RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 RAB11BQ15907 218 aa8.27□□□□□ -1.09
SPTLC2-205ENST00000556607 ECSCRQ19T08 205 aa8.27□□□□□ -1.09
SPTLC2-205ENST00000556607 ZNF260Q3ZCT1 412 aa8.27□□□□□ -1.09
SPTLC2-205ENST00000556607 RPL39P5Q59GN2 51 aa8.27□□□□□ -1.09
SPTLC2-205ENST00000556607 C11orf87Q6NUJ2 197 aa8.27□□□□□ -1.09
SPTLC2-205ENST00000556607 GLDNQ6ZMI3 551 aaPredicted RBP8.27□□□□□ -1.09
SPTLC2-205ENST00000556607 ZNF833PQ6ZTB9 187 aa8.27□□□□□ -1.09
SPTLC2-205ENST00000556607 MOB1BQ7L9L4 216 aa8.27□□□□□ -1.09
SPTLC2-205ENST00000556607 SVOPQ8N4V2 548 aa8.27□□□□□ -1.09
SPTLC2-205ENST00000556607 C4orf3Q8WVX3 66 aa8.27□□□□□ -1.09
SPTLC2-205ENST00000556607 ABHD14BQ96IU4 210 aa8.27□□□□□ -1.09
SPTLC2-205ENST00000556607 CLCC1Q96S66 551 aa8.27□□□□□ -1.09
SPTLC2-205ENST00000556607 CHCHD6Q9BRQ6 235 aa8.27□□□□□ -1.09
SPTLC2-205ENST00000556607 HDHD3Q9BSH5 251 aaPredicted RBP8.27□□□□□ -1.09
SPTLC2-205ENST00000556607 TM2D1Q9BX74 207 aa8.27□□□□□ -1.09
SPTLC2-205ENST00000556607 LPAR5Q9H1C0 372 aa8.27□□□□□ -1.09
SPTLC2-205ENST00000556607 RIMS4Q9H426 269 aaPredicted RBP8.27□□□□□ -1.09
SPTLC2-205ENST00000556607 FBXL15Q9H469 300 aa8.27□□□□□ -1.09
SPTLC2-205ENST00000556607 AK3Q9UIJ7 227 aa8.27□□□□□ -1.09
SPTLC2-205ENST00000556607 A3GALT2U3KPV4 340 aa8.27□□□□□ -1.09
SPTLC2-205ENST00000556607 A0A0A6YYD4 124 aa8.26□□□□□ -1.09
SPTLC2-205ENST00000556607 IGHV7-81A0A0B4J1V7 117 aa8.26□□□□□ -1.09
SPTLC2-205ENST00000556607 SLC17A2O00624 439 aa8.26□□□□□ -1.09
SPTLC2-205ENST00000556607 HLA-DRB1P01911 266 aa8.26□□□□□ -1.09
SPTLC2-205ENST00000556607 CALRP27797 417 aaKnown RBP8.26□□□□□ -1.09
SPTLC2-205ENST00000556607 PSMB8P28062 276 aa8.26□□□□□ -1.09
SPTLC2-205ENST00000556607 CLDN12P56749 244 aa8.26□□□□□ -1.09
SPTLC2-205ENST00000556607 HLA-DRB3P79483 266 aa8.26□□□□□ -1.09
SPTLC2-205ENST00000556607 CFHR3Q02985 330 aa8.26□□□□□ -1.09
SPTLC2-205ENST00000556607 C5orf64Q2M2E5 130 aa8.26□□□□□ -1.09
SPTLC2-205ENST00000556607 LY6G6FQ5SQ64 297 aa8.26□□□□□ -1.09
SPTLC2-205ENST00000556607 FAM71F2Q6NXP2 309 aa8.26□□□□□ -1.09
SPTLC2-205ENST00000556607 OR1N2Q8NGR9 330 aa8.26□□□□□ -1.09
SPTLC2-205ENST00000556607 NRG4Q8WWG1 115 aa8.26□□□□□ -1.09
SPTLC2-205ENST00000556607 EDARADDQ8WWZ3 215 aa8.26□□□□□ -1.09
SPTLC2-205ENST00000556607 PRR25Q96S07 402 aa8.26□□□□□ -1.09
SPTLC2-205ENST00000556607 CMSS1Q9BQ75 279 aaKnown RBP8.26□□□□□ -1.09
SPTLC2-205ENST00000556607 KLK15Q9H2R5 256 aa8.26□□□□□ -1.09
SPTLC2-205ENST00000556607 IFI27L2Q9H2X8 130 aa8.26□□□□□ -1.09
SPTLC2-205ENST00000556607 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.26□□□□□ -1.09
SPTLC2-205ENST00000556607 OR1A1Q9P1Q5 309 aa8.26□□□□□ -1.09
SPTLC2-205ENST00000556607 ZNF221Q9UK13 617 aa8.26□□□□□ -1.09
SPTLC2-205ENST00000556607 RNF150Q9ULK6 438 aa8.26□□□□□ -1.09
SPTLC2-205ENST00000556607 MGAT4AQ9UM21 535 aa8.26□□□□□ -1.09
SPTLC2-205ENST00000556607 VSIG4Q9Y279 399 aa8.26□□□□□ -1.09
SPTLC2-205ENST00000556607 DENRO43583 198 aaKnown RBP8.25□□□□□ -1.09
SPTLC2-205ENST00000556607 NAPSAO96009 420 aa8.25□□□□□ -1.09
SPTLC2-205ENST00000556607 SCTP09683 121 aa8.25□□□□□ -1.09
SPTLC2-205ENST00000556607 OR8U8P0C7N1 319 aa8.25□□□□□ -1.09
SPTLC2-205ENST00000556607 CT45A6P0DMU7 189 aa8.25□□□□□ -1.09
SPTLC2-205ENST00000556607 CT45A5P0DMU8 189 aa8.25□□□□□ -1.09
SPTLC2-205ENST00000556607 CT45A7P0DMV0 189 aa8.25□□□□□ -1.09
SPTLC2-205ENST00000556607 CPEP16870 476 aa8.25□□□□□ -1.09
SPTLC2-205ENST00000556607 PSMA1P25786 263 aaKnown RBP8.25□□□□□ -1.09
SPTLC2-205ENST00000556607 MC5RP33032 325 aa8.25□□□□□ -1.09
SPTLC2-205ENST00000556607 RANBP1P43487 201 aa8.25□□□□□ -1.09
SPTLC2-205ENST00000556607 RAB9AP51151 201 aa8.25□□□□□ -1.09
SPTLC2-205ENST00000556607 QRFPP83859 136 aa8.25□□□□□ -1.09
SPTLC2-205ENST00000556607 MLLT11Q13015 90 aaPredicted RBP8.25□□□□□ -1.09
SPTLC2-205ENST00000556607 IRF3Q14653 427 aa8.25□□□□□ -1.09
SPTLC2-205ENST00000556607 C2orf76Q3KRA6 126 aa8.25□□□□□ -1.09
SPTLC2-205ENST00000556607 HES5Q5TA89 166 aa8.25□□□□□ -1.09
SPTLC2-205ENST00000556607 ZNF880Q6PDB4 577 aa8.25□□□□□ -1.09
SPTLC2-205ENST00000556607 TMEM91Q6ZNR0 172 aa8.25□□□□□ -1.09
SPTLC2-205ENST00000556607 ZNF491Q8N8L2 437 aa8.25□□□□□ -1.09
SPTLC2-205ENST00000556607 RNF152Q8N8N0 203 aa8.25□□□□□ -1.09
SPTLC2-205ENST00000556607 DRAXINQ8NBI3 349 aaPredicted RBP8.25□□□□□ -1.09
SPTLC2-205ENST00000556607 NPBQ8NG41 125 aa8.25□□□□□ -1.09
SPTLC2-205ENST00000556607 ARHGAP5-AS1Q96IT6 56 aa8.25□□□□□ -1.09
SPTLC2-205ENST00000556607 UBE2E2Q96LR5 201 aa8.25□□□□□ -1.09
SPTLC2-205ENST00000556607 CNBD2Q96M20 576 aa8.25□□□□□ -1.09
SPTLC2-205ENST00000556607 MGLLQ99685 303 aa8.25□□□□□ -1.09
SPTLC2-205ENST00000556607 B9D2Q9BPU9 175 aa8.25□□□□□ -1.09
SPTLC2-205ENST00000556607 PECRQ9BY49 303 aa8.25□□□□□ -1.09
SPTLC2-205ENST00000556607 PARP12Q9H0J9 701 aaKnown RBP8.25□□□□□ -1.09
SPTLC2-205ENST00000556607 VCX3BQ9H321 246 aa8.25□□□□□ -1.09
SPTLC2-205ENST00000556607 ISYNA1Q9NPH2 558 aa8.25□□□□□ -1.09
SPTLC2-205ENST00000556607 WASHC3Q9Y3C0 194 aa8.25□□□□□ -1.09
SPTLC2-205ENST00000556607 V9GY05 133 aa8.25□□□□□ -1.09
SPTLC2-205ENST00000556607 NOTCH3Q9UM47 2321 aa8.24□□□□□ -1.09
SPTLC2-205ENST00000556607 OR5H14A6NHG9 310 aa8.24□□□□□ -1.09
SPTLC2-205ENST00000556607 RRHO14718 337 aa8.24□□□□□ -1.09
SPTLC2-205ENST00000556607 NDUFA3O95167 84 aa8.24□□□□□ -1.09
SPTLC2-205ENST00000556607 CD40LGP29965 261 aa8.24□□□□□ -1.09
SPTLC2-205ENST00000556607 PPIFP30405 207 aaKnown RBP8.24□□□□□ -1.09
SPTLC2-205ENST00000556607 MAP2K4P45985 399 aa8.24□□□□□ -1.09
SPTLC2-205ENST00000556607 RPS16P62249 146 aaKnown RBP8.24□□□□□ -1.09
SPTLC2-205ENST00000556607 FABP5Q01469 135 aa8.24□□□□□ -1.09
SPTLC2-205ENST00000556607 ZNF616Q08AN1 781 aa8.24□□□□□ -1.09
SPTLC2-205ENST00000556607 TMEM267Q0VDI3 215 aaPredicted RBP8.24□□□□□ -1.09
SPTLC2-205ENST00000556607 TPBGQ13641 420 aa8.24□□□□□ -1.09
SPTLC2-205ENST00000556607 ZNF660Q6AZW8 331 aaPredicted RBP8.24□□□□□ -1.09
SPTLC2-205ENST00000556607 UNQ5815/PRO19632Q6UWF5 114 aa8.24□□□□□ -1.09
SPTLC2-205ENST00000556607 OR56B1Q8NGI3 324 aa8.24□□□□□ -1.09
SPTLC2-205ENST00000556607 CASTOR1Q8WTX7 329 aa8.24□□□□□ -1.09
SPTLC2-205ENST00000556607 FAM3DQ96BQ1 224 aa8.24□□□□□ -1.09
SPTLC2-205ENST00000556607 GFI1Q99684 422 aa8.24□□□□□ -1.09
SPTLC2-205ENST00000556607 FAM103A1Q9BTL3 118 aaKnown RBP8.24□□□□□ -1.09
SPTLC2-205ENST00000556607 C11orf54Q9H0W9 315 aaPredicted RBP8.24□□□□□ -1.09
SPTLC2-205ENST00000556607 GHITMQ9H3K2 345 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms