RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 BET1O15155 118 aa9.83□□□□□ -0.84
SYNE2-214ENST00000554928 HSPA12AO43301 675 aa9.83□□□□□ -0.84
SYNE2-214ENST00000554928 LANCL1O43813 399 aa9.83□□□□□ -0.84
SYNE2-214ENST00000554928 EIF4EP06730 217 aaKnown RBP9.83□□□□□ -0.84
SYNE2-214ENST00000554928 GSTP1P09211 210 aaKnown RBP9.83□□□□□ -0.84
SYNE2-214ENST00000554928 TMEM11P17152 192 aa9.83□□□□□ -0.84
SYNE2-214ENST00000554928 IL3RAP26951 378 aa9.83□□□□□ -0.84
SYNE2-214ENST00000554928 SMCPP49901 116 aaPredicted RBP9.83□□□□□ -0.84
SYNE2-214ENST00000554928 MRPS15P82914 257 aaKnown RBP9.83□□□□□ -0.84
SYNE2-214ENST00000554928 LSAMPQ13449 338 aa9.83□□□□□ -0.84
SYNE2-214ENST00000554928 EBI3Q14213 229 aa9.83□□□□□ -0.84
SYNE2-214ENST00000554928 ABCA11PQ4W5N1 156 aa9.83□□□□□ -0.84
SYNE2-214ENST00000554928 GLDNQ6ZMI3 551 aaPredicted RBP9.83□□□□□ -0.84
SYNE2-214ENST00000554928 ZNF833PQ6ZTB9 187 aa9.83□□□□□ -0.84
SYNE2-214ENST00000554928 THNSL2Q86YJ6 484 aa9.83□□□□□ -0.84
SYNE2-214ENST00000554928 CLVS1Q8IUQ0 354 aaPredicted RBP9.83□□□□□ -0.84
SYNE2-214ENST00000554928 Q8N6K4 173 aa9.83□□□□□ -0.84
SYNE2-214ENST00000554928 GVQW1Q8N7I0 195 aa9.83□□□□□ -0.84
SYNE2-214ENST00000554928 SAMD12Q8N8I0 201 aa9.83□□□□□ -0.84
SYNE2-214ENST00000554928 C11orf44Q8N8P7 122 aa9.83□□□□□ -0.84
SYNE2-214ENST00000554928 OR4A4PQ8NGN8 299 aa9.83□□□□□ -0.84
SYNE2-214ENST00000554928 ST6GALNAC5Q9BVH7 336 aa9.83□□□□□ -0.84
SYNE2-214ENST00000554928 DCSTAMPQ9H295 470 aa9.83□□□□□ -0.84
SYNE2-214ENST00000554928 AUNIPQ9H7T9 357 aa9.83□□□□□ -0.84
SYNE2-214ENST00000554928 RDH8Q9NYR8 311 aa9.83□□□□□ -0.84
SYNE2-214ENST00000554928 COMMD3Q9UBI1 195 aa9.83□□□□□ -0.84
SYNE2-214ENST00000554928 TRBV6-7A0A0A0MS04 114 aa9.82□□□□□ -0.84
SYNE2-214ENST00000554928 MEIS3P1A6NDR6 274 aa9.82□□□□□ -0.84
SYNE2-214ENST00000554928 RGS11O94810 467 aa9.82□□□□□ -0.84
SYNE2-214ENST00000554928 FAM106CPP0CH98 169 aa9.82□□□□□ -0.84
SYNE2-214ENST00000554928 VSIG10L2P0DP72 767 aa9.82□□□□□ -0.84
SYNE2-214ENST00000554928 DTYMKP23919 212 aa9.82□□□□□ -0.84
SYNE2-214ENST00000554928 ZBTB25P24278 435 aa9.82□□□□□ -0.84
SYNE2-214ENST00000554928 TALDO1P37837 337 aa9.82□□□□□ -0.84
SYNE2-214ENST00000554928 ARHGDIBP52566 201 aa9.82□□□□□ -0.84
SYNE2-214ENST00000554928 F2RL1P55085 397 aa9.82□□□□□ -0.84
SYNE2-214ENST00000554928 GNG2P59768 71 aa9.82□□□□□ -0.84
SYNE2-214ENST00000554928 SHISA2Q6UWI4 295 aa9.82□□□□□ -0.84
SYNE2-214ENST00000554928 C10orf99Q6UWK7 81 aa9.82□□□□□ -0.84
SYNE2-214ENST00000554928 CROCCP3Q8IVE0 287 aa9.82□□□□□ -0.84
SYNE2-214ENST00000554928 KLHDC1Q8N7A1 406 aa9.82□□□□□ -0.84
SYNE2-214ENST00000554928 CITED1Q99966 193 aa9.82□□□□□ -0.84
SYNE2-214ENST00000554928 PRSS22Q9GZN4 317 aa9.82□□□□□ -0.84
SYNE2-214ENST00000554928 ABCG5Q9H222 651 aa9.82□□□□□ -0.84
SYNE2-214ENST00000554928 PLSCR3Q9NRY6 295 aa9.82□□□□□ -0.84
SYNE2-214ENST00000554928 MGAT4AQ9UM21 535 aa9.82□□□□□ -0.84
SYNE2-214ENST00000554928 MOB4Q9Y3A3 225 aa9.82□□□□□ -0.84
SYNE2-214ENST00000554928 LINC01548A6NM66 108 aa9.81□□□□□ -0.84
SYNE2-214ENST00000554928 HPGDSO60760 199 aa9.81□□□□□ -0.84
SYNE2-214ENST00000554928 LPLP06858 475 aa9.81□□□□□ -0.84
SYNE2-214ENST00000554928 CT45A6P0DMU7 189 aa9.81□□□□□ -0.84
SYNE2-214ENST00000554928 CT45A5P0DMU8 189 aa9.81□□□□□ -0.84
SYNE2-214ENST00000554928 CT45A7P0DMV0 189 aa9.81□□□□□ -0.84
SYNE2-214ENST00000554928 CNTFRP26992 372 aa9.81□□□□□ -0.84
SYNE2-214ENST00000554928 CD1BP29016 333 aa9.81□□□□□ -0.84
SYNE2-214ENST00000554928 TAS2R20P59543 309 aa9.81□□□□□ -0.84
SYNE2-214ENST00000554928 KIR2DS1Q14954 304 aa9.81□□□□□ -0.84
SYNE2-214ENST00000554928 PNLIPRP3Q17RR3 467 aa9.81□□□□□ -0.84
SYNE2-214ENST00000554928 C9orf152Q5JTZ5 239 aa9.81□□□□□ -0.84
SYNE2-214ENST00000554928 UBE2NLQ5JXB2 153 aa9.81□□□□□ -0.84
SYNE2-214ENST00000554928 C11orf88Q6PI97 169 aa9.81□□□□□ -0.84
SYNE2-214ENST00000554928 Q6ZS49 121 aa9.81□□□□□ -0.84
SYNE2-214ENST00000554928 C16orf82Q7Z2V1 217 aa9.81□□□□□ -0.84
SYNE2-214ENST00000554928 C5orf56Q8N8D9 126 aa9.81□□□□□ -0.84
SYNE2-214ENST00000554928 DRAXINQ8NBI3 349 aaPredicted RBP9.81□□□□□ -0.84
SYNE2-214ENST00000554928 OR2T6Q8NHC8 308 aa9.81□□□□□ -0.84
SYNE2-214ENST00000554928 WIPF2Q8TF74 440 aaPredicted RBP9.81□□□□□ -0.84
SYNE2-214ENST00000554928 TOLLIPQ9H0E2 274 aa9.81□□□□□ -0.84
SYNE2-214ENST00000554928 J3QRK9 145 aa9.8□□□□□ -0.84
SYNE2-214ENST00000554928 ITGB1BP1O14713 200 aa9.8□□□□□ -0.84
SYNE2-214ENST00000554928 XRCC3O43542 346 aa9.8□□□□□ -0.84
SYNE2-214ENST00000554928 SCGNO76038 276 aa9.8□□□□□ -0.84
SYNE2-214ENST00000554928 OR8U9P0C7N5 309 aa9.8□□□□□ -0.84
SYNE2-214ENST00000554928 RPL5P46777 297 aaKnown RBP9.8□□□□□ -0.84
SYNE2-214ENST00000554928 SRSF7Q16629 238 aaKnown RBP eCLIP9.8□□□□□ -0.84
SYNE2-214ENST00000554928 FAM131AQ6UXB0 335 aa9.8□□□□□ -0.84
SYNE2-214ENST00000554928 H1FOOQ8IZA3 346 aaPredicted RBP9.8□□□□□ -0.84
SYNE2-214ENST00000554928 Q8N9W7 124 aa9.8□□□□□ -0.84
SYNE2-214ENST00000554928 OR8U1Q8NH10 309 aa9.8□□□□□ -0.84
SYNE2-214ENST00000554928 SNAPC3Q92966 411 aa9.8□□□□□ -0.84
SYNE2-214ENST00000554928 WNT10AQ9GZT5 417 aa9.8□□□□□ -0.84
SYNE2-214ENST00000554928 DIABLOQ9NR28 239 aa9.8□□□□□ -0.84
SYNE2-214ENST00000554928 A0A0A6YYH2 397 aa9.79□□□□□ -0.84
SYNE2-214ENST00000554928 IGKV1D-13A0A0B4J2D9 117 aa9.79□□□□□ -0.84
SYNE2-214ENST00000554928 A6NJ64 397 aa9.79□□□□□ -0.84
SYNE2-214ENST00000554928 RAB29O14966 203 aa9.79□□□□□ -0.84
SYNE2-214ENST00000554928 TXNL1O43396 289 aa9.79□□□□□ -0.84
SYNE2-214ENST00000554928 TMEM127O75204 238 aa9.79□□□□□ -0.84
SYNE2-214ENST00000554928 MOSP00540 346 aa9.79□□□□□ -0.84
SYNE2-214ENST00000554928 HLA-DQB1P01920 261 aa9.79□□□□□ -0.84
SYNE2-214ENST00000554928 IGKV1-13P0DP09 117 aa9.79□□□□□ -0.84
SYNE2-214ENST00000554928 CD28P10747 220 aa9.79□□□□□ -0.84
SYNE2-214ENST00000554928 ELK1P19419 428 aa9.79□□□□□ -0.84
SYNE2-214ENST00000554928 NFYAP23511 347 aaPredicted RBP9.79□□□□□ -0.84
SYNE2-214ENST00000554928 VDAC2P45880 294 aaPredicted RBP9.79□□□□□ -0.84
SYNE2-214ENST00000554928 RORCP51449 518 aa9.79□□□□□ -0.84
SYNE2-214ENST00000554928 ARL6IP1Q15041 203 aa9.79□□□□□ -0.84
SYNE2-214ENST00000554928 ZNF383Q8NA42 475 aa9.79□□□□□ -0.84
SYNE2-214ENST00000554928 OR2T10Q8NGZ9 312 aa9.79□□□□□ -0.84
SYNE2-214ENST00000554928 OR10J5Q8NHC4 309 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms