RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 OR9G4Q8NGQ1 327 aa6.88□□□□□ -1.31
HNRNPC-227ENST00000556897 MRPS24Q96EL2 167 aaKnown RBP6.88□□□□□ -1.31
HNRNPC-227ENST00000556897 RDH12Q96NR8 316 aa6.88□□□□□ -1.31
HNRNPC-227ENST00000556897 HIPK2Q9H2X6 1198 aa6.88□□□□□ -1.31
HNRNPC-227ENST00000556897 IFI27L2Q9H2X8 130 aa6.88□□□□□ -1.31
HNRNPC-227ENST00000556897 SLA2Q9H6Q3 261 aa6.88□□□□□ -1.31
HNRNPC-227ENST00000556897 RANGRFQ9HD47 186 aaPredicted RBP6.88□□□□□ -1.31
HNRNPC-227ENST00000556897 AMBNQ9NP70 447 aa6.88□□□□□ -1.31
HNRNPC-227ENST00000556897 MBNL3Q9NUK0 354 aaKnown RBP6.88□□□□□ -1.31
HNRNPC-227ENST00000556897 KCNIP1Q9NZI2 227 aa6.88□□□□□ -1.31
HNRNPC-227ENST00000556897 JPT1Q9UK76 154 aa6.88□□□□□ -1.31
HNRNPC-227ENST00000556897 PEX16Q9Y5Y5 336 aa6.88□□□□□ -1.31
HNRNPC-227ENST00000556897 CEPT1Q9Y6K0 416 aa6.88□□□□□ -1.31
HNRNPC-227ENST00000556897 PCLOQ9Y6V0 5065 aa6.88□□□□□ -1.31
HNRNPC-227ENST00000556897 UBE2QL1A1L167 161 aa6.87□□□□□ -1.31
HNRNPC-227ENST00000556897 ANKRD34BA5PLL1 514 aa6.87□□□□□ -1.31
HNRNPC-227ENST00000556897 LCE2BO14633 110 aa6.87□□□□□ -1.31
HNRNPC-227ENST00000556897 YPEL1O60688 119 aa6.87□□□□□ -1.31
HNRNPC-227ENST00000556897 CA11O75493 328 aa6.87□□□□□ -1.31
HNRNPC-227ENST00000556897 SC5DO75845 299 aa6.87□□□□□ -1.31
HNRNPC-227ENST00000556897 FADS2O95864 444 aaKnown RBP6.87□□□□□ -1.31
HNRNPC-227ENST00000556897 TFAP2AP05549 437 aa6.87□□□□□ -1.31
HNRNPC-227ENST00000556897 SNRPBP14678 240 aaKnown RBP6.87□□□□□ -1.31
HNRNPC-227ENST00000556897 SYNJ2BPP57105 145 aa6.87□□□□□ -1.31
HNRNPC-227ENST00000556897 KLF5Q13887 457 aaPredicted RBP6.87□□□□□ -1.31
HNRNPC-227ENST00000556897 GPR176Q14439 515 aa6.87□□□□□ -1.31
HNRNPC-227ENST00000556897 ZIK1Q3SY52 487 aaPredicted RBP6.87□□□□□ -1.31
HNRNPC-227ENST00000556897 GLDNQ6ZMI3 551 aaPredicted RBP6.87□□□□□ -1.31
HNRNPC-227ENST00000556897 OR2AK2Q8NG84 335 aa6.87□□□□□ -1.31
HNRNPC-227ENST00000556897 MUL1Q969V5 352 aa6.87□□□□□ -1.31
HNRNPC-227ENST00000556897 CENPNQ96H22 339 aaPredicted RBP6.87□□□□□ -1.31
HNRNPC-227ENST00000556897 YPEL2Q96QA6 119 aa6.87□□□□□ -1.31
HNRNPC-227ENST00000556897 CLCC1Q96S66 551 aa6.87□□□□□ -1.31
HNRNPC-227ENST00000556897 BANF2Q9H503 90 aa6.87□□□□□ -1.31
HNRNPC-227ENST00000556897 PLEKHA3Q9HB20 300 aa6.87□□□□□ -1.31
HNRNPC-227ENST00000556897 ZNF355PQ9NSJ1 428 aa6.87□□□□□ -1.31
HNRNPC-227ENST00000556897 C13orf42A0A1B0GVH6 325 aa6.86□□□□□ -1.31
HNRNPC-227ENST00000556897 IZUMO1RA6ND01 250 aa6.86□□□□□ -1.31
HNRNPC-227ENST00000556897 H7C2Y5 167 aa6.86□□□□□ -1.31
HNRNPC-227ENST00000556897 CA2P00918 260 aa6.86□□□□□ -1.31
HNRNPC-227ENST00000556897 ALPLP05186 524 aa6.86□□□□□ -1.31
HNRNPC-227ENST00000556897 GSTP1P09211 210 aaKnown RBP6.86□□□□□ -1.31
HNRNPC-227ENST00000556897 CT45A6P0DMU7 189 aa6.86□□□□□ -1.31
HNRNPC-227ENST00000556897 CT45A5P0DMU8 189 aa6.86□□□□□ -1.31
HNRNPC-227ENST00000556897 CT45A7P0DMV0 189 aa6.86□□□□□ -1.31
HNRNPC-227ENST00000556897 GABRB1P18505 474 aa6.86□□□□□ -1.31
HNRNPC-227ENST00000556897 HTD2P86397 168 aa6.86□□□□□ -1.31
HNRNPC-227ENST00000556897 RPL39P5Q59GN2 51 aa6.86□□□□□ -1.31
HNRNPC-227ENST00000556897 RNLSQ5VYX0 342 aa6.86□□□□□ -1.31
HNRNPC-227ENST00000556897 SIGIRRQ6IA17 410 aa6.86□□□□□ -1.31
HNRNPC-227ENST00000556897 LCN12Q6JVE5 192 aa6.86□□□□□ -1.31
HNRNPC-227ENST00000556897 GLIPR1L1Q6UWM5 242 aa6.86□□□□□ -1.31
HNRNPC-227ENST00000556897 ZNF562Q6V9R5 426 aa6.86□□□□□ -1.31
HNRNPC-227ENST00000556897 LINC00322Q6ZN03 302 aaPredicted RBP6.86□□□□□ -1.31
HNRNPC-227ENST00000556897 ZNF554Q86TJ5 538 aa6.86□□□□□ -1.31
HNRNPC-227ENST00000556897 OR52I1Q8NGK6 324 aa6.86□□□□□ -1.31
HNRNPC-227ENST00000556897 OR13C5Q8NGS8 318 aa6.86□□□□□ -1.31
HNRNPC-227ENST00000556897 GRPEL2Q8TAA5 225 aa6.86□□□□□ -1.31
HNRNPC-227ENST00000556897 MRPL30Q8TCC3 161 aaKnown RBP6.86□□□□□ -1.31
HNRNPC-227ENST00000556897 LINC00476Q8WZB0 136 aa6.86□□□□□ -1.31
HNRNPC-227ENST00000556897 GALMQ96C23 342 aa6.86□□□□□ -1.31
HNRNPC-227ENST00000556897 SELENOIQ9C0D9 397 aa6.86□□□□□ -1.31
HNRNPC-227ENST00000556897 METTL1Q9UBP6 276 aaKnown RBP6.86□□□□□ -1.31
HNRNPC-227ENST00000556897 ADAM30Q9UKF2 790 aa6.86□□□□□ -1.31
HNRNPC-227ENST00000556897 GMPPBQ9Y5P6 360 aa6.86□□□□□ -1.31
HNRNPC-227ENST00000556897 HERC2O95714 4834 aa6.86□□□□□ -1.31
HNRNPC-227ENST00000556897 TRAV8-7A0A075B6U6 113 aa6.85□□□□□ -1.31
HNRNPC-227ENST00000556897 SHISA3A0PJX4 238 aa6.85□□□□□ -1.31
HNRNPC-227ENST00000556897 RBMY1BA6NDE4 496 aaKnown RBP6.85□□□□□ -1.31
HNRNPC-227ENST00000556897 RBMY1EA6NEQ0 496 aaKnown RBP6.85□□□□□ -1.31
HNRNPC-227ENST00000556897 OR5H14A6NHG9 310 aa6.85□□□□□ -1.31
HNRNPC-227ENST00000556897 ANKRD65E5RJM6 399 aa6.85□□□□□ -1.31
HNRNPC-227ENST00000556897 H0YJW9 148 aa6.85□□□□□ -1.31
HNRNPC-227ENST00000556897 EI24O14681 340 aa6.85□□□□□ -1.31
HNRNPC-227ENST00000556897 RAB29O14966 203 aa6.85□□□□□ -1.31
HNRNPC-227ENST00000556897 SLC25A17O43808 307 aa6.85□□□□□ -1.31
HNRNPC-227ENST00000556897 BRI3O95415 125 aa6.85□□□□□ -1.31
HNRNPC-227ENST00000556897 BAG2O95816 211 aa6.85□□□□□ -1.31
HNRNPC-227ENST00000556897 LY6G6CO95867 125 aa6.85□□□□□ -1.31
HNRNPC-227ENST00000556897 CSN3P07498 182 aa6.85□□□□□ -1.31
HNRNPC-227ENST00000556897 RBMY1DP0C7P1 496 aaKnown RBP6.85□□□□□ -1.31
HNRNPC-227ENST00000556897 LIMS3P0CW19 117 aa6.85□□□□□ -1.31
HNRNPC-227ENST00000556897 LIMS4P0CW20 117 aa6.85□□□□□ -1.31
HNRNPC-227ENST00000556897 MGMTP16455 207 aa6.85□□□□□ -1.31
HNRNPC-227ENST00000556897 IGFBP3P17936 291 aaPredicted RBP6.85□□□□□ -1.31
HNRNPC-227ENST00000556897 FUT3P21217 361 aa6.85□□□□□ -1.31
HNRNPC-227ENST00000556897 DEFA5Q01523 94 aa6.85□□□□□ -1.31
HNRNPC-227ENST00000556897 CCDC58Q4VC31 144 aa6.85□□□□□ -1.31
HNRNPC-227ENST00000556897 LY6G6FQ5SQ64 297 aa6.85□□□□□ -1.31
HNRNPC-227ENST00000556897 C1orf146Q5VVC0 180 aa6.85□□□□□ -1.31
HNRNPC-227ENST00000556897 DMKNQ6E0U4 476 aaPredicted RBP6.85□□□□□ -1.31
HNRNPC-227ENST00000556897 AWAT2Q6E213 333 aa6.85□□□□□ -1.31
HNRNPC-227ENST00000556897 FAM71F2Q6NXP2 309 aa6.85□□□□□ -1.31
HNRNPC-227ENST00000556897 RPL22L1Q6P5R6 122 aaKnown RBP6.85□□□□□ -1.31
HNRNPC-227ENST00000556897 Q8N402 240 aa6.85□□□□□ -1.31
HNRNPC-227ENST00000556897 JAGN1Q8N5M9 183 aa6.85□□□□□ -1.31
HNRNPC-227ENST00000556897 POC5Q8NA72 575 aa6.85□□□□□ -1.31
HNRNPC-227ENST00000556897 OR5T1Q8NG75 326 aa6.85□□□□□ -1.31
HNRNPC-227ENST00000556897 IL1F10Q8WWZ1 152 aa6.85□□□□□ -1.31
HNRNPC-227ENST00000556897 PIPOXQ9P0Z9 390 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms