RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 FAM46BQ96A09 425 aa11.01□□□□□ -0.65
CHMP4BP1-201ENST00000556017 RHOVQ96L33 236 aa11.01□□□□□ -0.65
CHMP4BP1-201ENST00000556017 FOXA2Q9Y261 457 aaPredicted RBP11.01□□□□□ -0.65
CHMP4BP1-201ENST00000556017 A8MZ25 164 aa11□□□□□ -0.65
CHMP4BP1-201ENST00000556017 H0YJW9 148 aa11□□□□□ -0.65
CHMP4BP1-201ENST00000556017 DYNC1I1O14576 645 aa11□□□□□ -0.65
CHMP4BP1-201ENST00000556017 CRTAPO75718 401 aaPredicted RBP11□□□□□ -0.65
CHMP4BP1-201ENST00000556017 NAPSAO96009 420 aa11□□□□□ -0.65
CHMP4BP1-201ENST00000556017 IGLV1-51P01701 117 aa11□□□□□ -0.65
CHMP4BP1-201ENST00000556017 IGHV3-11P01762 117 aa11□□□□□ -0.65
CHMP4BP1-201ENST00000556017 IGHV4-30-4P0DP06 118 aa11□□□□□ -0.65
CHMP4BP1-201ENST00000556017 ZFAND6Q6FIF0 208 aa11□□□□□ -0.65
CHMP4BP1-201ENST00000556017 OR10K2Q6IF99 312 aa11□□□□□ -0.65
CHMP4BP1-201ENST00000556017 FAM71F2Q6NXP2 309 aa11□□□□□ -0.65
CHMP4BP1-201ENST00000556017 PQLC1Q8N2U9 271 aa11□□□□□ -0.65
CHMP4BP1-201ENST00000556017 FAM103A1Q9BTL3 118 aaKnown RBP11□□□□□ -0.65
CHMP4BP1-201ENST00000556017 EXOSC1Q9Y3B2 195 aaKnown RBP11□□□□□ -0.65
CHMP4BP1-201ENST00000556017 PNMA8CA0A1B0GUJ8 204 aa10.99□□□□□ -0.65
CHMP4BP1-201ENST00000556017 OR8U9P0C7N5 309 aa10.99□□□□□ -0.65
CHMP4BP1-201ENST00000556017 CAPGP40121 348 aa10.99□□□□□ -0.65
CHMP4BP1-201ENST00000556017 LINC00205P59089 165 aa10.99□□□□□ -0.65
CHMP4BP1-201ENST00000556017 INSL4Q14641 139 aa10.99□□□□□ -0.65
CHMP4BP1-201ENST00000556017 SRSF7Q16629 238 aaKnown RBP eCLIP10.99□□□□□ -0.65
CHMP4BP1-201ENST00000556017 AKIRIN2Q53H80 203 aa10.99□□□□□ -0.65
CHMP4BP1-201ENST00000556017 IL34Q6ZMJ4 242 aa10.99□□□□□ -0.65
CHMP4BP1-201ENST00000556017 C6orf201Q7Z4U5 140 aa10.99□□□□□ -0.65
CHMP4BP1-201ENST00000556017 SVOPQ8N4V2 548 aa10.99□□□□□ -0.65
CHMP4BP1-201ENST00000556017 OR5AN1Q8NGI8 311 aa10.99□□□□□ -0.65
CHMP4BP1-201ENST00000556017 OR6Q1Q8NGQ2 317 aa10.99□□□□□ -0.65
CHMP4BP1-201ENST00000556017 GGHQ92820 318 aa10.99□□□□□ -0.65
CHMP4BP1-201ENST00000556017 THAP7Q9BT49 309 aaPredicted RBP10.99□□□□□ -0.65
CHMP4BP1-201ENST00000556017 FAAP24Q9BTP7 215 aa10.99□□□□□ -0.65
CHMP4BP1-201ENST00000556017 CST11Q9H112 138 aa10.99□□□□□ -0.65
CHMP4BP1-201ENST00000556017 KCNK15Q9H427 330 aa10.99□□□□□ -0.65
CHMP4BP1-201ENST00000556017 S100A14Q9HCY8 104 aa10.99□□□□□ -0.65
CHMP4BP1-201ENST00000556017 CKLFQ9UBR5 152 aa10.99□□□□□ -0.65
CHMP4BP1-201ENST00000556017 A3GALT2U3KPV4 340 aa10.99□□□□□ -0.65
CHMP4BP1-201ENST00000556017 A0A0A6YYD4 124 aa10.98□□□□□ -0.65
CHMP4BP1-201ENST00000556017 HSPB1P04792 205 aaKnown RBP10.98□□□□□ -0.65
CHMP4BP1-201ENST00000556017 CD37P11049 281 aa10.98□□□□□ -0.65
CHMP4BP1-201ENST00000556017 HTR2CP28335 458 aa10.98□□□□□ -0.65
CHMP4BP1-201ENST00000556017 QRFPP83859 136 aa10.98□□□□□ -0.65
CHMP4BP1-201ENST00000556017 UNC119Q13432 240 aa10.98□□□□□ -0.65
CHMP4BP1-201ENST00000556017 TCTEX1D1Q8N7M0 179 aa10.98□□□□□ -0.65
CHMP4BP1-201ENST00000556017 LFNGQ8NES3 379 aa10.98□□□□□ -0.65
CHMP4BP1-201ENST00000556017 OR2AK2Q8NG84 335 aa10.98□□□□□ -0.65
CHMP4BP1-201ENST00000556017 GALMQ96C23 342 aa10.98□□□□□ -0.65
CHMP4BP1-201ENST00000556017 TMEM80Q96HE8 168 aa10.98□□□□□ -0.65
CHMP4BP1-201ENST00000556017 ABHD14BQ96IU4 210 aa10.98□□□□□ -0.65
CHMP4BP1-201ENST00000556017 MS4A10Q96PG2 267 aa10.98□□□□□ -0.65
CHMP4BP1-201ENST00000556017 UQCC2Q9BRT2 126 aa10.98□□□□□ -0.65
CHMP4BP1-201ENST00000556017 NICN1Q9BSH3 213 aa10.98□□□□□ -0.65
CHMP4BP1-201ENST00000556017 ZMAT4Q9H898 229 aa10.98□□□□□ -0.65
CHMP4BP1-201ENST00000556017 SMPD3Q9NY59 655 aaPredicted RBP10.98□□□□□ -0.65
CHMP4BP1-201ENST00000556017 KCNIP1Q9NZI2 227 aa10.98□□□□□ -0.65
CHMP4BP1-201ENST00000556017 CNOT2Q9NZN8 540 aaKnown RBP10.98□□□□□ -0.65
CHMP4BP1-201ENST00000556017 KIAA1456Q9P272 454 aa10.98□□□□□ -0.65
CHMP4BP1-201ENST00000556017 SLC23A1Q9UHI7 598 aa10.98□□□□□ -0.65
CHMP4BP1-201ENST00000556017 ALMS1Q8TCU4 4167 aa10.98□□□□□ -0.65
CHMP4BP1-201ENST00000556017 OR5H14A6NHG9 310 aa10.97□□□□□ -0.65
CHMP4BP1-201ENST00000556017 ARPC1BO15143 372 aaKnown RBP10.97□□□□□ -0.65
CHMP4BP1-201ENST00000556017 VEGFCP49767 419 aa10.97□□□□□ -0.65
CHMP4BP1-201ENST00000556017 ST3GAL4Q11206 333 aa10.97□□□□□ -0.65
CHMP4BP1-201ENST00000556017 PSG5Q15238 335 aa10.97□□□□□ -0.65
CHMP4BP1-201ENST00000556017 ACTBL2Q562R1 376 aa10.97□□□□□ -0.65
CHMP4BP1-201ENST00000556017 ADAMTSL5Q6ZMM2 481 aa10.97□□□□□ -0.65
CHMP4BP1-201ENST00000556017 LRRTM1Q86UE6 522 aa10.97□□□□□ -0.65
CHMP4BP1-201ENST00000556017 PPP1R27Q86WC6 154 aa10.97□□□□□ -0.65
CHMP4BP1-201ENST00000556017 RAB29O14966 203 aa10.96□□□□□ -0.65
CHMP4BP1-201ENST00000556017 LDLRAD4O15165 306 aa10.96□□□□□ -0.65
CHMP4BP1-201ENST00000556017 HSPA12AO43301 675 aa10.96□□□□□ -0.65
CHMP4BP1-201ENST00000556017 RGS11O94810 467 aa10.96□□□□□ -0.65
CHMP4BP1-201ENST00000556017 IGKV1-16P04430 117 aa10.96□□□□□ -0.65
CHMP4BP1-201ENST00000556017 CD1AP06126 327 aa10.96□□□□□ -0.65
CHMP4BP1-201ENST00000556017 MYL12AP19105 171 aa10.96□□□□□ -0.65
CHMP4BP1-201ENST00000556017 CELP19835 753 aa10.96□□□□□ -0.65
CHMP4BP1-201ENST00000556017 RPS27AP62979 156 aaKnown RBP10.96□□□□□ -0.65
CHMP4BP1-201ENST00000556017 PITPNAQ00169 270 aa10.96□□□□□ -0.65
CHMP4BP1-201ENST00000556017 C1orf100Q5SVJ3 147 aa10.96□□□□□ -0.65
CHMP4BP1-201ENST00000556017 ZNF562Q6V9R5 426 aa10.96□□□□□ -0.65
CHMP4BP1-201ENST00000556017 HDHD3Q9BSH5 251 aaPredicted RBP10.96□□□□□ -0.65
CHMP4BP1-201ENST00000556017 TM2D1Q9BX74 207 aa10.96□□□□□ -0.65
CHMP4BP1-201ENST00000556017 C11orf54Q9H0W9 315 aaPredicted RBP10.96□□□□□ -0.65
CHMP4BP1-201ENST00000556017 CHCHD3Q9NX63 227 aaKnown RBP10.96□□□□□ -0.65
CHMP4BP1-201ENST00000556017 PIPOXQ9P0Z9 390 aa10.96□□□□□ -0.65
CHMP4BP1-201ENST00000556017 OR1A1Q9P1Q5 309 aa10.96□□□□□ -0.65
CHMP4BP1-201ENST00000556017 ADAM30Q9UKF2 790 aa10.96□□□□□ -0.65
CHMP4BP1-201ENST00000556017 IRGMA1A4Y4 181 aa10.95□□□□□ -0.66
CHMP4BP1-201ENST00000556017 FOXI3A8MTJ6 420 aaPredicted RBP10.95□□□□□ -0.66
CHMP4BP1-201ENST00000556017 ITGB1BP1O14713 200 aa10.95□□□□□ -0.66
CHMP4BP1-201ENST00000556017 RBMXL2O75526 392 aaKnown RBP10.95□□□□□ -0.66
CHMP4BP1-201ENST00000556017 CA2P00918 260 aa10.95□□□□□ -0.66
CHMP4BP1-201ENST00000556017 TPPP2P59282 170 aa10.95□□□□□ -0.66
CHMP4BP1-201ENST00000556017 PYHIN1Q6K0P9 492 aa10.95□□□□□ -0.66
CHMP4BP1-201ENST00000556017 UNQ5815/PRO19632Q6UWF5 114 aa10.95□□□□□ -0.66
CHMP4BP1-201ENST00000556017 NKAIN3Q8N8D7 197 aa10.95□□□□□ -0.66
CHMP4BP1-201ENST00000556017 ZNF383Q8NA42 475 aa10.95□□□□□ -0.66
CHMP4BP1-201ENST00000556017 DRAXINQ8NBI3 349 aaPredicted RBP10.95□□□□□ -0.66
CHMP4BP1-201ENST00000556017 IL1F10Q8WWZ1 152 aa10.95□□□□□ -0.66
CHMP4BP1-201ENST00000556017 FLYWCH2Q96CP2 140 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms