RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 BPNT1O95861 308 aa17.59■□□□□ 0.41
ACTN1-220ENST00000556433 IGLV1-40P01703 118 aa17.59■□□□□ 0.41
ACTN1-220ENST00000556433 UCHL1P09936 223 aa17.59■□□□□ 0.41
ACTN1-220ENST00000556433 ZNF260Q3ZCT1 412 aa17.59■□□□□ 0.41
ACTN1-220ENST00000556433 FAM71F2Q6NXP2 309 aa17.59■□□□□ 0.41
ACTN1-220ENST00000556433 FAM131AQ6UXB0 335 aa17.59■□□□□ 0.41
ACTN1-220ENST00000556433 OR6M1Q8NGM8 313 aa17.59■□□□□ 0.41
ACTN1-220ENST00000556433 TMEM203Q969S6 136 aa17.59■□□□□ 0.41
ACTN1-220ENST00000556433 OR5B12Q96R08 314 aa17.59■□□□□ 0.41
ACTN1-220ENST00000556433 RIMS4Q9H426 269 aaPredicted RBP17.59■□□□□ 0.41
ACTN1-220ENST00000556433 SLC23A1Q9UHI7 598 aa17.59■□□□□ 0.41
ACTN1-220ENST00000556433 LSM4Q9Y4Z0 139 aaKnown RBP17.59■□□□□ 0.41
ACTN1-220ENST00000556433 A0A0A6YYD4 124 aa17.58■□□□□ 0.4
ACTN1-220ENST00000556433 I3L521 148 aa17.58■□□□□ 0.4
ACTN1-220ENST00000556433 SOCS1O15524 211 aa17.58■□□□□ 0.4
ACTN1-220ENST00000556433 NDUFA3O95167 84 aa17.58■□□□□ 0.4
ACTN1-220ENST00000556433 CT45A6P0DMU7 189 aa17.58■□□□□ 0.4
ACTN1-220ENST00000556433 CT45A5P0DMU8 189 aa17.58■□□□□ 0.4
ACTN1-220ENST00000556433 CT45A7P0DMV0 189 aa17.58■□□□□ 0.4
ACTN1-220ENST00000556433 RAB9AP51151 201 aa17.58■□□□□ 0.4
ACTN1-220ENST00000556433 RPL39P5Q59GN2 51 aa17.58■□□□□ 0.4
ACTN1-220ENST00000556433 LIPKQ5VXJ0 399 aa17.58■□□□□ 0.4
ACTN1-220ENST00000556433 UFD1Q92890 307 aa17.58■□□□□ 0.4
ACTN1-220ENST00000556433 LPAR5Q9H1C0 372 aa17.58■□□□□ 0.4
ACTN1-220ENST00000556433 COL7A1Q02388 2944 aa17.58■□□□□ 0.4
ACTN1-220ENST00000556433 ANKRD65E5RJM6 399 aa17.57■□□□□ 0.4
ACTN1-220ENST00000556433 OR8U8P0C7N1 319 aa17.57■□□□□ 0.4
ACTN1-220ENST00000556433 RUNX1Q01196 453 aa17.57■□□□□ 0.4
ACTN1-220ENST00000556433 IRF3Q14653 427 aa17.57■□□□□ 0.4
ACTN1-220ENST00000556433 P2RY14Q15391 338 aa17.57■□□□□ 0.4
ACTN1-220ENST00000556433 GLDNQ6ZMI3 551 aaPredicted RBP17.57■□□□□ 0.4
ACTN1-220ENST00000556433 MOB1BQ7L9L4 216 aa17.57■□□□□ 0.4
ACTN1-220ENST00000556433 MINDY2Q8NBR6 621 aa17.57■□□□□ 0.4
ACTN1-220ENST00000556433 ABHD14BQ96IU4 210 aa17.57■□□□□ 0.4
ACTN1-220ENST00000556433 WWC2-AS2Q96NR7 200 aa17.57■□□□□ 0.4
ACTN1-220ENST00000556433 URM1Q9BTM9 101 aaKnown RBP17.57■□□□□ 0.4
ACTN1-220ENST00000556433 PARP12Q9H0J9 701 aaKnown RBP17.57■□□□□ 0.4
ACTN1-220ENST00000556433 FBXL15Q9H469 300 aa17.57■□□□□ 0.4
ACTN1-220ENST00000556433 PLGRKTQ9HBL7 147 aa17.57■□□□□ 0.4
ACTN1-220ENST00000556433 AK3Q9UIJ7 227 aa17.57■□□□□ 0.4
ACTN1-220ENST00000556433 TRBV6-6A0A0A6YYG2 114 aa17.56■□□□□ 0.4
ACTN1-220ENST00000556433 NHLRC4P0CG21 123 aaPredicted RBP17.56■□□□□ 0.4
ACTN1-220ENST00000556433 ARSBP15848 533 aa17.56■□□□□ 0.4
ACTN1-220ENST00000556433 MC5RP33032 325 aa17.56■□□□□ 0.4
ACTN1-220ENST00000556433 GNB1P62873 340 aa17.56■□□□□ 0.4
ACTN1-220ENST00000556433 ZNF616Q08AN1 781 aa17.56■□□□□ 0.4
ACTN1-220ENST00000556433 ECSCRQ19T08 205 aa17.56■□□□□ 0.4
ACTN1-220ENST00000556433 ZNF660Q6AZW8 331 aaPredicted RBP17.56■□□□□ 0.4
ACTN1-220ENST00000556433 HDHD3Q9BSH5 251 aaPredicted RBP17.56■□□□□ 0.4
ACTN1-220ENST00000556433 TPRKBQ9Y3C4 175 aa17.56■□□□□ 0.4
ACTN1-220ENST00000556433 AK6Q9Y3D8 172 aaKnown RBP17.56■□□□□ 0.4
ACTN1-220ENST00000556433 OR5H14A6NHG9 310 aa17.55■□□□□ 0.4
ACTN1-220ENST00000556433 RRHO14718 337 aa17.55■□□□□ 0.4
ACTN1-220ENST00000556433 GSTP1P09211 210 aaKnown RBP17.55■□□□□ 0.4
ACTN1-220ENST00000556433 HSMCR30P0CW71 290 aa17.55■□□□□ 0.4
ACTN1-220ENST00000556433 CEACAM6P40199 344 aa17.55■□□□□ 0.4
ACTN1-220ENST00000556433 CX3CL1P78423 397 aa17.55■□□□□ 0.4
ACTN1-220ENST00000556433 PLGLAQ15195 96 aa17.55■□□□□ 0.4
ACTN1-220ENST00000556433 ASPHD1Q5U4P2 390 aa17.55■□□□□ 0.4
ACTN1-220ENST00000556433 TMEM91Q6ZNR0 172 aa17.55■□□□□ 0.4
ACTN1-220ENST00000556433 FAM89BQ8N5H3 189 aa17.55■□□□□ 0.4
ACTN1-220ENST00000556433 GFI1Q99684 422 aa17.55■□□□□ 0.4
ACTN1-220ENST00000556433 C11orf54Q9H0W9 315 aaPredicted RBP17.55■□□□□ 0.4
ACTN1-220ENST00000556433 GHITMQ9H3K2 345 aa17.55■□□□□ 0.4
ACTN1-220ENST00000556433 NKX1-2Q9UD57 310 aaPredicted RBP17.55■□□□□ 0.4
ACTN1-220ENST00000556433 FBXO7Q9Y3I1 522 aa17.55■□□□□ 0.4
ACTN1-220ENST00000556433 H0YJW9 148 aa17.54■□□□□ 0.4
ACTN1-220ENST00000556433 H7C2Y5 167 aa17.54■□□□□ 0.4
ACTN1-220ENST00000556433 FCN1O00602 326 aa17.54■□□□□ 0.4
ACTN1-220ENST00000556433 SLC17A2O00624 439 aa17.54■□□□□ 0.4
ACTN1-220ENST00000556433 ITGB1BP1O14713 200 aa17.54■□□□□ 0.4
ACTN1-220ENST00000556433 HSPA12AO43301 675 aa17.54■□□□□ 0.4
ACTN1-220ENST00000556433 ZBTB25P24278 435 aa17.54■□□□□ 0.4
ACTN1-220ENST00000556433 NDPQ00604 133 aa17.54■□□□□ 0.4
ACTN1-220ENST00000556433 TPBGQ13641 420 aa17.54■□□□□ 0.4
ACTN1-220ENST00000556433 ABHD5Q8WTS1 349 aa17.54■□□□□ 0.4
ACTN1-220ENST00000556433 AGMATQ9BSE5 352 aa17.54■□□□□ 0.4
ACTN1-220ENST00000556433 OR1A1Q9P1Q5 309 aa17.54■□□□□ 0.4
ACTN1-220ENST00000556433 ZNF256Q9Y2P7 627 aaPredicted RBP17.54■□□□□ 0.4
ACTN1-220ENST00000556433 WASHC3Q9Y3C0 194 aa17.54■□□□□ 0.4
ACTN1-220ENST00000556433 A3GALT2U3KPV4 340 aa17.54■□□□□ 0.4
ACTN1-220ENST00000556433 A0A1W2PN81 502 aa17.53■□□□□ 0.4
ACTN1-220ENST00000556433 SCTP09683 121 aa17.53■□□□□ 0.4
ACTN1-220ENST00000556433 CHRNA7P36544 502 aa17.53■□□□□ 0.4
ACTN1-220ENST00000556433 INSL3P51460 131 aa17.53■□□□□ 0.4
ACTN1-220ENST00000556433 RPS25P62851 125 aaKnown RBP17.53■□□□□ 0.4
ACTN1-220ENST00000556433 HLA-DRB3P79483 266 aa17.53■□□□□ 0.4
ACTN1-220ENST00000556433 RAB11BQ15907 218 aa17.53■□□□□ 0.4
ACTN1-220ENST00000556433 OR5AN1Q8NGI8 311 aa17.53■□□□□ 0.4
ACTN1-220ENST00000556433 EDARADDQ8WWZ3 215 aa17.53■□□□□ 0.4
ACTN1-220ENST00000556433 DCUN1D4Q92564 292 aa17.53■□□□□ 0.4
ACTN1-220ENST00000556433 DUSP21Q9H596 190 aa17.53■□□□□ 0.4
ACTN1-220ENST00000556433 Q9N2K0 584 aa17.53■□□□□ 0.4
ACTN1-220ENST00000556433 RNF150Q9ULK6 438 aa17.53■□□□□ 0.4
ACTN1-220ENST00000556433 HSF4Q9ULV5 492 aa17.53■□□□□ 0.4
ACTN1-220ENST00000556433 MGAT4AQ9UM21 535 aa17.53■□□□□ 0.4
ACTN1-220ENST00000556433 FOXA2Q9Y261 457 aaPredicted RBP17.53■□□□□ 0.4
ACTN1-220ENST00000556433 SOX15O60248 233 aa17.52■□□□□ 0.4
ACTN1-220ENST00000556433 RBBP9O75884 186 aa17.52■□□□□ 0.4
ACTN1-220ENST00000556433 ARL6IP5O75915 188 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms