4V2 548 aa14.07□□□□□ -0.16
VIPAS39-209ENST00000556909 GGHQ92820 318 aa14.07□□□□□ -0.16
VIPAS39-209ENST00000556909 FLYWCH2Q96CP2 140 aaKnown RBP14.07□□□□□ -0.16
VIPAS39-209ENST00000556909 NEDD4LQ96PU5 975 aa14.07□□□□□ -0.16
VIPAS39-209ENST00000556909 FAM103A1Q9BTL3 118 aaKnown RBP14.07□□□□□ -0.16
VIPAS39-209ENST00000556909 PARP12Q9H0J9 701 aaKnown RBP14.07□□□□□ -0.16
VIPAS39-209ENST00000556909 SLC23A1Q9UHI7 598 aa14.07□□□□□ -0.16
VIPAS39-209ENST00000556909 CELP19835 753 aa14.06□□□□□ -0.16
VIPAS39-209ENST00000556909 TPPP2P59282 170 aa14.06□□□□□ -0.16
VIPAS39-209ENST00000556909 TMEM267Q0VDI3 215 aaPredicted RBP14.06□□□□□ -0.16
VIPAS39-209ENST00000556909 ST3GAL4Q11206 333 aa14.06□□□□□ -0.16
VIPAS39-209ENST00000556909 ZFAND6Q6FIF0 208 aa14.06□□□□□ -0.16
VIPAS39-209ENST00000556909 OR10K2Q6IF99 312 aa14.06□□□□□ -0.16
VIPAS39-209ENST00000556909 UNQ5815/PRO19632Q6UWF5 114 aa14.06□□□□□ -0.16
VIPAS39-209ENST00000556909 PPP1R27Q86WC6 154 aa14.06□□□□□ -0.16
VIPAS39-209ENST00000556909 OR4C12Q96R67 309 aa14.06□□□□□ -0.16
VIPAS39-209ENST00000556909 FAAP24Q9BTP7 215 aa14.06□□□□□ -0.16
VIPAS39-209ENST00000556909 RNF150Q9ULK6 438 aa14.06□□□□□ -0.16
VIPAS39-209ENST00000556909 WASHC3Q9Y3C0 194 aa14.06□□□□□ -0.16
VIPAS39-209ENST00000556909 TNCP24821 2201 aa14.05□□□□□ -0.16
VIPAS39-209ENST00000556909 RBBP9O75884 186 aa14.05□□□□□ -0.16
VIPAS39-209ENST00000556909 NAPSAO96009 420 aa14.05□□□□□ -0.16
VIPAS39-209ENST00000556909 CD1AP06126 327 aa14.05□□□□□ -0.16
VIPAS39-209ENST00000556909 GSTP1P09211 210 aaKnown RBP14.05□□□□□ -0.16
VIPAS39-209ENST00000556909 UBBP0CG47 229 aa14.05□□□□□ -0.16
VIPAS39-209ENST00000556909 IGHV4-30-4P0DP06 118 aa14.05□□□□□ -0.16
VIPAS39-209ENST00000556909 MAPK3P27361 379 aaPredicted RBP14.05□□□□□ -0.16
VIPAS39-209ENST00000556909 AKIRIN2Q53H80 203 aa14.05□□□□□ -0.16
VIPAS39-209ENST00000556909 ZNF880Q6PDB4 577 aa14.05□□□□□ -0.16
VIPAS39-209ENST00000556909 Q8N1Y9 231 aa14.05□□□□□ -0.16
VIPAS39-209ENST00000556909 CYGBQ8WWM9 190 aa14.05□□□□□ -0.16
VIPAS39-209ENST00000556909 THRSPQ92748 146 aa14.05□□□□□ -0.16
VIPAS39-209ENST00000556909 ABHD14BQ96IU4 210 aa14.05□□□□□ -0.16
VIPAS39-209ENST00000556909 MS4A10Q96PG2 267 aa14.05□□□□□ -0.16
VIPAS39-209ENST00000556909 EFCAB10A6NFE3 127 aa14.04□□□□□ -0.16
VIPAS39-209ENST00000556909 H7C2Y5 167 aa14.04□□□□□ -0.16
VIPAS39-209ENST00000556909 LDLRAD4O15165 306 aa14.04□□□□□ -0.16
VIPAS39-209ENST00000556909 HSPA12AO43301 675 aa14.04□□□□□ -0.16
VIPAS39-209ENST00000556909 SNRPBP14678 240 aaKnown RBP14.04□□□□□ -0.16
VIPAS39-209ENST00000556909 MC5RP33032 325 aa14.04□□□□□ -0.16
VIPAS39-209ENST00000556909 RPS27AP62979 156 aaKnown RBP14.04□□□□□ -0.16
VIPAS39-209ENST00000556909 SETD9Q8NE22 299 aa14.04□□□□□ -0.16
VIPAS39-209ENST00000556909 LFNGQ8NES3 379 aa14.04□□□□□ -0.16
VIPAS39-209ENST00000556909 OR5AN1Q8NGI8 311 aa14.04□□□□□ -0.16
VIPAS39-209ENST00000556909 RHOVQ96L33 236 aa14.04□□□□□ -0.16
VIPAS39-209ENST00000556909 CLCC1Q96S66 551 aa14.04□□□□□ -0.16
VIPAS39-209ENST00000556909 NICN1Q9BSH3 213 aa14.04□□□□□ -0.16
VIPAS39-209ENST00000556909 TMEM59Q9BXS4 323 aa14.04□□□□□ -0.16
VIPAS39-209ENST00000556909 KCNK15Q9H427 330 aa14.04□□□□□ -0.16
VIPAS39-209ENST00000556909 SLA2Q9H6Q3 261 aa14.04□□□□□ -0.16
VIPAS39-209ENST00000556909 EDA2RQ9HAV5 297 aa14.04□□□□□ -0.16
VIPAS39-209ENST00000556909 CNOT2Q9NZN8 540 aaKnown RBP14.04□□□□□ -0.16
VIPAS39-209ENST00000556909 METTL1Q9UBP6 276 aaKnown RBP14.04□□□□□ -0.16
VIPAS39-209ENST00000556909 STUB1Q9UNE7 303 aa14.04□□□□□ -0.16
VIPAS39-209ENST00000556909 BIRC6Q9NR09 4857 aa14.03□□□□□ -0.16
VIPAS39-209ENST00000556909 MYL12BO14950 172 aa14.03□□□□□ -0.16
VIPAS39-209ENST00000556909 ARPC1BO15143 372 aaKnown RBP14.03□□□□□ -0.16
VIPAS39-209ENST00000556909 CA2P00918 260 aa14.03□□□□□ -0.16
VIPAS39-209ENST00000556909 IGLV1-51P01701 117 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms