RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 SAA2P0DJI9 122 aaPredicted RBP9.16□□□□□ -0.94
SLIRP-205ENST00000556310 LSAMPQ13449 338 aa9.16□□□□□ -0.94
SLIRP-205ENST00000556310 HNF4GQ14541 408 aa9.16□□□□□ -0.94
SLIRP-205ENST00000556310 ARL6IP1Q15041 203 aa9.16□□□□□ -0.94
SLIRP-205ENST00000556310 C9orf152Q5JTZ5 239 aa9.16□□□□□ -0.94
SLIRP-205ENST00000556310 ZNF833PQ6ZTB9 187 aa9.16□□□□□ -0.94
SLIRP-205ENST00000556310 OR8H1Q8NGG4 311 aa9.16□□□□□ -0.94
SLIRP-205ENST00000556310 LGALS14Q8TCE9 139 aa9.16□□□□□ -0.94
SLIRP-205ENST00000556310 CENPOQ9BU64 300 aa9.16□□□□□ -0.94
SLIRP-205ENST00000556310 RNF167Q9H6Y7 350 aa9.16□□□□□ -0.94
SLIRP-205ENST00000556310 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.16□□□□□ -0.94
SLIRP-205ENST00000556310 SLC23A1Q9UHI7 598 aa9.16□□□□□ -0.94
SLIRP-205ENST00000556310 DAPK2Q9UIK4 370 aa9.16□□□□□ -0.94
SLIRP-205ENST00000556310 TRIM64CA6NLI5 447 aa9.15□□□□□ -0.94
SLIRP-205ENST00000556310 ZNF736B4DX44 427 aaPredicted RBP9.15□□□□□ -0.94
SLIRP-205ENST00000556310 TRDCB7Z8K6 153 aa9.15□□□□□ -0.94
SLIRP-205ENST00000556310 HSPA12AO43301 675 aa9.15□□□□□ -0.94
SLIRP-205ENST00000556310 SCGNO76038 276 aa9.15□□□□□ -0.94
SLIRP-205ENST00000556310 FCGR3AP08637 254 aa9.15□□□□□ -0.94
SLIRP-205ENST00000556310 SCTP09683 121 aa9.15□□□□□ -0.94
SLIRP-205ENST00000556310 CLEC2LP0C7M8 214 aa9.15□□□□□ -0.94
SLIRP-205ENST00000556310 CD28P10747 220 aa9.15□□□□□ -0.94
SLIRP-205ENST00000556310 GNB3P16520 340 aa9.15□□□□□ -0.94
SLIRP-205ENST00000556310 ZBTB25P24278 435 aa9.15□□□□□ -0.94
SLIRP-205ENST00000556310 OR3A3P47888 321 aa9.15□□□□□ -0.94
SLIRP-205ENST00000556310 SCAND1P57086 179 aa9.15□□□□□ -0.94
SLIRP-205ENST00000556310 MXD1Q05195 221 aa9.15□□□□□ -0.94
SLIRP-205ENST00000556310 KIR2DS1Q14954 304 aa9.15□□□□□ -0.94
SLIRP-205ENST00000556310 OR4A4PQ8NGN8 299 aa9.15□□□□□ -0.94
SLIRP-205ENST00000556310 MRPL20Q9BYC9 149 aaKnown RBP9.15□□□□□ -0.94
SLIRP-205ENST00000556310 PARP12Q9H0J9 701 aaKnown RBP9.15□□□□□ -0.94
SLIRP-205ENST00000556310 ATG5Q9H1Y0 275 aa9.15□□□□□ -0.94
SLIRP-205ENST00000556310 PIPOXQ9P0Z9 390 aa9.15□□□□□ -0.94
SLIRP-205ENST00000556310 OR1A1Q9P1Q5 309 aa9.15□□□□□ -0.94
SLIRP-205ENST00000556310 A0A075B6Q4 140 aa9.14□□□□□ -0.95
SLIRP-205ENST00000556310 IGKV1-6A0A0C4DH72 117 aa9.14□□□□□ -0.95
SLIRP-205ENST00000556310 NCBP2LA6PVI3 153 aaKnown RBP9.14□□□□□ -0.95
SLIRP-205ENST00000556310 RAB29O14966 203 aa9.14□□□□□ -0.95
SLIRP-205ENST00000556310 FABP7O15540 132 aa9.14□□□□□ -0.95
SLIRP-205ENST00000556310 TMEM127O75204 238 aa9.14□□□□□ -0.95
SLIRP-205ENST00000556310 DIRAS3O95661 229 aa9.14□□□□□ -0.95
SLIRP-205ENST00000556310 SERPINB10P48595 397 aa9.14□□□□□ -0.95
SLIRP-205ENST00000556310 HIST2H2BDQ6DRA6 164 aa9.14□□□□□ -0.95
SLIRP-205ENST00000556310 NDUFA11Q86Y39 141 aa9.14□□□□□ -0.95
SLIRP-205ENST00000556310 Q8N9W7 124 aa9.14□□□□□ -0.95
SLIRP-205ENST00000556310 OR5AU1Q8NGC0 362 aa9.14□□□□□ -0.95
SLIRP-205ENST00000556310 YIPF6Q96EC8 236 aa9.14□□□□□ -0.95
SLIRP-205ENST00000556310 S1PR3Q99500 378 aa9.14□□□□□ -0.95
SLIRP-205ENST00000556310 CITED2Q99967 270 aaPredicted RBP9.14□□□□□ -0.95
SLIRP-205ENST00000556310 NABP2Q9BQ15 211 aa9.14□□□□□ -0.95
SLIRP-205ENST00000556310 ZNF251Q9BRH9 671 aa9.14□□□□□ -0.95
SLIRP-205ENST00000556310 AGMATQ9BSE5 352 aa9.14□□□□□ -0.95
SLIRP-205ENST00000556310 CABLES2Q9BTV7 478 aa9.14□□□□□ -0.95
SLIRP-205ENST00000556310 GHITMQ9H3K2 345 aa9.14□□□□□ -0.95
SLIRP-205ENST00000556310 LIN7CQ9NUP9 197 aaKnown RBP9.14□□□□□ -0.95
SLIRP-205ENST00000556310 RHBDL2Q9NX52 303 aa9.14□□□□□ -0.95
SLIRP-205ENST00000556310 ETV7Q9Y603 341 aa9.14□□□□□ -0.95
SLIRP-205ENST00000556310 AIREO43918 545 aa9.13□□□□□ -0.95
SLIRP-205ENST00000556310 IGHG2P01859 326 aa9.13□□□□□ -0.95
SLIRP-205ENST00000556310 DTYMKP23919 212 aa9.13□□□□□ -0.95
SLIRP-205ENST00000556310 TALDO1P37837 337 aa9.13□□□□□ -0.95
SLIRP-205ENST00000556310 CEACAM6P40199 344 aa9.13□□□□□ -0.95
SLIRP-205ENST00000556310 ARFRP1Q13795 201 aa9.13□□□□□ -0.95
SLIRP-205ENST00000556310 SRSF7Q16629 238 aaKnown RBP eCLIP9.13□□□□□ -0.95
SLIRP-205ENST00000556310 Q6ZS49 121 aa9.13□□□□□ -0.95
SLIRP-205ENST00000556310 SLC35E3Q7Z769 313 aa9.13□□□□□ -0.95
SLIRP-205ENST00000556310 CENPVQ7Z7K6 275 aaPredicted RBP9.13□□□□□ -0.95
SLIRP-205ENST00000556310 FAM71E2Q8N5Q1 922 aa9.13□□□□□ -0.95
SLIRP-205ENST00000556310 OR4X2Q8NGF9 303 aa9.13□□□□□ -0.95
SLIRP-205ENST00000556310 TOLLIPQ9H0E2 274 aa9.13□□□□□ -0.95
SLIRP-205ENST00000556310 C11orf54Q9H0W9 315 aaPredicted RBP9.13□□□□□ -0.95
SLIRP-205ENST00000556310 ABCG5Q9H222 651 aa9.13□□□□□ -0.95
SLIRP-205ENST00000556310 PLSCR3Q9NRY6 295 aa9.13□□□□□ -0.95
SLIRP-205ENST00000556310 PSMB11A5LHX3 300 aa9.12□□□□□ -0.95
SLIRP-205ENST00000556310 OR5H14A6NHG9 310 aa9.12□□□□□ -0.95
SLIRP-205ENST00000556310 KCNAB3O43448 404 aa9.12□□□□□ -0.95
SLIRP-205ENST00000556310 RRP9O43818 475 aaKnown RBP9.12□□□□□ -0.95
SLIRP-205ENST00000556310 OPN1MWP04001 364 aa9.12□□□□□ -0.95
SLIRP-205ENST00000556310 GSTP1P09211 210 aaKnown RBP9.12□□□□□ -0.95
SLIRP-205ENST00000556310 OPN1MW2P0DN77 364 aa9.12□□□□□ -0.95
SLIRP-205ENST00000556310 OPN1MW3P0DN78 364 aa9.12□□□□□ -0.95
SLIRP-205ENST00000556310 GPR12P47775 334 aa9.12□□□□□ -0.95
SLIRP-205ENST00000556310 CD83Q01151 205 aa9.12□□□□□ -0.95
SLIRP-205ENST00000556310 MMDQ15546 238 aa9.12□□□□□ -0.95
SLIRP-205ENST00000556310 NSUN5P1Q3KNT7 163 aa9.12□□□□□ -0.95
SLIRP-205ENST00000556310 CDNFQ49AH0 187 aa9.12□□□□□ -0.95
SLIRP-205ENST00000556310 RPL39P5Q59GN2 51 aa9.12□□□□□ -0.95
SLIRP-205ENST00000556310 IDNKQ5T6J7 187 aa9.12□□□□□ -0.95
SLIRP-205ENST00000556310 HACD4Q5VWC8 232 aa9.12□□□□□ -0.95
SLIRP-205ENST00000556310 CROCCP3Q8IVE0 287 aa9.12□□□□□ -0.95
SLIRP-205ENST00000556310 FOXRED2Q8IWF2 684 aa9.12□□□□□ -0.95
SLIRP-205ENST00000556310 FAM110DQ8TAY7 271 aaPredicted RBP9.12□□□□□ -0.95
SLIRP-205ENST00000556310 CHPT1Q8WUD6 406 aa9.12□□□□□ -0.95
SLIRP-205ENST00000556310 MAFIPQ8WZ33 124 aa9.12□□□□□ -0.95
SLIRP-205ENST00000556310 SLC25A38Q96DW6 304 aa9.12□□□□□ -0.95
SLIRP-205ENST00000556310 ABHD14BQ96IU4 210 aa9.12□□□□□ -0.95
SLIRP-205ENST00000556310 RASL11BQ9BPW5 248 aa9.12□□□□□ -0.95
SLIRP-205ENST00000556310 MRPL18Q9H0U6 180 aaKnown RBP9.12□□□□□ -0.95
SLIRP-205ENST00000556310 RDH8Q9NYR8 311 aa9.12□□□□□ -0.95
SLIRP-205ENST00000556310 ZNF230Q9UIE0 474 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms