RNA–Protein interactions for RNA: ENST00000556507.1

TGFB3-205, Transcript of transforming growth factor beta 3, humanhuman

TSL 3

Gene TGFB3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-205ENST00000556507 PRELID1Q9Y255 219 aa3.37□□□□□ -1.87
TGFB3-205ENST00000556507 RCL1Q9Y2P8 373 aaKnown RBP3.37□□□□□ -1.87
TGFB3-205ENST00000556507 POLDIP2Q9Y2S7 368 aa3.37□□□□□ -1.87
TGFB3-205ENST00000556507 OR2W1Q9Y3N9 320 aa3.37□□□□□ -1.87
TGFB3-205ENST00000556507 CHTOPQ9Y3Y2 248 aaKnown RBP3.37□□□□□ -1.87
TGFB3-205ENST00000556507 EML6Q6ZMW3 1958 aa3.37□□□□□ -1.87
TGFB3-205ENST00000556507 TRAV24A0A0B4J272 114 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 A0A1W2PNU3 283 aaPredicted RBP3.36□□□□□ -1.87
TGFB3-205ENST00000556507 FAM24AA6NFZ4 105 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 TMEM210A6NLX4 147 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 WRBO00258 174 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 HSD17B6O14756 317 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 HS3ST1O14792 307 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 SH2D1BO14796 132 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 KLK10O43240 276 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 DFFBO76075 338 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 PRH1P02810 166 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 IGKV2-30P06310 120 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 SERPINE2P07093 398 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 SFTA3P0C7M3 94 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 CCL2P13500 99 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 CEACAM1P13688 526 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 ADCYAP1P18509 176 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 F2RP25116 425 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 PAX6P26367 422 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 CD80P33681 288 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 CD200P41217 278 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 WNT5AP41221 380 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 FOXG1P55316 489 aaPredicted RBP3.36□□□□□ -1.87
TGFB3-205ENST00000556507 RAB2AP61019 212 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 UBE2NP61088 152 aaKnown RBP3.36□□□□□ -1.87
TGFB3-205ENST00000556507 POLR2GP62487 172 aaKnown RBP eCLIP3.36□□□□□ -1.87
TGFB3-205ENST00000556507 RPL23AP62750 156 aaKnown RBP3.36□□□□□ -1.87
TGFB3-205ENST00000556507 ARG2P78540 354 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 HLA-DRB3P79483 266 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 EWSR1Q01844 656 aaKnown RBP eCLIP3.36□□□□□ -1.87
TGFB3-205ENST00000556507 RELQ04864 619 aaPredicted RBP3.36□□□□□ -1.87
TGFB3-205ENST00000556507 ZNF146Q15072 292 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 OR8G1Q15617 311 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 TRIP6Q15654 476 aaKnown RBP3.36□□□□□ -1.87
TGFB3-205ENST00000556507 GABRA6Q16445 453 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 GUK1Q16774 197 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 RNF212Q495C1 297 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 NMSQ5H8A3 153 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 ZNF766Q5HY98 468 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 ZNF324BQ6AW86 544 aaPredicted RBP3.36□□□□□ -1.87
TGFB3-205ENST00000556507 Q6P435 159 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 DHRS13Q6UX07 377 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 DPPA3Q6W0C5 159 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 ZNF818PQ6ZRF7 136 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 MOB1BQ7L9L4 216 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 P4HA3Q7Z4N8 544 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 MDP1Q86V88 176 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 C1orf174Q8IYL3 243 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 H1FOOQ8IZA3 346 aaPredicted RBP3.36□□□□□ -1.87
TGFB3-205ENST00000556507 GAPTQ8N292 157 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 TMEM252Q8N6L7 170 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 C15orf54Q8N8G6 183 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 OR10V1Q8NGI7 309 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 OR10Z1Q8NGY1 313 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 PRSS3P2Q8NHM4 247 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 MRPL30Q8TCC3 161 aaKnown RBP3.36□□□□□ -1.87
TGFB3-205ENST00000556507 LSM10Q969L4 123 aaKnown RBP3.36□□□□□ -1.87
TGFB3-205ENST00000556507 BSCL2Q96G97 398 aaPredicted RBP3.36□□□□□ -1.87
TGFB3-205ENST00000556507 ZNF48Q96MX3 618 aaPredicted RBP3.36□□□□□ -1.87
TGFB3-205ENST00000556507 RAB40CQ96S21 281 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 CABLES2Q9BTV7 478 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 SCRT1Q9BWW7 348 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 EIF5A2Q9GZV4 153 aaKnown RBP3.36□□□□□ -1.87
TGFB3-205ENST00000556507 DEFB127Q9H1M4 99 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 HIPK2Q9H2X6 1198 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 TMEM231Q9H6L2 316 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 ZDHHC11Q9H8X9 412 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 CDH20Q9HBT6 801 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 TMEM9BQ9NQ34 198 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 CCL28Q9NRJ3 127 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 LYRM2Q9NU23 88 aaPredicted RBP3.36□□□□□ -1.87
TGFB3-205ENST00000556507 MLXQ9UH92 298 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 IL17BQ9UHF5 180 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 ERRFI1Q9UJM3 462 aaPredicted RBP3.36□□□□□ -1.87
TGFB3-205ENST00000556507 PRELID3BQ9Y3B1 194 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 FAM96BQ9Y3D0 163 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 COL27A1Q8IZC6 1860 aaPredicted RBP3.36□□□□□ -1.87
TGFB3-205ENST00000556507 ASXL3Q9C0F0 2248 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 KIAA1549Q9HCM3 1950 aa3.36□□□□□ -1.87
TGFB3-205ENST00000556507 IGKV1D-13A0A0B4J2D9 117 aa3.35□□□□□ -1.87
TGFB3-205ENST00000556507 IGKV1-6A0A0C4DH72 117 aa3.35□□□□□ -1.87
TGFB3-205ENST00000556507 LOC102723971A0A1B0GUV8 181 aa3.35□□□□□ -1.87
TGFB3-205ENST00000556507 IGSF23A1L1A6 192 aa3.35□□□□□ -1.87
TGFB3-205ENST00000556507 FAM90A9PA6NNJ1 464 aa3.35□□□□□ -1.87
TGFB3-205ENST00000556507 COLCA2A8K830 154 aa3.35□□□□□ -1.87
TGFB3-205ENST00000556507 RNF212BA8MTL3 300 aa3.35□□□□□ -1.87
TGFB3-205ENST00000556507 IQCF6A8MYZ5 107 aa3.35□□□□□ -1.87
TGFB3-205ENST00000556507 FAM157AC9JC47 383 aa3.35□□□□□ -1.87
TGFB3-205ENST00000556507 C9JQL5 133 aa3.35□□□□□ -1.87
TGFB3-205ENST00000556507 PROB1E7EW31 1015 aa3.35□□□□□ -1.87
TGFB3-205ENST00000556507 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.35□□□□□ -1.87
TGFB3-205ENST00000556507 K7N7A8 449 aa3.35□□□□□ -1.87
TGFB3-205ENST00000556507 AGPAT2O15120 278 aa3.35□□□□□ -1.87
TGFB3-205ENST00000556507 SIGLEC5O15389 551 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms