RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 OR5B21A6NL26 309 aa13.36□□□□□ -0.27
SYNE3-203ENST00000554873 C2CD4DB7Z1M9 353 aa13.36□□□□□ -0.27
SYNE3-203ENST00000554873 PTGDSP41222 190 aa13.36□□□□□ -0.27
SYNE3-203ENST00000554873 SYT13Q7L8C5 426 aa13.36□□□□□ -0.27
SYNE3-203ENST00000554873 BAGE3Q86Y29 109 aa13.36□□□□□ -0.27
SYNE3-203ENST00000554873 BAGE2Q86Y30 109 aa13.36□□□□□ -0.27
SYNE3-203ENST00000554873 C20orf196Q8IYI0 205 aa13.36□□□□□ -0.27
SYNE3-203ENST00000554873 TCTEX1D1Q8N7M0 179 aa13.36□□□□□ -0.27
SYNE3-203ENST00000554873 RNF138Q8WVD3 245 aa13.36□□□□□ -0.27
SYNE3-203ENST00000554873 IL19Q9UHD0 177 aa13.36□□□□□ -0.27
SYNE3-203ENST00000554873 ASCC3Q8N3C0 2202 aaKnown RBP13.36□□□□□ -0.27
SYNE3-203ENST00000554873 MLNRO43193 412 aa13.36□□□□□ -0.27
SYNE3-203ENST00000554873 SERPINA7P05543 415 aa13.36□□□□□ -0.27
SYNE3-203ENST00000554873 HIST3H3Q16695 136 aa13.36□□□□□ -0.27
SYNE3-203ENST00000554873 SH3BGRL2Q9UJC5 107 aa13.36□□□□□ -0.27
SYNE3-203ENST00000554873 RNF114Q9Y508 228 aa13.36□□□□□ -0.27
SYNE3-203ENST00000554873 PRUNE2Q8WUY3 3088 aa13.36□□□□□ -0.27
SYNE3-203ENST00000554873 A0A1W2PRS3 328 aa13.35□□□□□ -0.27
SYNE3-203ENST00000554873 DUX1O43812 170 aa13.35□□□□□ -0.27
SYNE3-203ENST00000554873 NMSQ5H8A3 153 aa13.35□□□□□ -0.27
SYNE3-203ENST00000554873 OR10G3Q8NGC4 313 aa13.35□□□□□ -0.27
SYNE3-203ENST00000554873 BCL2L2Q92843 193 aaPredicted RBP13.35□□□□□ -0.27
SYNE3-203ENST00000554873 Q96M66 194 aa13.35□□□□□ -0.27
SYNE3-203ENST00000554873 OXGR1Q96P68 337 aa13.35□□□□□ -0.27
SYNE3-203ENST00000554873 MRPL27Q9P0M9 148 aaKnown RBP13.35□□□□□ -0.27
SYNE3-203ENST00000554873 IGHV2-26A0A0B4J1V2 119 aa13.35□□□□□ -0.27
SYNE3-203ENST00000554873 NXPH3O95157 252 aa13.35□□□□□ -0.27
SYNE3-203ENST00000554873 NRASP01111 189 aa13.35□□□□□ -0.27
SYNE3-203ENST00000554873 KRASP01116 189 aa13.35□□□□□ -0.27
SYNE3-203ENST00000554873 FCGR2AP12318 317 aa13.35□□□□□ -0.27
SYNE3-203ENST00000554873 GRB2P62993 217 aaKnown RBP13.35□□□□□ -0.27
SYNE3-203ENST00000554873 TLE1Q04724 770 aa13.35□□□□□ -0.27
SYNE3-203ENST00000554873 KIAA2026Q5HYC2 2103 aa13.35□□□□□ -0.27
SYNE3-203ENST00000554873 OR5B3Q8NH48 314 aa13.35□□□□□ -0.27
SYNE3-203ENST00000554873 ZNF430Q9H8G1 570 aaPredicted RBP13.35□□□□□ -0.27
SYNE3-203ENST00000554873 FAHP16930 419 aa13.35□□□□□ -0.27
SYNE3-203ENST00000554873 UCP1P25874 307 aa13.35□□□□□ -0.27
SYNE3-203ENST00000554873 TMEM267Q0VDI3 215 aaPredicted RBP13.35□□□□□ -0.27
SYNE3-203ENST00000554873 Q0VG73 95 aa13.35□□□□□ -0.27
SYNE3-203ENST00000554873 RSPO4Q2I0M5 234 aaPredicted RBP13.35□□□□□ -0.27
SYNE3-203ENST00000554873 FAM69BQ5VUD6 431 aa13.35□□□□□ -0.27
SYNE3-203ENST00000554873 PRR27Q6MZM9 219 aa13.35□□□□□ -0.27
SYNE3-203ENST00000554873 PNKDQ8N490 385 aa13.35□□□□□ -0.27
SYNE3-203ENST00000554873 F5H5K5 113 aa13.34□□□□□ -0.27
SYNE3-203ENST00000554873 IGLV3-1P01715 115 aa13.34□□□□□ -0.27
SYNE3-203ENST00000554873 GPX1P07203 203 aa13.34□□□□□ -0.27
SYNE3-203ENST00000554873 VDAC1P21796 283 aa13.34□□□□□ -0.27
SYNE3-203ENST00000554873 APOBEC3AP31941 199 aaPredicted RBP13.34□□□□□ -0.27
SYNE3-203ENST00000554873 SGMS2Q8NHU3 365 aa13.34□□□□□ -0.27
SYNE3-203ENST00000554873 NEIL1Q96FI4 390 aaPredicted RBP13.34□□□□□ -0.27
SYNE3-203ENST00000554873 METTL7AQ9H8H3 244 aa13.34□□□□□ -0.27
SYNE3-203ENST00000554873 IGLC7A0M8Q6 106 aa13.34□□□□□ -0.27
SYNE3-203ENST00000554873 H3BP45 60 aa13.34□□□□□ -0.27
SYNE3-203ENST00000554873 GDF9O60383 454 aa13.34□□□□□ -0.27
SYNE3-203ENST00000554873 PIAS2O75928 621 aa13.34□□□□□ -0.27
SYNE3-203ENST00000554873 CTSSP25774 331 aa13.34□□□□□ -0.27
SYNE3-203ENST00000554873 LRRC75BQ2VPJ9 315 aa13.34□□□□□ -0.27
SYNE3-203ENST00000554873 ZNF468Q5VIY5 522 aaPredicted RBP13.34□□□□□ -0.27
SYNE3-203ENST00000554873 CADM4Q8NFZ8 388 aa13.34□□□□□ -0.27
SYNE3-203ENST00000554873 PIGTQ969N2 578 aa13.34□□□□□ -0.27
SYNE3-203ENST00000554873 FAM103A1Q9BTL3 118 aaKnown RBP13.34□□□□□ -0.27
SYNE3-203ENST00000554873 SH2D1BO14796 132 aa13.33□□□□□ -0.28
SYNE3-203ENST00000554873 PSG1P11464 419 aa13.33□□□□□ -0.28
SYNE3-203ENST00000554873 CD46P15529 392 aa13.33□□□□□ -0.28
SYNE3-203ENST00000554873 CLDN18P56856 261 aa13.33□□□□□ -0.28
SYNE3-203ENST00000554873 NXPH1P58417 271 aa13.33□□□□□ -0.28
SYNE3-203ENST00000554873 ARF6P62330 175 aa13.33□□□□□ -0.28
SYNE3-203ENST00000554873 RSPO1Q2MKA7 263 aaPredicted RBP13.33□□□□□ -0.28
SYNE3-203ENST00000554873 SNAI3Q3KNW1 292 aa13.33□□□□□ -0.28
SYNE3-203ENST00000554873 TBC1D26Q86UD7 250 aa13.33□□□□□ -0.28
SYNE3-203ENST00000554873 ZNF525Q8N782 197 aa13.33□□□□□ -0.28
SYNE3-203ENST00000554873 OR2M7Q8NG81 312 aa13.33□□□□□ -0.28
SYNE3-203ENST00000554873 IGLV3-32A0A0A0MS00 114 aa13.33□□□□□ -0.28
SYNE3-203ENST00000554873 AQP7P3A6NL99 342 aa13.33□□□□□ -0.28
SYNE3-203ENST00000554873 ZNF253O75346 499 aa13.33□□□□□ -0.28
SYNE3-203ENST00000554873 CLDN17P56750 224 aa13.33□□□□□ -0.28
SYNE3-203ENST00000554873 RHBDD2Q6NTF9 364 aa13.33□□□□□ -0.28
SYNE3-203ENST00000554873 SMRP1Q8NCR6 262 aa13.33□□□□□ -0.28
SYNE3-203ENST00000554873 OR2M3Q8NG83 312 aa13.33□□□□□ -0.28
SYNE3-203ENST00000554873 UBE2ZQ9H832 354 aaPredicted RBP13.33□□□□□ -0.28
SYNE3-203ENST00000554873 IGLV3-12A0A075B6K2 115 aa13.32□□□□□ -0.28
SYNE3-203ENST00000554873 PIGLQ9Y2B2 252 aa13.32□□□□□ -0.28
SYNE3-203ENST00000554873 DHRS3O75911 302 aa13.32□□□□□ -0.28
SYNE3-203ENST00000554873 PPYP01298 95 aa13.32□□□□□ -0.28
SYNE3-203ENST00000554873 RPP25LQ8N5L8 163 aaKnown RBP13.32□□□□□ -0.28
SYNE3-203ENST00000554873 RAB40CQ96S21 281 aa13.32□□□□□ -0.28
SYNE3-203ENST00000554873 MRPL18Q9H0U6 180 aaKnown RBP13.32□□□□□ -0.28
SYNE3-203ENST00000554873 TBL2Q9Y4P3 447 aaKnown RBP13.32□□□□□ -0.28
SYNE3-203ENST00000554873 MLF1P58340 268 aa13.31□□□□□ -0.28
SYNE3-203ENST00000554873 SPIN3Q5JUX0 258 aa13.31□□□□□ -0.28
SYNE3-203ENST00000554873 PHYHD1Q5SRE7 291 aa13.31□□□□□ -0.28
SYNE3-203ENST00000554873 MYPOPQ86VE0 399 aaPredicted RBP13.31□□□□□ -0.28
SYNE3-203ENST00000554873 ZIC4Q8N9L1 334 aa13.31□□□□□ -0.28
SYNE3-203ENST00000554873 NRN1Q9NPD7 142 aa13.31□□□□□ -0.28
SYNE3-203ENST00000554873 GLB1P16278 677 aa13.31□□□□□ -0.28
SYNE3-203ENST00000554873 CBLN1P23435 193 aa13.31□□□□□ -0.28
SYNE3-203ENST00000554873 GABRA2P47869 451 aa13.31□□□□□ -0.28
SYNE3-203ENST00000554873 LRRC10Q5BKY1 277 aa13.31□□□□□ -0.28
SYNE3-203ENST00000554873 ZNF295-AS1Q8N0V1 137 aa13.31□□□□□ -0.28
SYNE3-203ENST00000554873 ZNF596Q8TC21 504 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms