RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 P0C879 139 aa13.64□□□□□ -0.23
TUBB3-209ENST00000555609 MPLP40238 635 aa13.64□□□□□ -0.23
TUBB3-209ENST00000555609 NKX6-1P78426 367 aaPredicted RBP13.64□□□□□ -0.23
TUBB3-209ENST00000555609 IGFBP7Q16270 282 aa13.64□□□□□ -0.23
TUBB3-209ENST00000555609 SPANXN5Q5MJ07 72 aa13.64□□□□□ -0.23
TUBB3-209ENST00000555609 ZNF343Q6P1L6 599 aa13.64□□□□□ -0.23
TUBB3-209ENST00000555609 WDR86Q86TI4 376 aa13.64□□□□□ -0.23
TUBB3-209ENST00000555609 GMPPAQ96IJ6 420 aaPredicted RBP13.64□□□□□ -0.23
TUBB3-209ENST00000555609 CIB3Q96Q77 187 aaPredicted RBP13.64□□□□□ -0.23
TUBB3-209ENST00000555609 MAP1LC3BQ9GZQ8 125 aa13.64□□□□□ -0.23
TUBB3-209ENST00000555609 SLC39A9Q9NUM3 307 aa13.64□□□□□ -0.23
TUBB3-209ENST00000555609 NAT8Q9UHE5 227 aa13.64□□□□□ -0.23
TUBB3-209ENST00000555609 LAMA1P25391 3075 aa13.64□□□□□ -0.23
TUBB3-209ENST00000555609 DOCK10Q96BY6 2186 aa13.64□□□□□ -0.23
TUBB3-209ENST00000555609 TGIF2-C20orf24A0A0A6YYL0 155 aa13.63□□□□□ -0.23
TUBB3-209ENST00000555609 OOEPA6NGQ2 149 aa13.63□□□□□ -0.23
TUBB3-209ENST00000555609 ZNHIT1O43257 154 aa13.63□□□□□ -0.23
TUBB3-209ENST00000555609 HIST1H2BKO60814 126 aa13.63□□□□□ -0.23
TUBB3-209ENST00000555609 WDR1O75083 606 aa13.63□□□□□ -0.23
TUBB3-209ENST00000555609 HIST1H2BJP06899 126 aa13.63□□□□□ -0.23
TUBB3-209ENST00000555609 ZNF16P17020 682 aaPredicted RBP13.63□□□□□ -0.23
TUBB3-209ENST00000555609 HIST1H2BOP23527 126 aa13.63□□□□□ -0.23
TUBB3-209ENST00000555609 HIST1H2BBP33778 126 aa13.63□□□□□ -0.23
TUBB3-209ENST00000555609 HIST1H2BDP58876 126 aa13.63□□□□□ -0.23
TUBB3-209ENST00000555609 HIST1H2BCP62807 126 aa13.63□□□□□ -0.23
TUBB3-209ENST00000555609 LPAL2Q16609 132 aa13.63□□□□□ -0.23
TUBB3-209ENST00000555609 HIST2H2BEQ16778 126 aa13.63□□□□□ -0.23
TUBB3-209ENST00000555609 IZUMO4Q1ZYL8 232 aa13.63□□□□□ -0.23
TUBB3-209ENST00000555609 ZNF766Q5HY98 468 aa13.63□□□□□ -0.23
TUBB3-209ENST00000555609 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.63□□□□□ -0.23
TUBB3-209ENST00000555609 HIST1H2BHQ93079 126 aa13.63□□□□□ -0.23
TUBB3-209ENST00000555609 GALMQ96C23 342 aa13.63□□□□□ -0.23
TUBB3-209ENST00000555609 HIST1H2BNQ99877 126 aa13.63□□□□□ -0.23
TUBB3-209ENST00000555609 HIST1H2BMQ99879 126 aa13.63□□□□□ -0.23
TUBB3-209ENST00000555609 TMEM147Q9BVK8 224 aa13.63□□□□□ -0.23
TUBB3-209ENST00000555609 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.63□□□□□ -0.23
TUBB3-209ENST00000555609 ZFHX2Q9C0A1 2572 aaPredicted RBP13.63□□□□□ -0.23
TUBB3-209ENST00000555609 TRGV5A0A0B4J1U4 118 aa13.63□□□□□ -0.23
TUBB3-209ENST00000555609 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.63□□□□□ -0.23
TUBB3-209ENST00000555609 C1QTNF9BB2RNN3 333 aa13.63□□□□□ -0.23
TUBB3-209ENST00000555609 TMEM250H0YL14 139 aa13.63□□□□□ -0.23
TUBB3-209ENST00000555609 PPP1R2P9O14990 202 aa13.63□□□□□ -0.23
TUBB3-209ENST00000555609 GATCO43716 136 aaKnown RBP13.63□□□□□ -0.23
TUBB3-209ENST00000555609 SOX15O60248 233 aa13.63□□□□□ -0.23
TUBB3-209ENST00000555609 UBE2NP61088 152 aaKnown RBP13.63□□□□□ -0.23
TUBB3-209ENST00000555609 EIF4EBP1Q13541 118 aaPredicted RBP13.63□□□□□ -0.23
TUBB3-209ENST00000555609 INO80CQ6PI98 192 aaPredicted RBP13.63□□□□□ -0.23
TUBB3-209ENST00000555609 PRR7Q8TB68 274 aa13.63□□□□□ -0.23
TUBB3-209ENST00000555609 FAM216AQ8WUB2 273 aa13.63□□□□□ -0.23
TUBB3-209ENST00000555609 BCL2L14Q9BZR8 327 aa13.63□□□□□ -0.23
TUBB3-209ENST00000555609 RBKSQ9H477 322 aa13.63□□□□□ -0.23
TUBB3-209ENST00000555609 C12orf49Q9H741 205 aa13.63□□□□□ -0.23
TUBB3-209ENST00000555609 VSIRQ9H7M9 311 aa13.63□□□□□ -0.23
TUBB3-209ENST00000555609 CTXND1A0A1B0GTU2 59 aa13.62□□□□□ -0.23
TUBB3-209ENST00000555609 CEBPZOSA8MTT3 80 aa13.62□□□□□ -0.23
TUBB3-209ENST00000555609 RAB29O14966 203 aa13.62□□□□□ -0.23
TUBB3-209ENST00000555609 ZNF737O75373 536 aa13.62□□□□□ -0.23
TUBB3-209ENST00000555609 YIF1AO95070 293 aa13.62□□□□□ -0.23
TUBB3-209ENST00000555609 PTBP3O95758 552 aaKnown RBP13.62□□□□□ -0.23
TUBB3-209ENST00000555609 HAND1O96004 215 aa13.62□□□□□ -0.23
TUBB3-209ENST00000555609 WDR25Q64LD2 544 aaPredicted RBP13.62□□□□□ -0.23
TUBB3-209ENST00000555609 WDR31Q8NA23 367 aa13.62□□□□□ -0.23
TUBB3-209ENST00000555609 LHX4Q969G2 390 aa13.62□□□□□ -0.23
TUBB3-209ENST00000555609 MANBALQ9NQG1 85 aa13.62□□□□□ -0.23
TUBB3-209ENST00000555609 URGCP-MRPS24S4R325 110 aa13.62□□□□□ -0.23
TUBB3-209ENST00000555609 LRRC30A6NM36 301 aa13.61□□□□□ -0.23
TUBB3-209ENST00000555609 ZNF66Q6ZN08 573 aa13.61□□□□□ -0.23
TUBB3-209ENST00000555609 CYP2G1PQ6ZSU1 146 aa13.61□□□□□ -0.23
TUBB3-209ENST00000555609 PRR18Q8N4B5 295 aa13.61□□□□□ -0.23
TUBB3-209ENST00000555609 TAAR6Q96RI8 345 aa13.61□□□□□ -0.23
TUBB3-209ENST00000555609 OR2J1Q9GZK6 312 aa13.61□□□□□ -0.23
TUBB3-209ENST00000555609 OR51B6Q9H340 312 aa13.61□□□□□ -0.23
TUBB3-209ENST00000555609 IFITM10A6NMD0 228 aa13.61□□□□□ -0.23
TUBB3-209ENST00000555609 CDIPTO14735 213 aa13.61□□□□□ -0.23
TUBB3-209ENST00000555609 CLDN14O95500 239 aa13.61□□□□□ -0.23
TUBB3-209ENST00000555609 CLDN1O95832 211 aa13.61□□□□□ -0.23
TUBB3-209ENST00000555609 TRGC2P03986 189 aa13.61□□□□□ -0.23
TUBB3-209ENST00000555609 PSMB3P49720 205 aa13.61□□□□□ -0.23
TUBB3-209ENST00000555609 C3AR1Q16581 482 aa13.61□□□□□ -0.23
TUBB3-209ENST00000555609 TMEM241Q24JQ0 296 aa13.61□□□□□ -0.23
TUBB3-209ENST00000555609 SPATA46Q5T0L3 261 aa13.61□□□□□ -0.23
TUBB3-209ENST00000555609 KBTBD11O94819 623 aa13.6□□□□□ -0.23
TUBB3-209ENST00000555609 IL2RGP31785 369 aa13.6□□□□□ -0.23
TUBB3-209ENST00000555609 MEF2BQ02080 365 aaPredicted RBP13.6□□□□□ -0.23
TUBB3-209ENST00000555609 VWC2Q2TAL6 325 aa13.6□□□□□ -0.23
TUBB3-209ENST00000555609 TRAT1Q6PIZ9 186 aa13.6□□□□□ -0.23
TUBB3-209ENST00000555609 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.6□□□□□ -0.23
TUBB3-209ENST00000555609 TGIF2LYQ8IUE0 185 aa13.6□□□□□ -0.23
TUBB3-209ENST00000555609 TMEM178AQ8NBL3 297 aa13.6□□□□□ -0.23
TUBB3-209ENST00000555609 SLC25A40Q8TBP6 338 aa13.6□□□□□ -0.23
TUBB3-209ENST00000555609 LOXL4Q96JB6 756 aa13.6□□□□□ -0.23
TUBB3-209ENST00000555609 PYGO2Q9BRQ0 406 aa13.6□□□□□ -0.23
TUBB3-209ENST00000555609 SMOC1Q9H4F8 434 aa13.6□□□□□ -0.23
TUBB3-209ENST00000555609 ZDHHC11Q9H8X9 412 aa13.6□□□□□ -0.23
TUBB3-209ENST00000555609 TRAV39A0A0B4J263 110 aa13.59□□□□□ -0.23
TUBB3-209ENST00000555609 UBE2L5PA0A1B0GUS4 154 aa13.59□□□□□ -0.23
TUBB3-209ENST00000555609 ZNF729A6NN14 1252 aaPredicted RBP13.59□□□□□ -0.23
TUBB3-209ENST00000555609 IFNL4K9M1U5 179 aa13.59□□□□□ -0.23
TUBB3-209ENST00000555609 FGF8P55075 233 aaPredicted RBP13.59□□□□□ -0.23
TUBB3-209ENST00000555609 SSX7Q7RTT5 188 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms